RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 CCNB3Q8WWL7 1395 aa32.59■■■□□ 2.81
CDCA4-202ENST00000392590 ADGRL1O94910 1474 aa32.58■■■□□ 2.81
CDCA4-202ENST00000392590 SCAPERQ9BY12 1400 aa32.57■■■□□ 2.8
CDCA4-202ENST00000392590 GPATCH8Q9UKJ3 1502 aaKnown RBP32.57■■■□□ 2.8
CDCA4-202ENST00000392590 KANK4Q5T7N3 995 aaPredicted RBP32.56■■■□□ 2.8
CDCA4-202ENST00000392590 LRRC9Q6ZRR7 1453 aa32.56■■■□□ 2.8
CDCA4-202ENST00000392590 CFDP1Q9UEE9 299 aaPredicted RBP32.53■■■□□ 2.8
CDCA4-202ENST00000392590 PREX2Q70Z35 1606 aa32.52■■■□□ 2.8
CDCA4-202ENST00000392590 ZNF777Q9ULD5 760 aaPredicted RBP32.52■■■□□ 2.8
CDCA4-202ENST00000392590 CDC42BPBQ9Y5S2 1711 aa32.5■■■□□ 2.79
CDCA4-202ENST00000392590 CDC42BPAQ5VT25 1732 aa32.48■■■□□ 2.79
CDCA4-202ENST00000392590 NCOA2Q15596 1464 aa32.48■■■□□ 2.79
CDCA4-202ENST00000392590 FRMPD1Q5SYB0 1578 aa32.47■■■□□ 2.79
CDCA4-202ENST00000392590 POGZQ7Z3K3 1410 aa32.45■■■□□ 2.79
CDCA4-202ENST00000392590 SUPT6HQ7KZ85 1726 aaKnown RBP32.44■■■□□ 2.78
CDCA4-202ENST00000392590 AFAP1Q8N556 730 aa32.42■■■□□ 2.78
CDCA4-202ENST00000392590 RICTORQ6R327 1708 aa32.41■■■□□ 2.78
CDCA4-202ENST00000392590 ABCC1P33527 1531 aa32.37■■■□□ 2.77
CDCA4-202ENST00000392590 ARHGEF12Q9NZN5 1544 aa32.37■■■□□ 2.77
CDCA4-202ENST00000392590 ZNF518AQ6AHZ1 1483 aa32.37■■■□□ 2.77
CDCA4-202ENST00000392590 HNRNPMP52272 730 aaKnown RBP eCLIP32.36■■■□□ 2.771e-7■■■■□ 25.8
CDCA4-202ENST00000392590 ZMYM4Q5VZL5 1548 aa32.34■■■□□ 2.77
CDCA4-202ENST00000392590 ZNF644Q9H582 1327 aaPredicted RBP32.34■■■□□ 2.77
CDCA4-202ENST00000392590 MAGI2Q86UL8 1455 aa32.34■■■□□ 2.77
CDCA4-202ENST00000392590 TRAPPC8Q9Y2L5 1435 aa32.34■■■□□ 2.77
CDCA4-202ENST00000392590 SAMD9LQ8IVG5 1584 aa32.34■■■□□ 2.77
CDCA4-202ENST00000392590 PLEKHH2Q8IVE3 1493 aa32.33■■■□□ 2.77
CDCA4-202ENST00000392590 KIAA1107Q9UPP5 1409 aa32.32■■■□□ 2.77
CDCA4-202ENST00000392590 ITSN2Q9NZM3 1697 aa32.32■■■□□ 2.76
CDCA4-202ENST00000392590 MYT1LQ9UL68 1186 aa32.32■■■□□ 2.76
CDCA4-202ENST00000392590 YEATS2Q9ULM3 1422 aa32.29■■■□□ 2.76
CDCA4-202ENST00000392590 ZFYVE16Q7Z3T8 1539 aa32.28■■■□□ 2.76
CDCA4-202ENST00000392590 SYCP2Q9BX26 1530 aa32.27■■■□□ 2.76
CDCA4-202ENST00000392590 KDM4FA0A1W2PPD8 638 aa32.26■■■□□ 2.76
CDCA4-202ENST00000392590 KDM5CP41229 1560 aa32.26■■■□□ 2.75
CDCA4-202ENST00000392590 ARHGEF40Q8TER5 1519 aa32.25■■■□□ 2.75
CDCA4-202ENST00000392590 MYOM3Q5VTT5 1437 aa32.23■■■□□ 2.75
CDCA4-202ENST00000392590 ARID4BQ4LE39 1312 aaPredicted RBP32.23■■■□□ 2.75
CDCA4-202ENST00000392590 MLH3Q9UHC1 1453 aa32.22■■■□□ 2.75
CDCA4-202ENST00000392590 AEBP2Q6ZN18 517 aaPredicted RBP32.21■■■□□ 2.75
CDCA4-202ENST00000392590 SPAG9O60271 1321 aaKnown RBP32.2■■■□□ 2.75
CDCA4-202ENST00000392590 MIA2Q96PC5 1412 aa32.2■■■□□ 2.74
CDCA4-202ENST00000392590 CAMSAP2Q08AD1 1489 aa32.18■■■□□ 2.74
CDCA4-202ENST00000392590 MBD5Q9P267 1494 aa32.18■■■□□ 2.74
CDCA4-202ENST00000392590 ATP10AO60312 1499 aa32.17■■■□□ 2.74
CDCA4-202ENST00000392590 RSPH4AQ5TD94 716 aa32.16■■■□□ 2.74
CDCA4-202ENST00000392590 HECW2Q9P2P5 1572 aa32.16■■■□□ 2.74
CDCA4-202ENST00000392590 C9orf84Q5VXU9 1444 aa32.11■■■□□ 2.73
CDCA4-202ENST00000392590 PPARGC1BQ86YN6 1023 aaKnown RBP32.1■■■□□ 2.73
CDCA4-202ENST00000392590 CCDC141Q6ZP82 1450 aa32.07■■■□□ 2.72
CDCA4-202ENST00000392590 TSPY4P0CV99 314 aa32.06■■■□□ 2.72
CDCA4-202ENST00000392590 TSPY10P0CW01 314 aa32.06■■■□□ 2.72
CDCA4-202ENST00000392590 DIP2CQ9Y2E4 1556 aa32.06■■■□□ 2.72
CDCA4-202ENST00000392590 FGD6Q6ZV73 1430 aa32.05■■■□□ 2.72
CDCA4-202ENST00000392590 KIDINS220Q9ULH0 1771 aa32.05■■■□□ 2.72
CDCA4-202ENST00000392590 ATP7AQ04656 1500 aa32.03■■■□□ 2.72
CDCA4-202ENST00000392590 ABCA6Q8N139 1617 aa32.03■■■□□ 2.72
CDCA4-202ENST00000392590 MLECQ14165 292 aa32.02■■■□□ 2.72
CDCA4-202ENST00000392590 RTEL1-TNFRSF6BF6WH68 1400 aa32.02■■■□□ 2.72
CDCA4-202ENST00000392590 ARHGEF5Q12774 1597 aa32.01■■■□□ 2.71
CDCA4-202ENST00000392590 INO80Q9ULG1 1556 aaPredicted RBP31.99■■■□□ 2.71
CDCA4-202ENST00000392590 PTPN23Q9H3S7 1636 aa31.98■■■□□ 2.71
CDCA4-202ENST00000392590 SIGLEC1Q9BZZ2 1709 aa31.97■■■□□ 2.71
CDCA4-202ENST00000392590 REREQ9P2R6 1566 aa31.97■■■□□ 2.71
CDCA4-202ENST00000392590 BCORL1Q5H9F3 1711 aa31.95■■■□□ 2.71
CDCA4-202ENST00000392590 TCOF1Q13428 1488 aaKnown RBP31.95■■■□□ 2.71
CDCA4-202ENST00000392590 FAM50AQ14320 339 aaKnown RBP31.92■■■□□ 2.7
CDCA4-202ENST00000392590 ADAMTSL3P82987 1691 aa31.92■■■□□ 2.7
CDCA4-202ENST00000392590 A2MP01023 1474 aa31.91■■■□□ 2.7
CDCA4-202ENST00000392590 AGLP35573 1532 aa31.9■■■□□ 2.7
CDCA4-202ENST00000392590 ABCC5O15440 1437 aa31.88■■■□□ 2.69
CDCA4-202ENST00000392590 DHX29Q7Z478 1369 aaKnown RBP31.86■■■□□ 2.69
CDCA4-202ENST00000392590 DAPK1P53355 1430 aa31.84■■■□□ 2.69
CDCA4-202ENST00000392590 MADDQ8WXG6 1647 aa31.84■■■□□ 2.69
CDCA4-202ENST00000392590 MAST1Q9Y2H9 1570 aa31.82■■■□□ 2.69
CDCA4-202ENST00000392590 PTPRMP28827 1452 aa31.82■■■□□ 2.68
CDCA4-202ENST00000392590 ADGBQ8N7X0 1667 aa31.81■■■□□ 2.68
CDCA4-202ENST00000392590 PLXNC1O60486 1568 aa31.8■■■□□ 2.68
CDCA4-202ENST00000392590 ESF1Q9H501 851 aaKnown RBP31.79■■■□□ 2.68
CDCA4-202ENST00000392590 SHANK2Q9UPX8 1470 aa31.78■■■□□ 2.68
CDCA4-202ENST00000392590 DNMT1P26358 1616 aaKnown RBP31.78■■■□□ 2.68
CDCA4-202ENST00000392590 CHIC2Q9UKJ5 165 aa31.78■■■□□ 2.68
CDCA4-202ENST00000392590 GGT6Q6P531 493 aa31.77■■■□□ 2.68
CDCA4-202ENST00000392590 KIF3BO15066 747 aa31.75■■■□□ 2.67
CDCA4-202ENST00000392590 PLPPR3Q6T4P5 718 aa31.75■■■□□ 2.67
CDCA4-202ENST00000392590 RRP7BPQ9NSQ0 103 aa31.75■■■□□ 2.67
CDCA4-202ENST00000392590 RIMS1Q86UR5 1692 aaKnown RBP31.73■■■□□ 2.67
CDCA4-202ENST00000392590 ANKRD30AQ9BXX3 1397 aa31.7■■■□□ 2.67
CDCA4-202ENST00000392590 KIF15Q9NS87 1388 aa31.7■■■□□ 2.67
CDCA4-202ENST00000392590 FER1L4A9Z1Z3 1794 aa31.7■■■□□ 2.66
CDCA4-202ENST00000392590 CROCC2H7BZ55 1655 aa31.69■■■□□ 2.66
CDCA4-202ENST00000392590 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.69■■■□□ 2.66
CDCA4-202ENST00000392590 PPP6R1Q9UPN7 881 aa31.69■■■□□ 2.66
CDCA4-202ENST00000392590 CEBPAP49715 358 aaPredicted RBP31.65■■■□□ 2.66
CDCA4-202ENST00000392590 ITGAEP38570 1179 aa31.65■■■□□ 2.66
CDCA4-202ENST00000392590 DUOX2Q9NRD8 1548 aa31.64■■■□□ 2.66
CDCA4-202ENST00000392590 NCOA1Q15788 1441 aa31.64■■■□□ 2.66
CDCA4-202ENST00000392590 CNTLNQ9NXG0 1405 aa31.64■■■□□ 2.66
CDCA4-202ENST00000392590 RRBP1Q9P2E9 1410 aaKnown RBP31.64■■■□□ 2.65
CDCA4-202ENST00000392590 PTPRKQ15262 1439 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms