RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 POTEJP0CG39 1038 aa7.73□□□□□ -1.17
RNU6-550P-201ENST00000391057 MAMSTRQ6ZN01 415 aa7.73□□□□□ -1.17
RNU6-550P-201ENST00000391057 CRISPLD2Q9H0B8 497 aa7.73□□□□□ -1.17
RNU6-550P-201ENST00000391057 SCUBE2Q9NQ36 999 aa7.73□□□□□ -1.17
RNU6-550P-201ENST00000391057 NCKAP5LQ9HCH0 1330 aa7.73□□□□□ -1.17
RNU6-550P-201ENST00000391057 WDR70Q9NW82 654 aa7.72□□□□□ -1.17
RNU6-550P-201ENST00000391057 KDM2AQ9Y2K7 1162 aa7.72□□□□□ -1.17
RNU6-550P-201ENST00000391057 LARP6Q9BRS8 491 aaKnown RBP7.71□□□□□ -1.18
RNU6-550P-201ENST00000391057 GPHNQ9NQX3 736 aaPredicted RBP7.71□□□□□ -1.18
RNU6-550P-201ENST00000391057 LHX8Q68G74 356 aa7.7□□□□□ -1.18
RNU6-550P-201ENST00000391057 TMEM92Q6UXU6 159 aa7.7□□□□□ -1.18
RNU6-550P-201ENST00000391057 DDX27Q96GQ7 796 aaKnown RBP7.7□□□□□ -1.18
RNU6-550P-201ENST00000391057 C2orf72A6NCS6 295 aa7.69□□□□□ -1.18
RNU6-550P-201ENST00000391057 KIF3CO14782 793 aa7.68□□□□□ -1.18
RNU6-550P-201ENST00000391057 MFSD10Q14728 455 aa7.68□□□□□ -1.18
RNU6-550P-201ENST00000391057 PPP1R15BQ5SWA1 713 aa7.67□□□□□ -1.18
RNU6-550P-201ENST00000391057 DSG2Q14126 1118 aa7.66□□□□□ -1.18
RNU6-550P-201ENST00000391057 SLAIN1Q8ND83 568 aa7.66□□□□□ -1.18
RNU6-550P-201ENST00000391057 FOXK1P85037 733 aa7.65□□□□□ -1.18
RNU6-550P-201ENST00000391057 PLPP6Q8IY26 295 aa7.64□□□□□ -1.19
RNU6-550P-201ENST00000391057 OTUD5Q96G74 571 aa7.63□□□□□ -1.19
RNU6-550P-201ENST00000391057 E2F4Q16254 413 aa7.62□□□□□ -1.19
RNU6-550P-201ENST00000391057 P3H3Q8IVL6 736 aa7.62□□□□□ -1.19
RNU6-550P-201ENST00000391057 CAMK2BQ13554 666 aa7.59□□□□□ -1.19
RNU6-550P-201ENST00000391057 KCNV2Q8TDN2 545 aa7.59□□□□□ -1.19
RNU6-550P-201ENST00000391057 SNPHO15079 494 aa7.56□□□□□ -1.2
RNU6-550P-201ENST00000391057 DOK7Q18PE1 504 aa7.56□□□□□ -1.2
RNU6-550P-201ENST00000391057 UPF1Q92900 1129 aaKnown RBP eCLIP7.55□□□□□ -1.2
RNU6-550P-201ENST00000391057 EMILIN3Q9NT22 766 aa7.55□□□□□ -1.2
RNU6-550P-201ENST00000391057 RIMBP2O15034 1052 aa7.54□□□□□ -1.2
RNU6-550P-201ENST00000391057 SLC34A2O95436 690 aa7.54□□□□□ -1.2
RNU6-550P-201ENST00000391057 ARHGEF1Q92888 912 aaKnown RBP7.54□□□□□ -1.2
RNU6-550P-201ENST00000391057 TBC1D12O60347 775 aa7.53□□□□□ -1.2
RNU6-550P-201ENST00000391057 HOXB3P14651 431 aaPredicted RBP7.53□□□□□ -1.2
RNU6-550P-201ENST00000391057 ZNF710Q8N1W2 664 aa7.53□□□□□ -1.2
RNU6-550P-201ENST00000391057 DPYSL4O14531 572 aa7.52□□□□□ -1.21
RNU6-550P-201ENST00000391057 MAP3K9P80192 1104 aa7.52□□□□□ -1.21
RNU6-550P-201ENST00000391057 OXER1Q8TDS5 423 aa7.52□□□□□ -1.21
RNU6-550P-201ENST00000391057 PTCD2Q8WV60 388 aaKnown RBP7.52□□□□□ -1.21
RNU6-550P-201ENST00000391057 ARIH1Q9Y4X5 557 aaPredicted RBP7.52□□□□□ -1.21
RNU6-550P-201ENST00000391057 NBR1Q14596 966 aa7.51□□□□□ -1.21
RNU6-550P-201ENST00000391057 ZNF316A6NFI3 1004 aaPredicted RBP7.5□□□□□ -1.21
RNU6-550P-201ENST00000391057 ZSWIM6Q9HCJ5 1215 aa7.5□□□□□ -1.21
RNU6-550P-201ENST00000391057 PCDHGA4Q9Y5G9 962 aa7.5□□□□□ -1.21
RNU6-550P-201ENST00000391057 BCANQ96GW7 911 aa7.49□□□□□ -1.21
RNU6-550P-201ENST00000391057 SPDYE16A6NNV3 312 aaPredicted RBP7.47□□□□□ -1.21
RNU6-550P-201ENST00000391057 PDIA6Q15084 440 aa7.47□□□□□ -1.21
RNU6-550P-201ENST00000391057 EVI5O60447 810 aa7.46□□□□□ -1.22
RNU6-550P-201ENST00000391057 ARSIQ5FYB1 569 aa7.46□□□□□ -1.22
RNU6-550P-201ENST00000391057 GPR153Q6NV75 609 aa7.45□□□□□ -1.22
RNU6-550P-201ENST00000391057 KHSRPQ92945 711 aaKnown RBP eCLIP7.45□□□□□ -1.22
RNU6-550P-201ENST00000391057 NUDT7P0C024 238 aa7.44□□□□□ -1.22
RNU6-550P-201ENST00000391057 HOXB1P14653 301 aaPredicted RBP7.43□□□□□ -1.22
RNU6-550P-201ENST00000391057 SEMA3EO15041 775 aa7.42□□□□□ -1.22
RNU6-550P-201ENST00000391057 FAM163AQ96GL9 167 aaPredicted RBP7.42□□□□□ -1.22
RNU6-550P-201ENST00000391057 ST18O60284 1047 aa7.41□□□□□ -1.22
RNU6-550P-201ENST00000391057 TESPA1A2RU30 521 aaPredicted RBP7.4□□□□□ -1.22
RNU6-550P-201ENST00000391057 ANO8Q9HCE9 1232 aaPredicted RBP7.4□□□□□ -1.22
RNU6-550P-201ENST00000391057 KDM4FA0A1W2PPD8 638 aa7.39□□□□□ -1.23
RNU6-550P-201ENST00000391057 TULP1O00294 542 aaPredicted RBP7.39□□□□□ -1.23
RNU6-550P-201ENST00000391057 PTGER2P43116 358 aa7.39□□□□□ -1.23
RNU6-550P-201ENST00000391057 SMYD5Q6GMV2 418 aa7.39□□□□□ -1.23
RNU6-550P-201ENST00000391057 DDX12PQ92771 950 aa7.39□□□□□ -1.23
RNU6-550P-201ENST00000391057 GRXCR2A6NFK2 248 aa7.38□□□□□ -1.23
RNU6-550P-201ENST00000391057 MLLT3P42568 568 aaPredicted RBP7.38□□□□□ -1.23
RNU6-550P-201ENST00000391057 EMP3P54852 163 aa7.38□□□□□ -1.23
RNU6-550P-201ENST00000391057 LHX6Q9UPM6 363 aa7.38□□□□□ -1.23
RNU6-550P-201ENST00000391057 JPH4Q96JJ6 628 aa7.37□□□□□ -1.23
RNU6-550P-201ENST00000391057 PSDA5PKW4 1024 aaPredicted RBP7.36□□□□□ -1.23
RNU6-550P-201ENST00000391057 PHF14O94880 888 aa7.36□□□□□ -1.23
RNU6-550P-201ENST00000391057 ZNF454Q8N9F8 522 aa7.36□□□□□ -1.23
RNU6-550P-201ENST00000391057 MARVELD3Q96A59 401 aa7.35□□□□□ -1.23
RNU6-550P-201ENST00000391057 EPAS1Q99814 870 aa7.35□□□□□ -1.23
RNU6-550P-201ENST00000391057 ERBB3P21860 1342 aa7.34□□□□□ -1.23
RNU6-550P-201ENST00000391057 FOSBP53539 338 aa7.34□□□□□ -1.23
RNU6-550P-201ENST00000391057 PPP4R3BQ5MIZ7 849 aa7.34□□□□□ -1.23
RNU6-550P-201ENST00000391057 LCE2DQ5TA82 110 aaPredicted RBP7.34□□□□□ -1.23
RNU6-550P-201ENST00000391057 TYW1BQ6NUM6 668 aa7.34□□□□□ -1.23
RNU6-550P-201ENST00000391057 PCDHGA10Q9Y5H3 936 aa7.33□□□□□ -1.24
RNU6-550P-201ENST00000391057 OSBPP22059 807 aa7.32□□□□□ -1.24
RNU6-550P-201ENST00000391057 VARS2Q5ST30 1063 aaKnown RBP7.32□□□□□ -1.24
RNU6-550P-201ENST00000391057 FBXW7Q969H0 707 aa7.32□□□□□ -1.24
RNU6-550P-201ENST00000391057 ZDHHC16Q969W1 377 aa7.32□□□□□ -1.24
RNU6-550P-201ENST00000391057 FAM205CA6NFA0 338 aa7.31□□□□□ -1.24
RNU6-550P-201ENST00000391057 EN1Q05925 392 aaPredicted RBP7.31□□□□□ -1.24
RNU6-550P-201ENST00000391057 LMOD2Q6P5Q4 547 aa7.31□□□□□ -1.24
RNU6-550P-201ENST00000391057 RBM33Q96EV2 1170 aaKnown RBP7.31□□□□□ -1.24
RNU6-550P-201ENST00000391057 MAP3K7O43318 606 aa7.3□□□□□ -1.24
RNU6-550P-201ENST00000391057 RBM26Q5T8P6 1007 aaKnown RBP7.3□□□□□ -1.24
RNU6-550P-201ENST00000391057 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.3□□□□□ -1.24
RNU6-550P-201ENST00000391057 HS3ST6Q96QI5 342 aa7.29□□□□□ -1.24
RNU6-550P-201ENST00000391057 PRIM1P49642 420 aaKnown RBP7.28□□□□□ -1.24
RNU6-550P-201ENST00000391057 ADAM33Q9BZ11 813 aa7.28□□□□□ -1.24
RNU6-550P-201ENST00000391057 NUTM2FA1L443 756 aa7.27□□□□□ -1.25
RNU6-550P-201ENST00000391057 GPIHBP1Q8IV16 184 aa7.27□□□□□ -1.25
RNU6-550P-201ENST00000391057 KCNH8Q96L42 1107 aa7.26□□□□□ -1.25
RNU6-550P-201ENST00000391057 BCL2L12Q9HB09 334 aa7.26□□□□□ -1.25
RNU6-550P-201ENST00000391057 PTPREP23469 700 aa7.25□□□□□ -1.25
RNU6-550P-201ENST00000391057 TSR1Q2NL82 804 aaKnown RBP7.25□□□□□ -1.25
RNU6-550P-201ENST00000391057 C6orf132Q5T0Z8 1188 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms