RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 NUDCQ9Y266 331 aa20.42■□□□□ 0.86
SHANK1-204ENST00000391814 HAP1P54257 671 aaPredicted RBP20.41■□□□□ 0.86
SHANK1-204ENST00000391814 ZNF771Q7L3S4 317 aaPredicted RBP20.4■□□□□ 0.86
SHANK1-204ENST00000391814 APBB1O00213 710 aa20.39■□□□□ 0.85
SHANK1-204ENST00000391814 CALD1Q05682 793 aaKnown RBP20.38■□□□□ 0.85
SHANK1-204ENST00000391814 GOLGA6L1Q8N7Z2 621 aa20.38■□□□□ 0.85
SHANK1-204ENST00000391814 FANCIQ9NVI1 1328 aa20.37■□□□□ 0.85
SHANK1-204ENST00000391814 ANO8Q9HCE9 1232 aaPredicted RBP20.36■□□□□ 0.85
SHANK1-204ENST00000391814 A0A0U1RQG5 324 aaPredicted RBP20.34■□□□□ 0.85
SHANK1-204ENST00000391814 KCNH8Q96L42 1107 aa20.34■□□□□ 0.85
SHANK1-204ENST00000391814 CFAP44Q96MT7 982 aa20.34■□□□□ 0.85
SHANK1-204ENST00000391814 PKNOX2Q96KN3 472 aa20.34■□□□□ 0.85
SHANK1-204ENST00000391814 EEA1Q15075 1411 aa20.34■□□□□ 0.85
SHANK1-204ENST00000391814 RWDD1Q9H446 243 aaPredicted RBP20.33■□□□□ 0.85
SHANK1-204ENST00000391814 NPHP1O15259 732 aa20.33■□□□□ 0.85
SHANK1-204ENST00000391814 NOC3LQ8WTT2 800 aaKnown RBP20.33■□□□□ 0.85
SHANK1-204ENST00000391814 DDX11L8A8MPP1 907 aa20.33■□□□□ 0.84
SHANK1-204ENST00000391814 ITPRIPQ8IWB1 547 aa20.33■□□□□ 0.84
SHANK1-204ENST00000391814 PPP1R15AO75807 674 aaPredicted RBP20.31■□□□□ 0.84
SHANK1-204ENST00000391814 PDE4CQ08493 712 aa20.31■□□□□ 0.84
SHANK1-204ENST00000391814 FOXD4L5Q5VV16 416 aaPredicted RBP20.31■□□□□ 0.84
SHANK1-204ENST00000391814 FOXD4L4Q8WXT5 416 aaPredicted RBP20.31■□□□□ 0.84
SHANK1-204ENST00000391814 CCNB3Q8WWL7 1395 aa20.31■□□□□ 0.84
SHANK1-204ENST00000391814 KTN1Q86UP2 1357 aaKnown RBP20.3■□□□□ 0.84
SHANK1-204ENST00000391814 FAM13BQ9NYF5 915 aa20.3■□□□□ 0.84
SHANK1-204ENST00000391814 PDE4AP27815 886 aa20.3■□□□□ 0.84
SHANK1-204ENST00000391814 TMF1P82094 1093 aa20.29■□□□□ 0.84
SHANK1-204ENST00000391814 PMFBP1Q8TBY8 1022 aa20.29■□□□□ 0.84
SHANK1-204ENST00000391814 GNL2Q13823 731 aaKnown RBP20.29■□□□□ 0.84
SHANK1-204ENST00000391814 CEP164Q9UPV0 1460 aa20.29■□□□□ 0.84
SHANK1-204ENST00000391814 SETQ01105 290 aaPredicted RBP20.28■□□□□ 0.84
SHANK1-204ENST00000391814 NOL8Q76FK4 1167 aaKnown RBP20.28■□□□□ 0.84
SHANK1-204ENST00000391814 TPM4P67936 248 aa20.27■□□□□ 0.84
SHANK1-204ENST00000391814 PRKCSHP14314 528 aaPredicted RBP20.26■□□□□ 0.83
SHANK1-204ENST00000391814 SETD5Q9C0A6 1442 aa20.25■□□□□ 0.83
SHANK1-204ENST00000391814 ISY1Q9ULR0 285 aaKnown RBP20.25■□□□□ 0.83
SHANK1-204ENST00000391814 HSP90B1P14625 803 aaKnown RBP20.24■□□□□ 0.83
SHANK1-204ENST00000391814 DCAF11Q8TEB1 546 aa20.24■□□□□ 0.83
SHANK1-204ENST00000391814 KIAA1211Q6ZU35 1233 aa20.24■□□□□ 0.83
SHANK1-204ENST00000391814 PHF14O94880 888 aa20.23■□□□□ 0.83
SHANK1-204ENST00000391814 PRM3Q9NNZ6 103 aa20.22■□□□□ 0.83
SHANK1-204ENST00000391814 LMOD2Q6P5Q4 547 aa20.22■□□□□ 0.83
SHANK1-204ENST00000391814 BAZ1BQ9UIG0 1483 aaKnown RBP20.21■□□□□ 0.83
SHANK1-204ENST00000391814 MORC1Q86VD1 984 aa20.2■□□□□ 0.82
SHANK1-204ENST00000391814 HTATSF1O43719 755 aaKnown RBP20.19■□□□□ 0.82
SHANK1-204ENST00000391814 GOLGA2Q08379 1002 aa20.19■□□□□ 0.82
SHANK1-204ENST00000391814 FAM161AQ3B820 660 aa20.19■□□□□ 0.82
SHANK1-204ENST00000391814 CSPP1Q1MSJ5 1256 aa20.18■□□□□ 0.82
SHANK1-204ENST00000391814 IPO8O15397 1037 aaKnown RBP20.18■□□□□ 0.82
SHANK1-204ENST00000391814 DDX49Q9Y6V7 483 aaKnown RBP20.17■□□□□ 0.82
SHANK1-204ENST00000391814 CFDP1Q9UEE9 299 aaPredicted RBP20.17■□□□□ 0.82
SHANK1-204ENST00000391814 ZNF592Q92610 1267 aa20.16■□□□□ 0.82
SHANK1-204ENST00000391814 RALBP1Q15311 655 aa20.15■□□□□ 0.82
SHANK1-204ENST00000391814 SKOR2Q2VWA4 1001 aaPredicted RBP20.15■□□□□ 0.82
SHANK1-204ENST00000391814 FOXD1Q16676 465 aa20.15■□□□□ 0.82
SHANK1-204ENST00000391814 IL27Q8NEV9 243 aa20.15■□□□□ 0.82
SHANK1-204ENST00000391814 CHMP7Q8WUX9 453 aaPredicted RBP20.15■□□□□ 0.82
SHANK1-204ENST00000391814 EXOC6Q8TAG9 804 aa20.14■□□□□ 0.81
SHANK1-204ENST00000391814 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.13■□□□□ 0.81
SHANK1-204ENST00000391814 CCDC146Q8IYE0 955 aa20.13■□□□□ 0.81
SHANK1-204ENST00000391814 POGKQ9P215 609 aa20.13■□□□□ 0.81
SHANK1-204ENST00000391814 PLIN1O60240 522 aa20.12■□□□□ 0.81
SHANK1-204ENST00000391814 FAM43AQ8N2R8 423 aa20.12■□□□□ 0.81
SHANK1-204ENST00000391814 TRIM6-TRIM34B2RNG4 842 aa20.12■□□□□ 0.81
SHANK1-204ENST00000391814 CENPQQ7L2Z9 268 aaPredicted RBP20.11■□□□□ 0.81
SHANK1-204ENST00000391814 PODXL2Q9NZ53 605 aa20.11■□□□□ 0.81
SHANK1-204ENST00000391814 FOXD4L6Q3SYB3 417 aaPredicted RBP20.11■□□□□ 0.81
SHANK1-204ENST00000391814 FOXD4L3Q6VB84 417 aaPredicted RBP20.11■□□□□ 0.81
SHANK1-204ENST00000391814 CCAR2Q8N163 923 aaKnown RBP20.11■□□□□ 0.81
SHANK1-204ENST00000391814 CREBRFQ8IUR6 639 aa20.1■□□□□ 0.81
SHANK1-204ENST00000391814 CLUAP1Q96AJ1 413 aa20.1■□□□□ 0.81
SHANK1-204ENST00000391814 RAB3GAP2Q9H2M9 1393 aa20.1■□□□□ 0.81
SHANK1-204ENST00000391814 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
SHANK1-204ENST00000391814 BRPF3Q9ULD4 1205 aa20.09■□□□□ 0.81
SHANK1-204ENST00000391814 ST18O60284 1047 aa20.09■□□□□ 0.81
SHANK1-204ENST00000391814 CRBNQ96SW2 442 aa20.09■□□□□ 0.81
SHANK1-204ENST00000391814 PATL2C9JE40 543 aaKnown RBP20.09■□□□□ 0.81
SHANK1-204ENST00000391814 SMC4Q9NTJ3 1288 aa20.08■□□□□ 0.81
SHANK1-204ENST00000391814 PLEKHD1A6NEE1 506 aa20.08■□□□□ 0.8
SHANK1-204ENST00000391814 RRP1P56182 461 aaKnown RBP20.07■□□□□ 0.8
SHANK1-204ENST00000391814 SOX12O15370 315 aa20.06■□□□□ 0.8
SHANK1-204ENST00000391814 R3HCC1Q9Y3T6 440 aaKnown RBP20.06■□□□□ 0.8
SHANK1-204ENST00000391814 ROCK2O75116 1388 aaKnown RBP20.05■□□□□ 0.8
SHANK1-204ENST00000391814 KIF16BQ96L93 1317 aa20.05■□□□□ 0.8
SHANK1-204ENST00000391814 NFKBIBQ15653 356 aa20.05■□□□□ 0.8
SHANK1-204ENST00000391814 CENPJQ9HC77 1338 aaPredicted RBP20.05■□□□□ 0.8
SHANK1-204ENST00000391814 TEX35Q5T0J7 233 aa20.05■□□□□ 0.8
SHANK1-204ENST00000391814 BCL11BQ9C0K0 894 aaPredicted RBP20.05■□□□□ 0.8
SHANK1-204ENST00000391814 CALRP27797 417 aaKnown RBP20.03■□□□□ 0.8
SHANK1-204ENST00000391814 FBXO3Q9UK99 471 aa20.02■□□□□ 0.8
SHANK1-204ENST00000391814 TPM3P06753 285 aa20.02■□□□□ 0.8
SHANK1-204ENST00000391814 ARHGAP35Q9NRY4 1499 aa20.02■□□□□ 0.8
SHANK1-204ENST00000391814 GPS2Q13227 327 aa20.01■□□□□ 0.79
SHANK1-204ENST00000391814 U2AF1L5P0DN76 240 aaPredicted RBP20.01■□□□□ 0.79
SHANK1-204ENST00000391814 U2AF1Q01081 240 aaKnown RBP eCLIP20.01■□□□□ 0.79
SHANK1-204ENST00000391814 RBM10P98175 930 aaKnown RBP20■□□□□ 0.79
SHANK1-204ENST00000391814 PDE3BQ13370 1112 aa19.99■□□□□ 0.79
SHANK1-204ENST00000391814 GOLGA6L19H0YKK7 550 aa19.99■□□□□ 0.79
SHANK1-204ENST00000391814 SRPK2P78362 688 aaKnown RBP19.99■□□□□ 0.79
SHANK1-204ENST00000391814 RTF1Q92541 710 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms