RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 NUDCQ9Y266 331 aa20.42■□□□□ 0.86
SHANK1-204ENST00000391814 HAP1P54257 671 aaPredicted RBP20.41■□□□□ 0.86
SHANK1-204ENST00000391814 ZNF771Q7L3S4 317 aaPredicted RBP20.4■□□□□ 0.86
SHANK1-204ENST00000391814 APBB1O00213 710 aa20.39■□□□□ 0.85
SHANK1-204ENST00000391814 CALD1Q05682 793 aaKnown RBP20.38■□□□□ 0.85
SHANK1-204ENST00000391814 GOLGA6L1Q8N7Z2 621 aa20.38■□□□□ 0.85
SHANK1-204ENST00000391814 FANCIQ9NVI1 1328 aa20.37■□□□□ 0.85
SHANK1-204ENST00000391814 ANO8Q9HCE9 1232 aaPredicted RBP20.36■□□□□ 0.85
SHANK1-204ENST00000391814 A0A0U1RQG5 324 aaPredicted RBP20.34■□□□□ 0.85
SHANK1-204ENST00000391814 KCNH8Q96L42 1107 aa20.34■□□□□ 0.85
SHANK1-204ENST00000391814 CFAP44Q96MT7 982 aa20.34■□□□□ 0.85
SHANK1-204ENST00000391814 PKNOX2Q96KN3 472 aa20.34■□□□□ 0.85
SHANK1-204ENST00000391814 EEA1Q15075 1411 aa20.34■□□□□ 0.85
SHANK1-204ENST00000391814 RWDD1Q9H446 243 aaPredicted RBP20.33■□□□□ 0.85
SHANK1-204ENST00000391814 NPHP1O15259 732 aa20.33■□□□□ 0.85
SHANK1-204ENST00000391814 NOC3LQ8WTT2 800 aaKnown RBP20.33■□□□□ 0.85
SHANK1-204ENST00000391814 DDX11L8A8MPP1 907 aa20.33■□□□□ 0.84
SHANK1-204ENST00000391814 ITPRIPQ8IWB1 547 aa20.33■□□□□ 0.84
SHANK1-204ENST00000391814 PPP1R15AO75807 674 aaPredicted RBP20.31■□□□□ 0.84
SHANK1-204ENST00000391814 PDE4CQ08493 712 aa20.31■□□□□ 0.84
SHANK1-204ENST00000391814 FOXD4L5Q5VV16 416 aaPredicted RBP20.31■□□□□ 0.84
SHANK1-204ENST00000391814 FOXD4L4Q8WXT5 416 aaPredicted RBP20.31■□□□□ 0.84
SHANK1-204ENST00000391814 CCNB3Q8WWL7 1395 aa20.31■□□□□ 0.84
SHANK1-204ENST00000391814 KTN1Q86UP2 1357 aaKnown RBP20.3■□□□□ 0.84
SHANK1-204ENST00000391814 FAM13BQ9NYF5 915 aa20.3■□□□□ 0.84
SHANK1-204ENST00000391814 PDE4AP27815 886 aa20.3■□□□□ 0.84
SHANK1-204ENST00000391814 TMF1P82094 1093 aa20.29■□□□□ 0.84
SHANK1-204ENST00000391814 PMFBP1Q8TBY8 1022 aa20.29■□□□□ 0.84
SHANK1-204ENST00000391814 GNL2Q13823 731 aaKnown RBP20.29■□□□□ 0.84
SHANK1-204ENST00000391814 CEP164Q9UPV0 1460 aa20.29■□□□□ 0.84
SHANK1-204ENST00000391814 SETQ01105 290 aaPredicted RBP20.28■□□□□ 0.84
SHANK1-204ENST00000391814 NOL8Q76FK4 1167 aaKnown RBP20.28■□□□□ 0.84
SHANK1-204ENST00000391814 TPM4P67936 248 aa20.27■□□□□ 0.84
SHANK1-204ENST00000391814 PRKCSHP14314 528 aaPredicted RBP20.26■□□□□ 0.83
SHANK1-204ENST00000391814 SETD5Q9C0A6 1442 aa20.25■□□□□ 0.83
SHANK1-204ENST00000391814 ISY1Q9ULR0 285 aaKnown RBP20.25■□□□□ 0.83
SHANK1-204ENST00000391814 HSP90B1P14625 803 aaKnown RBP20.24■□□□□ 0.83
SHANK1-204ENST00000391814 DCAF11Q8TEB1 546 aa20.24■□□□□ 0.83
SHANK1-204ENST00000391814 KIAA1211Q6ZU35 1233 aa20.24■□□□□ 0.83
SHANK1-204ENST00000391814 PHF14O94880 888 aa20.23■□□□□ 0.83
SHANK1-204ENST00000391814 PRM3Q9NNZ6 103 aa20.22■□□□□ 0.83
SHANK1-204ENST00000391814 LMOD2Q6P5Q4 547 aa20.22■□□□□ 0.83
SHANK1-204ENST00000391814 BAZ1BQ9UIG0 1483 aaKnown RBP20.21■□□□□ 0.83
SHANK1-204ENST00000391814 MORC1Q86VD1 984 aa20.2■□□□□ 0.82
SHANK1-204ENST00000391814 HTATSF1O43719 755 aaKnown RBP20.19■□□□□ 0.82
SHANK1-204ENST00000391814 GOLGA2Q08379 1002 aa20.19■□□□□ 0.82
SHANK1-204ENST00000391814 FAM161AQ3B820 660 aa20.19■□□□□ 0.82
SHANK1-204ENST00000391814 CSPP1Q1MSJ5 1256 aa20.18■□□□□ 0.82
SHANK1-204ENST00000391814 IPO8O15397 1037 aaKnown RBP20.18■□□□□ 0.82
SHANK1-204ENST00000391814 DDX49Q9Y6V7 483 aaKnown RBP20.17■□□□□ 0.82
SHANK1-204ENST00000391814 CFDP1Q9UEE9 299 aaPredicted RBP20.17■□□□□ 0.82
SHANK1-204ENST00000391814 ZNF592Q92610 1267 aa20.16■□□□□ 0.82
SHANK1-204ENST00000391814 RALBP1Q15311 655 aa20.15■□□□□ 0.82
SHANK1-204ENST00000391814 SKOR2Q2VWA4 1001 aaPredicted RBP20.15■□□□□ 0.82
SHANK1-204ENST00000391814 FOXD1Q16676 465 aa20.15■□□□□ 0.82
SHANK1-204ENST00000391814 IL27Q8NEV9 243 aa20.15■□□□□ 0.82
SHANK1-204ENST00000391814 CHMP7Q8WUX9 453 aaPredicted RBP20.15■□□□□ 0.82
SHANK1-204ENST00000391814 EXOC6Q8TAG9 804 aa20.14■□□□□ 0.81
SHANK1-204ENST00000391814 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.13■□□□□ 0.81
SHANK1-204ENST00000391814 CCDC146Q8IYE0 955 aa20.13■□□□□ 0.81
SHANK1-204ENST00000391814 POGKQ9P215 609 aa20.13■□□□□ 0.81
SHANK1-204ENST00000391814 PLIN1O60240 522 aa20.12■□□□□ 0.81
SHANK1-204ENST00000391814 FAM43AQ8N2R8 423 aa20.12■□□□□ 0.81
SHANK1-204ENST00000391814 TRIM6-TRIM34B2RNG4 842 aa20.12■□□□□ 0.81
SHANK1-204ENST00000391814 CENPQQ7L2Z9 268 aaPredicted RBP20.11■□□□□ 0.81
SHANK1-204ENST00000391814 PODXL2Q9NZ53 605 aa20.11■□□□□ 0.81
SHANK1-204ENST00000391814 FOXD4L6Q3SYB3 417 aaPredicted RBP20.11■□□□□ 0.81
SHANK1-204ENST00000391814 FOXD4L3Q6VB84 417 aaPredicted RBP20.11■□□□□ 0.81
SHANK1-204ENST00000391814 CCAR2Q8N163 923 aaKnown RBP20.11■□□□□ 0.81
SHANK1-204ENST00000391814 CREBRFQ8IUR6 639 aa20.1■□□□□ 0.81
SHANK1-204ENST00000391814 CLUAP1Q96AJ1 413 aa20.1■□□□□ 0.81
SHANK1-204ENST00000391814 RAB3GAP2Q9H2M9 1393 aa20.1■□□□□ 0.81
SHANK1-204ENST00000391814 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
SHANK1-204ENST00000391814 BRPF3Q9ULD4 1205 aa20.09■□□□□ 0.81
SHANK1-204ENST00000391814 ST18O60284 1047 aa20.09■□□□□ 0.81
SHANK1-204ENST00000391814 CRBNQ96SW2 442 aa20.09■□□□□ 0.81
SHANK1-204ENST00000391814 PATL2C9JE40 543 aaKnown RBP20.09■□□□□ 0.81
SHANK1-204ENST00000391814 SMC4Q9NTJ3 1288 aa20.08■□□□□ 0.81
SHANK1-204ENST00000391814 PLEKHD1A6NEE1 506 aa20.08■□□□□ 0.8
SHANK1-204ENST00000391814 RRP1P56182 461 aaKnown RBP20.07■□□□□ 0.8
SHANK1-204ENST00000391814 SOX12O15370 315 aa20.06■□□□□ 0.8
SHANK1-204ENST00000391814 R3HCC1Q9Y3T6 440 aaKnown RBP20.06■□□□□ 0.8
SHANK1-204ENST00000391814 ROCK2O75116 1388 aaKnown RBP20.05■□□□□ 0.8
SHANK1-204ENST00000391814 KIF16BQ96L93 1317 aa20.05■□□□□ 0.8
SHANK1-204ENST00000391814 NFKBIBQ15653 356 aa20.05■□□□□ 0.8
SHANK1-204ENST00000391814 CENPJQ9HC77 1338 aaPredicted RBP20.05■□□□□ 0.8
SHANK1-204ENST00000391814 TEX35Q5T0J7 233 aa20.05■□□□□ 0.8
SHANK1-204ENST00000391814 BCL11BQ9C0K0 894 aaPredicted RBP20.05■□□□□ 0.8
SHANK1-204ENST00000391814 CALRP27797 417 aaKnown RBP20.03■□□□□ 0.8
SHANK1-204ENST00000391814 FBXO3Q9UK99 471 aa20.02■□□□□ 0.8
SHANK1-204ENST00000391814 TPM3P06753 285 aa20.02■□□□□ 0.8
SHANK1-204ENST00000391814 ARHGAP35Q9NRY4 1499 aa20.02■□□□□ 0.8
SHANK1-204ENST00000391814 GPS2Q13227 327 aa20.01■□□□□ 0.79
SHANK1-204ENST00000391814 U2AF1L5P0DN76 240 aaPredicted RBP20.01■□□□□ 0.79
SHANK1-204ENST00000391814 U2AF1Q01081 240 aaKnown RBP eCLIP20.01■□□□□ 0.79
SHANK1-204ENST00000391814 RBM10P98175 930 aaKnown RBP20■□□□□ 0.79
SHANK1-204ENST00000391814 PDE3BQ13370 1112 aa19.99■□□□□ 0.79
SHANK1-204ENST00000391814 GOLGA6L19H0YKK7 550 aa19.99■□□□□ 0.79
SHANK1-204ENST00000391814 SRPK2P78362 688 aaKnown RBP19.99■□□□□ 0.79
SHANK1-204ENST00000391814 RTF1Q92541 710 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms