RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 IPO9Q96P70 1041 aaKnown RBP21.45■■□□□ 1.02
PDZD4-202ENST00000393758 DCAF11Q8TEB1 546 aa21.43■■□□□ 1.02
PDZD4-202ENST00000393758 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
PDZD4-202ENST00000393758 CC2D1BQ5T0F9 858 aaKnown RBP21.41■■□□□ 1.02
PDZD4-202ENST00000393758 EXOC6Q8TAG9 804 aa21.39■■□□□ 1.02
PDZD4-202ENST00000393758 TSPY4P0CV99 314 aa21.37■■□□□ 1.01
PDZD4-202ENST00000393758 TSPY10P0CW01 314 aa21.37■■□□□ 1.01
PDZD4-202ENST00000393758 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.37■■□□□ 1.01
PDZD4-202ENST00000393758 NESP48681 1621 aa21.36■■□□□ 1.01
PDZD4-202ENST00000393758 RCAN3Q9UKA8 241 aa21.36■■□□□ 1.01
PDZD4-202ENST00000393758 PLIN1O60240 522 aa21.35■■□□□ 1.01
PDZD4-202ENST00000393758 ST20-MTHFSA0A0A6YYL1 179 aa21.35■■□□□ 1.01
PDZD4-202ENST00000393758 USP47Q96K76 1375 aa21.34■■□□□ 1.01
PDZD4-202ENST00000393758 POLA1P09884 1462 aaPredicted RBP21.33■■□□□ 1.01
PDZD4-202ENST00000393758 PTPN23Q9H3S7 1636 aa21.31■■□□□ 1
PDZD4-202ENST00000393758 EIF5BO60841 1220 aaKnown RBP21.29■■□□□ 1
PDZD4-202ENST00000393758 EFCAB5A4FU69 1503 aa21.27■■□□□ 1
PDZD4-202ENST00000393758 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
PDZD4-202ENST00000393758 RGS3P49796 1198 aa21.26■□□□□ 0.99
PDZD4-202ENST00000393758 SLC4A3P48751 1232 aa21.26■□□□□ 0.99
PDZD4-202ENST00000393758 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
PDZD4-202ENST00000393758 NUP155O75694 1391 aa21.25■□□□□ 0.99
PDZD4-202ENST00000393758 PDE4AP27815 886 aa21.25■□□□□ 0.99
PDZD4-202ENST00000393758 RRP1P56182 461 aaKnown RBP21.25■□□□□ 0.99
PDZD4-202ENST00000393758 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
PDZD4-202ENST00000393758 SKAP1Q86WV1 359 aa21.24■□□□□ 0.99
PDZD4-202ENST00000393758 ARXQ96QS3 562 aa21.23■□□□□ 0.99
PDZD4-202ENST00000393758 PLEKHD1A6NEE1 506 aa21.22■□□□□ 0.99
PDZD4-202ENST00000393758 CANXP27824 592 aaKnown RBP21.22■□□□□ 0.99
PDZD4-202ENST00000393758 WDR43Q15061 677 aaKnown RBP eCLIP21.22■□□□□ 0.99
PDZD4-202ENST00000393758 PNISRQ8TF01 805 aaKnown RBP21.22■□□□□ 0.99
PDZD4-202ENST00000393758 CDCA7LQ96GN5 454 aa21.22■□□□□ 0.99
PDZD4-202ENST00000393758 NCOA1Q15788 1441 aa21.22■□□□□ 0.99
PDZD4-202ENST00000393758 TCERG1O14776 1098 aaKnown RBP21.2■□□□□ 0.98
PDZD4-202ENST00000393758 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.19■□□□□ 0.98
PDZD4-202ENST00000393758 CDK13Q14004 1512 aaKnown RBP21.18■□□□□ 0.98
PDZD4-202ENST00000393758 CFAP43Q8NDM7 1665 aa21.18■□□□□ 0.98
PDZD4-202ENST00000393758 ROCK2O75116 1388 aaKnown RBP21.17■□□□□ 0.98
PDZD4-202ENST00000393758 IL27Q8NEV9 243 aa21.17■□□□□ 0.98
PDZD4-202ENST00000393758 ANKRD30BQ9BXX2 1392 aa21.17■□□□□ 0.98
PDZD4-202ENST00000393758 PPM1GO15355 546 aaPredicted RBP21.16■□□□□ 0.98
PDZD4-202ENST00000393758 ABCA10Q8WWZ4 1543 aa21.16■□□□□ 0.98
PDZD4-202ENST00000393758 MYBBP1AQ9BQG0 1328 aaKnown RBP21.16■□□□□ 0.98
PDZD4-202ENST00000393758 RALBP1Q15311 655 aa21.16■□□□□ 0.98
PDZD4-202ENST00000393758 SMG6Q86US8 1419 aaKnown RBP21.15■□□□□ 0.98
PDZD4-202ENST00000393758 EHBP1L1Q8N3D4 1523 aa21.14■□□□□ 0.98
PDZD4-202ENST00000393758 SUPT6HQ7KZ85 1726 aaKnown RBP21.14■□□□□ 0.98
PDZD4-202ENST00000393758 KIF15Q9NS87 1388 aa21.14■□□□□ 0.97
PDZD4-202ENST00000393758 HNRNPMP52272 730 aaKnown RBP eCLIP21.14■□□□□ 0.97
PDZD4-202ENST00000393758 NLRP13Q86W25 1043 aa21.14■□□□□ 0.97
PDZD4-202ENST00000393758 KTN1Q86UP2 1357 aaKnown RBP21.14■□□□□ 0.97
PDZD4-202ENST00000393758 CRBNQ96SW2 442 aa21.14■□□□□ 0.97
PDZD4-202ENST00000393758 PDS5BQ9NTI5 1447 aa21.14■□□□□ 0.97
PDZD4-202ENST00000393758 DNAJC5BQ9UF47 199 aa21.13■□□□□ 0.97
PDZD4-202ENST00000393758 DDRGK1Q96HY6 314 aa21.12■□□□□ 0.97
PDZD4-202ENST00000393758 SNAPC4Q5SXM2 1469 aa21.1■□□□□ 0.97
PDZD4-202ENST00000393758 ANO8Q9HCE9 1232 aaPredicted RBP21.1■□□□□ 0.97
PDZD4-202ENST00000393758 ANKRD30AQ9BXX3 1397 aa21.09■□□□□ 0.97
PDZD4-202ENST00000393758 DNMBPQ6XZF7 1577 aa21.08■□□□□ 0.97
PDZD4-202ENST00000393758 KNSTRNQ9Y448 316 aa21.08■□□□□ 0.96
PDZD4-202ENST00000393758 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.06■□□□□ 0.96
PDZD4-202ENST00000393758 NEUROD2Q15784 382 aa21.06■□□□□ 0.96
PDZD4-202ENST00000393758 PANK3Q9H999 370 aa21.06■□□□□ 0.96
PDZD4-202ENST00000393758 DAPK1P53355 1430 aa21.06■□□□□ 0.96
PDZD4-202ENST00000393758 EPRSP07814 1512 aaKnown RBP21.05■□□□□ 0.96
PDZD4-202ENST00000393758 RPRD2Q5VT52 1461 aaKnown RBP21.04■□□□□ 0.96
PDZD4-202ENST00000393758 GRIN2BQ13224 1484 aa21.04■□□□□ 0.96
PDZD4-202ENST00000393758 NBPF1Q3BBV0 1214 aa21.02■□□□□ 0.96
PDZD4-202ENST00000393758 CCDC146Q8IYE0 955 aa21.02■□□□□ 0.96
PDZD4-202ENST00000393758 MIA2Q96PC5 1412 aa21.01■□□□□ 0.95
PDZD4-202ENST00000393758 ABCC5O15440 1437 aa21.01■□□□□ 0.95
PDZD4-202ENST00000393758 CC2D2AQ9P2K1 1620 aa21.01■□□□□ 0.95
PDZD4-202ENST00000393758 TMF1P82094 1093 aa21■□□□□ 0.95
PDZD4-202ENST00000393758 PRG4Q92954 1404 aaPredicted RBP21■□□□□ 0.95
PDZD4-202ENST00000393758 BACH2Q9BYV9 841 aa20.99■□□□□ 0.95
PDZD4-202ENST00000393758 PRDM2Q13029 1718 aa20.99■□□□□ 0.95
PDZD4-202ENST00000393758 PDE3BQ13370 1112 aa20.99■□□□□ 0.95
PDZD4-202ENST00000393758 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
PDZD4-202ENST00000393758 UGGT2Q9NYU1 1516 aa20.98■□□□□ 0.95
PDZD4-202ENST00000393758 TNNT2P45379 298 aaPredicted RBP20.98■□□□□ 0.95
PDZD4-202ENST00000393758 FRAT1Q92837 279 aaPredicted RBP20.98■□□□□ 0.95
PDZD4-202ENST00000393758 KDM6BO15054 1643 aa20.97■□□□□ 0.95
PDZD4-202ENST00000393758 ANKRD50Q9ULJ7 1429 aa20.96■□□□□ 0.95
PDZD4-202ENST00000393758 CHGAP10645 457 aaKnown RBP20.95■□□□□ 0.94
PDZD4-202ENST00000393758 CUL7Q14999 1698 aa20.95■□□□□ 0.94
PDZD4-202ENST00000393758 BRD4O60885 1362 aaPredicted RBP20.95■□□□□ 0.94
PDZD4-202ENST00000393758 KIAA1107Q9UPP5 1409 aa20.95■□□□□ 0.94
PDZD4-202ENST00000393758 DHX29Q7Z478 1369 aaKnown RBP20.94■□□□□ 0.94
PDZD4-202ENST00000393758 C20orf194Q5TEA3 1177 aa20.94■□□□□ 0.94
PDZD4-202ENST00000393758 BRPF3Q9ULD4 1205 aa20.94■□□□□ 0.94
PDZD4-202ENST00000393758 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
PDZD4-202ENST00000393758 MAGI3Q5TCQ9 1506 aa20.93■□□□□ 0.94
PDZD4-202ENST00000393758 THOC2Q8NI27 1593 aaKnown RBP20.93■□□□□ 0.94
PDZD4-202ENST00000393758 ADAMTS8Q9UP79 889 aa20.92■□□□□ 0.94
PDZD4-202ENST00000393758 MS4A1P11836 297 aa20.92■□□□□ 0.94
PDZD4-202ENST00000393758 SLKQ9H2G2 1235 aaPredicted RBP20.92■□□□□ 0.94
PDZD4-202ENST00000393758 SPRYD3Q8NCJ5 442 aa20.91■□□□□ 0.94
PDZD4-202ENST00000393758 ARID4BQ4LE39 1312 aaPredicted RBP20.9■□□□□ 0.94
PDZD4-202ENST00000393758 HECW1Q76N89 1606 aa20.9■□□□□ 0.94
PDZD4-202ENST00000393758 NFKBIBQ15653 356 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms