RNA–Protein interactions for RNA: ENST00000393559.1

LAMB1-202, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-202ENST00000393559 CASKIN1Q8WXD9 1431 aa21.47■■□□□ 1.03
LAMB1-202ENST00000393559 SCAPERQ9BY12 1400 aa21.46■■□□□ 1.03
LAMB1-202ENST00000393559 FYCO1Q9BQS8 1478 aa21.46■■□□□ 1.03
LAMB1-202ENST00000393559 LMTK3Q96Q04 1460 aa21.45■■□□□ 1.03
LAMB1-202ENST00000393559 CFAP74Q9C0B2 1584 aa21.45■■□□□ 1.02
LAMB1-202ENST00000393559 RICTORQ6R327 1708 aa21.45■■□□□ 1.02
LAMB1-202ENST00000393559 CDK11AQ9UQ88 783 aaPredicted RBP21.44■■□□□ 1.02
LAMB1-202ENST00000393559 PLCH2O75038 1416 aa21.44■■□□□ 1.02
LAMB1-202ENST00000393559 ZFYVE16Q7Z3T8 1539 aa21.44■■□□□ 1.02
LAMB1-202ENST00000393559 APLP2Q06481 763 aa21.43■■□□□ 1.02
LAMB1-202ENST00000393559 EFCAB2Q5VUJ9 269 aa21.43■■□□□ 1.02
LAMB1-202ENST00000393559 RIMS1Q86UR5 1692 aaKnown RBP21.43■■□□□ 1.02
LAMB1-202ENST00000393559 MAGI2Q86UL8 1455 aa21.4■■□□□ 1.02
LAMB1-202ENST00000393559 MYT1LQ9UL68 1186 aa21.4■■□□□ 1.02
LAMB1-202ENST00000393559 ZMYM4Q5VZL5 1548 aa21.39■■□□□ 1.02
LAMB1-202ENST00000393559 HECW1Q76N89 1606 aa21.38■■□□□ 1.01
LAMB1-202ENST00000393559 PPARGC1BQ86YN6 1023 aaKnown RBP21.36■■□□□ 1.01
LAMB1-202ENST00000393559 AFAP1Q8N556 730 aa21.35■■□□□ 1.01
LAMB1-202ENST00000393559 TIAM1Q13009 1591 aa21.34■■□□□ 1.01
LAMB1-202ENST00000393559 MAP3K1Q13233 1512 aa21.34■■□□□ 1.01
LAMB1-202ENST00000393559 ATP10AO60312 1499 aa21.33■■□□□ 1.01
LAMB1-202ENST00000393559 CEBPAP49715 358 aaPredicted RBP21.33■■□□□ 1.01
LAMB1-202ENST00000393559 SIGLEC1Q9BZZ2 1709 aa21.32■■□□□ 1
LAMB1-202ENST00000393559 CCDC18Q5T9S5 1454 aa21.31■■□□□ 1
LAMB1-202ENST00000393559 TROQ12816 1431 aaPredicted RBP21.29■■□□□ 1
LAMB1-202ENST00000393559 C9orf84Q5VXU9 1444 aa21.29■■□□□ 1
LAMB1-202ENST00000393559 LRRIQ1Q96JM4 1722 aa21.29■■□□□ 1
LAMB1-202ENST00000393559 ARHGAP5Q13017 1502 aa21.28■■□□□ 1
LAMB1-202ENST00000393559 KANK4Q5T7N3 995 aaPredicted RBP21.27■■□□□ 1
LAMB1-202ENST00000393559 KIF14Q15058 1648 aa21.26■□□□□ 0.99
LAMB1-202ENST00000393559 CERKQ8TCT0 537 aa21.26■□□□□ 0.99
LAMB1-202ENST00000393559 ZNF518AQ6AHZ1 1483 aa21.26■□□□□ 0.99
LAMB1-202ENST00000393559 MYO5CQ9NQX4 1742 aa21.24■□□□□ 0.99
LAMB1-202ENST00000393559 LRRC9Q6ZRR7 1453 aa21.24■□□□□ 0.99
LAMB1-202ENST00000393559 ARHGEF12Q9NZN5 1544 aa21.24■□□□□ 0.99
LAMB1-202ENST00000393559 FER1L4A9Z1Z3 1794 aa21.23■□□□□ 0.99
LAMB1-202ENST00000393559 ESF1Q9H501 851 aaKnown RBP21.21■□□□□ 0.99
LAMB1-202ENST00000393559 MTUS2Q5JR59 1369 aa21.18■□□□□ 0.98
LAMB1-202ENST00000393559 ZNF777Q9ULD5 760 aaPredicted RBP21.17■□□□□ 0.98
LAMB1-202ENST00000393559 EHBP1L1Q8N3D4 1523 aa21.16■□□□□ 0.98
LAMB1-202ENST00000393559 DMRT2Q9Y5R5 561 aa21.16■□□□□ 0.98
LAMB1-202ENST00000393559 TRAPPC8Q9Y2L5 1435 aa21.15■□□□□ 0.98
LAMB1-202ENST00000393559 KDM5CP41229 1560 aa21.14■□□□□ 0.98
LAMB1-202ENST00000393559 UHRF1BP1Q6BDS2 1440 aa21.13■□□□□ 0.97
LAMB1-202ENST00000393559 MLH3Q9UHC1 1453 aa21.13■□□□□ 0.97
LAMB1-202ENST00000393559 DIP2CQ9Y2E4 1556 aa21.12■□□□□ 0.97
LAMB1-202ENST00000393559 PREX1Q8TCU6 1659 aa21.09■□□□□ 0.97
LAMB1-202ENST00000393559 CDC42BPBQ9Y5S2 1711 aa21.07■□□□□ 0.96
LAMB1-202ENST00000393559 HNRNPMP52272 730 aaKnown RBP eCLIP21.07■□□□□ 0.96
LAMB1-202ENST00000393559 TRIM26Q12899 539 aaPredicted RBP21.07■□□□□ 0.96
LAMB1-202ENST00000393559 ABCA6Q8N139 1617 aa21.07■□□□□ 0.96
LAMB1-202ENST00000393559 ABCC1P33527 1531 aa21.06■□□□□ 0.96
LAMB1-202ENST00000393559 SUPT6HQ7KZ85 1726 aaKnown RBP21.06■□□□□ 0.96
LAMB1-202ENST00000393559 PREX2Q70Z35 1606 aa21.05■□□□□ 0.96
LAMB1-202ENST00000393559 NCOA2Q15596 1464 aa21.05■□□□□ 0.96
LAMB1-202ENST00000393559 SPAG9O60271 1321 aaKnown RBP21.04■□□□□ 0.96
LAMB1-202ENST00000393559 REREQ9P2R6 1566 aa21.04■□□□□ 0.96
LAMB1-202ENST00000393559 CFDP1Q9UEE9 299 aaPredicted RBP21.02■□□□□ 0.96
LAMB1-202ENST00000393559 AGLP35573 1532 aa21.02■□□□□ 0.96
LAMB1-202ENST00000393559 CNTLNQ9NXG0 1405 aa20.99■□□□□ 0.95
LAMB1-202ENST00000393559 ITSN2Q9NZM3 1697 aa20.99■□□□□ 0.95
LAMB1-202ENST00000393559 GPATCH8Q9UKJ3 1502 aaKnown RBP20.99■□□□□ 0.95
LAMB1-202ENST00000393559 STRCQ7RTU9 1775 aa20.98■□□□□ 0.95
LAMB1-202ENST00000393559 C3P01024 1663 aa20.97■□□□□ 0.95
LAMB1-202ENST00000393559 CCNB3Q8WWL7 1395 aa20.97■□□□□ 0.95
LAMB1-202ENST00000393559 PTPRTO14522 1441 aa20.96■□□□□ 0.95
LAMB1-202ENST00000393559 SETD1BQ9UPS6 1966 aaKnown RBP20.96■□□□□ 0.95
LAMB1-202ENST00000393559 KIDINS220Q9ULH0 1771 aa20.96■□□□□ 0.95
LAMB1-202ENST00000393559 SAMD9LQ8IVG5 1584 aa20.96■□□□□ 0.95
LAMB1-202ENST00000393559 ZMYM3Q14202 1370 aa20.96■□□□□ 0.95
LAMB1-202ENST00000393559 SYCP2Q9BX26 1530 aa20.95■□□□□ 0.94
LAMB1-202ENST00000393559 GGT6Q6P531 493 aa20.95■□□□□ 0.94
LAMB1-202ENST00000393559 PCGF6Q9BYE7 350 aa20.95■□□□□ 0.94
LAMB1-202ENST00000393559 CDC42BPAQ5VT25 1732 aa20.95■□□□□ 0.94
LAMB1-202ENST00000393559 MYOM3Q5VTT5 1437 aa20.95■□□□□ 0.94
LAMB1-202ENST00000393559 RRBP1Q9P2E9 1410 aaKnown RBP20.95■□□□□ 0.94
LAMB1-202ENST00000393559 DISP3Q9P2K9 1392 aa20.94■□□□□ 0.94
LAMB1-202ENST00000393559 NCKAP5LQ9HCH0 1330 aa20.91■□□□□ 0.94
LAMB1-202ENST00000393559 NCOA1Q15788 1441 aa20.9■□□□□ 0.94
LAMB1-202ENST00000393559 FGD6Q6ZV73 1430 aa20.9■□□□□ 0.94
LAMB1-202ENST00000393559 ZNF644Q9H582 1327 aaPredicted RBP20.9■□□□□ 0.94
LAMB1-202ENST00000393559 KIAA1107Q9UPP5 1409 aa20.89■□□□□ 0.94
LAMB1-202ENST00000393559 A2MP01023 1474 aa20.88■□□□□ 0.93
LAMB1-202ENST00000393559 PLEKHH2Q8IVE3 1493 aa20.88■□□□□ 0.93
LAMB1-202ENST00000393559 NPATQ14207 1427 aa20.88■□□□□ 0.93
LAMB1-202ENST00000393559 ATP7AQ04656 1500 aa20.87■□□□□ 0.93
LAMB1-202ENST00000393559 ILDR2Q71H61 639 aa20.85■□□□□ 0.93
LAMB1-202ENST00000393559 MIA2Q96PC5 1412 aa20.85■□□□□ 0.93
LAMB1-202ENST00000393559 CAMSAP1Q5T5Y3 1602 aa20.85■□□□□ 0.93
LAMB1-202ENST00000393559 FAM50AQ14320 339 aaKnown RBP20.84■□□□□ 0.93
LAMB1-202ENST00000393559 LTBP4Q8N2S1 1624 aa20.82■□□□□ 0.92
LAMB1-202ENST00000393559 ZNF335Q9H4Z2 1342 aaPredicted RBP20.82■□□□□ 0.92
LAMB1-202ENST00000393559 PTPN23Q9H3S7 1636 aa20.82■□□□□ 0.92
LAMB1-202ENST00000393559 PKD2Q13563 968 aa20.8■□□□□ 0.92
LAMB1-202ENST00000393559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.8■□□□□ 0.92
LAMB1-202ENST00000393559 TCOF1Q13428 1488 aaKnown RBP20.8■□□□□ 0.92
LAMB1-202ENST00000393559 CLTCQ00610 1675 aaKnown RBP20.8■□□□□ 0.92
LAMB1-202ENST00000393559 PTPRKQ15262 1439 aa20.79■□□□□ 0.92
LAMB1-202ENST00000393559 UBAP1LF5GYI3 381 aa20.79■□□□□ 0.92
LAMB1-202ENST00000393559 PPP6R1Q9UPN7 881 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms