RNA–Protein interactions for RNA: ENST00000394225.6

NDUFC1-202, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

TSL 2

Gene NDUFC1, Length 664 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-202ENST00000394225 PREX2Q70Z35 1606 aa23.73■■□□□ 1.39
NDUFC1-202ENST00000394225 KANK4Q5T7N3 995 aaPredicted RBP23.73■■□□□ 1.39
NDUFC1-202ENST00000394225 CCNB3Q8WWL7 1395 aa23.73■■□□□ 1.39
NDUFC1-202ENST00000394225 NCOA2Q15596 1464 aa23.72■■□□□ 1.39
NDUFC1-202ENST00000394225 KDM6BO15054 1643 aa23.72■■□□□ 1.39
NDUFC1-202ENST00000394225 CDC42BPAQ5VT25 1732 aa23.71■■□□□ 1.39
NDUFC1-202ENST00000394225 ARHGAP5Q13017 1502 aa23.71■■□□□ 1.39
NDUFC1-202ENST00000394225 EFCAB2Q5VUJ9 269 aa23.71■■□□□ 1.39
NDUFC1-202ENST00000394225 CDC42BPBQ9Y5S2 1711 aa23.69■■□□□ 1.38
NDUFC1-202ENST00000394225 ITSN2Q9NZM3 1697 aa23.69■■□□□ 1.38
NDUFC1-202ENST00000394225 GPATCH8Q9UKJ3 1502 aaKnown RBP23.69■■□□□ 1.38
NDUFC1-202ENST00000394225 AKNAQ7Z591 1439 aa23.67■■□□□ 1.38
NDUFC1-202ENST00000394225 CFDP1Q9UEE9 299 aaPredicted RBP23.63■■□□□ 1.37
NDUFC1-202ENST00000394225 ADGRL1O94910 1474 aa23.62■■□□□ 1.37
NDUFC1-202ENST00000394225 COL17A1Q9UMD9 1497 aaPredicted RBP23.61■■□□□ 1.37
NDUFC1-202ENST00000394225 DENND4BO75064 1496 aaPredicted RBP23.59■■□□□ 1.37
NDUFC1-202ENST00000394225 MYOM3Q5VTT5 1437 aa23.57■■□□□ 1.36
NDUFC1-202ENST00000394225 SCAPERQ9BY12 1400 aa23.57■■□□□ 1.36
NDUFC1-202ENST00000394225 PLEKHH2Q8IVE3 1493 aa23.56■■□□□ 1.36
NDUFC1-202ENST00000394225 ABCC1P33527 1531 aa23.56■■□□□ 1.36
NDUFC1-202ENST00000394225 ZNF777Q9ULD5 760 aaPredicted RBP23.56■■□□□ 1.36
NDUFC1-202ENST00000394225 SAMD9LQ8IVG5 1584 aa23.55■■□□□ 1.36
NDUFC1-202ENST00000394225 MIA2Q96PC5 1412 aa23.53■■□□□ 1.36
NDUFC1-202ENST00000394225 POGZQ7Z3K3 1410 aa23.52■■□□□ 1.36
NDUFC1-202ENST00000394225 RICTORQ6R327 1708 aa23.52■■□□□ 1.36
NDUFC1-202ENST00000394225 KIAA1107Q9UPP5 1409 aa23.51■■□□□ 1.35
NDUFC1-202ENST00000394225 RAPGEF3O95398 923 aa23.51■■□□□ 1.35
NDUFC1-202ENST00000394225 FRMPD1Q5SYB0 1578 aa23.51■■□□□ 1.35
NDUFC1-202ENST00000394225 ZNF518AQ6AHZ1 1483 aa23.5■■□□□ 1.35
NDUFC1-202ENST00000394225 SYCP2Q9BX26 1530 aa23.49■■□□□ 1.35
NDUFC1-202ENST00000394225 CAMSAP2Q08AD1 1489 aa23.48■■□□□ 1.35
NDUFC1-202ENST00000394225 ZMYM4Q5VZL5 1548 aa23.47■■□□□ 1.35
NDUFC1-202ENST00000394225 ARHGEF12Q9NZN5 1544 aa23.47■■□□□ 1.35
NDUFC1-202ENST00000394225 FGD6Q6ZV73 1430 aa23.45■■□□□ 1.34
NDUFC1-202ENST00000394225 ZNF644Q9H582 1327 aaPredicted RBP23.45■■□□□ 1.34
NDUFC1-202ENST00000394225 PPARGC1BQ86YN6 1023 aaKnown RBP23.45■■□□□ 1.34
NDUFC1-202ENST00000394225 KDM5CP41229 1560 aa23.44■■□□□ 1.34
NDUFC1-202ENST00000394225 MAGI2Q86UL8 1455 aa23.43■■□□□ 1.34
NDUFC1-202ENST00000394225 TRAPPC8Q9Y2L5 1435 aa23.43■■□□□ 1.34
NDUFC1-202ENST00000394225 PTPN23Q9H3S7 1636 aa23.42■■□□□ 1.34
NDUFC1-202ENST00000394225 HNRNPMP52272 730 aaKnown RBP eCLIP23.42■■□□□ 1.34
NDUFC1-202ENST00000394225 RSPH4AQ5TD94 716 aa23.41■■□□□ 1.34
NDUFC1-202ENST00000394225 AFAP1Q8N556 730 aa23.41■■□□□ 1.34
NDUFC1-202ENST00000394225 MBD5Q9P267 1494 aa23.4■■□□□ 1.34
NDUFC1-202ENST00000394225 TCOF1Q13428 1488 aaKnown RBP23.39■■□□□ 1.34
NDUFC1-202ENST00000394225 ARHGEF5Q12774 1597 aa23.39■■□□□ 1.33
NDUFC1-202ENST00000394225 HECW2Q9P2P5 1572 aa23.39■■□□□ 1.33
NDUFC1-202ENST00000394225 CCDC141Q6ZP82 1450 aa23.38■■□□□ 1.33
NDUFC1-202ENST00000394225 ZFYVE16Q7Z3T8 1539 aa23.38■■□□□ 1.33
NDUFC1-202ENST00000394225 MLH3Q9UHC1 1453 aa23.37■■□□□ 1.33
NDUFC1-202ENST00000394225 ARHGEF40Q8TER5 1519 aa23.37■■□□□ 1.33
NDUFC1-202ENST00000394225 MYT1LQ9UL68 1186 aa23.35■■□□□ 1.33
NDUFC1-202ENST00000394225 SPAG9O60271 1321 aaKnown RBP23.33■■□□□ 1.33
NDUFC1-202ENST00000394225 YEATS2Q9ULM3 1422 aa23.31■■□□□ 1.32
NDUFC1-202ENST00000394225 INO80Q9ULG1 1556 aaPredicted RBP23.31■■□□□ 1.32
NDUFC1-202ENST00000394225 ATP7AQ04656 1500 aa23.3■■□□□ 1.32
NDUFC1-202ENST00000394225 TSPY4P0CV99 314 aa23.3■■□□□ 1.32
NDUFC1-202ENST00000394225 TSPY10P0CW01 314 aa23.3■■□□□ 1.32
NDUFC1-202ENST00000394225 KIDINS220Q9ULH0 1771 aa23.29■■□□□ 1.32
NDUFC1-202ENST00000394225 RTEL1-TNFRSF6BF6WH68 1400 aa23.29■■□□□ 1.32
NDUFC1-202ENST00000394225 ADRA2BP18089 450 aa23.29■■□□□ 1.32
NDUFC1-202ENST00000394225 FAM50AQ14320 339 aaKnown RBP23.29■■□□□ 1.32
NDUFC1-202ENST00000394225 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
NDUFC1-202ENST00000394225 DNMT1P26358 1616 aaKnown RBP23.28■■□□□ 1.32
NDUFC1-202ENST00000394225 ATP10AO60312 1499 aa23.27■■□□□ 1.32
NDUFC1-202ENST00000394225 DIP2CQ9Y2E4 1556 aa23.27■■□□□ 1.32
NDUFC1-202ENST00000394225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.27■■□□□ 1.319e-11■■■□□ 15.4
NDUFC1-202ENST00000394225 ABCA6Q8N139 1617 aa23.26■■□□□ 1.31
NDUFC1-202ENST00000394225 MAST1Q9Y2H9 1570 aa23.26■■□□□ 1.31
NDUFC1-202ENST00000394225 DAPK1P53355 1430 aa23.25■■□□□ 1.31
NDUFC1-202ENST00000394225 C9orf84Q5VXU9 1444 aa23.25■■□□□ 1.31
NDUFC1-202ENST00000394225 RRBP1Q9P2E9 1410 aaKnown RBP23.25■■□□□ 1.31
NDUFC1-202ENST00000394225 SHANK2Q9UPX8 1470 aa23.25■■□□□ 1.31
NDUFC1-202ENST00000394225 CROCC2H7BZ55 1655 aa23.25■■□□□ 1.31
NDUFC1-202ENST00000394225 ABCC5O15440 1437 aa23.24■■□□□ 1.31
NDUFC1-202ENST00000394225 REREQ9P2R6 1566 aa23.23■■□□□ 1.31
NDUFC1-202ENST00000394225 ADGBQ8N7X0 1667 aa23.19■■□□□ 1.3
NDUFC1-202ENST00000394225 ARID4BQ4LE39 1312 aaPredicted RBP23.17■■□□□ 1.3
NDUFC1-202ENST00000394225 PLXNC1O60486 1568 aa23.17■■□□□ 1.3
NDUFC1-202ENST00000394225 A2MP01023 1474 aa23.16■■□□□ 1.3
NDUFC1-202ENST00000394225 AGLP35573 1532 aa23.14■■□□□ 1.3
NDUFC1-202ENST00000394225 ANKRD30AQ9BXX3 1397 aa23.13■■□□□ 1.29
NDUFC1-202ENST00000394225 SIGLEC1Q9BZZ2 1709 aa23.12■■□□□ 1.29
NDUFC1-202ENST00000394225 DHX29Q7Z478 1369 aaKnown RBP23.12■■□□□ 1.29
NDUFC1-202ENST00000394225 ADGRL2O95490 1459 aa23.11■■□□□ 1.29
NDUFC1-202ENST00000394225 CHIC2Q9UKJ5 165 aa23.1■■□□□ 1.29
NDUFC1-202ENST00000394225 BCORL1Q5H9F3 1711 aa23.09■■□□□ 1.29
NDUFC1-202ENST00000394225 KIF15Q9NS87 1388 aa23.09■■□□□ 1.29
NDUFC1-202ENST00000394225 DUOX2Q9NRD8 1548 aa23.08■■□□□ 1.29
NDUFC1-202ENST00000394225 NCOA1Q15788 1441 aa23.08■■□□□ 1.28
NDUFC1-202ENST00000394225 ITGAEP38570 1179 aa23.07■■□□□ 1.28
NDUFC1-202ENST00000394225 PTPRKQ15262 1439 aa23.07■■□□□ 1.28
NDUFC1-202ENST00000394225 ROCK1Q13464 1354 aa23.06■■□□□ 1.28
NDUFC1-202ENST00000394225 RRP7BPQ9NSQ0 103 aa23.05■■□□□ 1.28
NDUFC1-202ENST00000394225 ERBINQ96RT1 1412 aa23.03■■□□□ 1.28
NDUFC1-202ENST00000394225 MLECQ14165 292 aa23.03■■□□□ 1.28
NDUFC1-202ENST00000394225 EIF2AK4Q9P2K8 1649 aaKnown RBP23.03■■□□□ 1.28
NDUFC1-202ENST00000394225 ADAMTSL3P82987 1691 aa23.03■■□□□ 1.28
NDUFC1-202ENST00000394225 KDM4FA0A1W2PPD8 638 aa22.99■■□□□ 1.27
NDUFC1-202ENST00000394225 KIF3BO15066 747 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms