RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 NBR1Q14596 966 aa10.44□□□□□ -0.74
SNORA40.2-201ENST00000390847 CRISPLD2Q9H0B8 497 aa10.44□□□□□ -0.74
SNORA40.2-201ENST00000390847 POTEFA5A3E0 1075 aa10.43□□□□□ -0.74
SNORA40.2-201ENST00000390847 TMC2Q8TDI7 906 aa10.43□□□□□ -0.74
SNORA40.2-201ENST00000390847 DDX27Q96GQ7 796 aaKnown RBP10.43□□□□□ -0.74
SNORA40.2-201ENST00000390847 TMEM121BQ9BXQ6 578 aaPredicted RBP10.42□□□□□ -0.74
SNORA40.2-201ENST00000390847 GPHNQ9NQX3 736 aaPredicted RBP10.4□□□□□ -0.74
SNORA40.2-201ENST00000390847 MFSD10Q14728 455 aa10.39□□□□□ -0.75
SNORA40.2-201ENST00000390847 E2F4Q16254 413 aa10.39□□□□□ -0.75
SNORA40.2-201ENST00000390847 KCNV2Q8TDN2 545 aa10.39□□□□□ -0.75
SNORA40.2-201ENST00000390847 C3orf67Q6ZVT6 689 aa10.38□□□□□ -0.75
SNORA40.2-201ENST00000390847 PPP1R15BQ5SWA1 713 aa10.36□□□□□ -0.75
SNORA40.2-201ENST00000390847 C2orf72A6NCS6 295 aa10.34□□□□□ -0.75
SNORA40.2-201ENST00000390847 DSG2Q14126 1118 aa10.34□□□□□ -0.75
SNORA40.2-201ENST00000390847 FOXK1P85037 733 aa10.31□□□□□ -0.76
SNORA40.2-201ENST00000390847 ARHGEF1Q92888 912 aaKnown RBP10.31□□□□□ -0.76
SNORA40.2-201ENST00000390847 TMEM92Q6UXU6 159 aa10.3□□□□□ -0.76
SNORA40.2-201ENST00000390847 PLPP6Q8IY26 295 aa10.3□□□□□ -0.76
SNORA40.2-201ENST00000390847 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.3□□□□□ -0.76
SNORA40.2-201ENST00000390847 KIF3CO14782 793 aa10.29□□□□□ -0.76
SNORA40.2-201ENST00000390847 CAMK2BQ13554 666 aa10.28□□□□□ -0.76
SNORA40.2-201ENST00000390847 EMILIN3Q9NT22 766 aa10.22□□□□□ -0.77
SNORA40.2-201ENST00000390847 POTEB2H3BUK9 544 aa10.21□□□□□ -0.77
SNORA40.2-201ENST00000390847 DPYSL4O14531 572 aa10.21□□□□□ -0.77
SNORA40.2-201ENST00000390847 SCUBE2Q9NQ36 999 aa10.21□□□□□ -0.77
SNORA40.2-201ENST00000390847 POTEJP0CG39 1038 aa10.2□□□□□ -0.78
SNORA40.2-201ENST00000390847 UPF1Q92900 1129 aaKnown RBP eCLIP10.2□□□□□ -0.78
SNORA40.2-201ENST00000390847 ARIH1Q9Y4X5 557 aaPredicted RBP10.2□□□□□ -0.78
SNORA40.2-201ENST00000390847 SEMA3EO15041 775 aa10.19□□□□□ -0.78
SNORA40.2-201ENST00000390847 MAMSTRQ6ZN01 415 aa10.19□□□□□ -0.78
SNORA40.2-201ENST00000390847 TULP1O00294 542 aaPredicted RBP10.18□□□□□ -0.78
SNORA40.2-201ENST00000390847 MAP3K9P80192 1104 aa10.18□□□□□ -0.78
SNORA40.2-201ENST00000390847 SLAIN1Q8ND83 568 aa10.16□□□□□ -0.78
SNORA40.2-201ENST00000390847 TPRNQ4KMQ1 711 aa10.14□□□□□ -0.79
SNORA40.2-201ENST00000390847 TESPA1A2RU30 521 aaPredicted RBP10.13□□□□□ -0.79
SNORA40.2-201ENST00000390847 SPDYE16A6NNV3 312 aaPredicted RBP10.13□□□□□ -0.79
SNORA40.2-201ENST00000390847 OXER1Q8TDS5 423 aa10.13□□□□□ -0.79
SNORA40.2-201ENST00000390847 TBC1D12O60347 775 aa10.12□□□□□ -0.79
SNORA40.2-201ENST00000390847 PDIA6Q15084 440 aa10.12□□□□□ -0.79
SNORA40.2-201ENST00000390847 SMYD5Q6GMV2 418 aa10.11□□□□□ -0.79
SNORA40.2-201ENST00000390847 PRKCSHP14314 528 aaPredicted RBP10.1□□□□□ -0.79
SNORA40.2-201ENST00000390847 ZNF316A6NFI3 1004 aaPredicted RBP10.09□□□□□ -0.79
SNORA40.2-201ENST00000390847 SLC34A2O95436 690 aa10.09□□□□□ -0.79
SNORA40.2-201ENST00000390847 LMOD2Q6P5Q4 547 aa10.09□□□□□ -0.79
SNORA40.2-201ENST00000390847 PTCD2Q8WV60 388 aaKnown RBP10.09□□□□□ -0.79
SNORA40.2-201ENST00000390847 MLLT3P42568 568 aaPredicted RBP10.08□□□□□ -0.8
SNORA40.2-201ENST00000390847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.08□□□□□ -0.8
SNORA40.2-201ENST00000390847 EVI5O60447 810 aa10.07□□□□□ -0.8
SNORA40.2-201ENST00000390847 DOK7Q18PE1 504 aa10.07□□□□□ -0.8
SNORA40.2-201ENST00000390847 LHX8Q68G74 356 aa10.05□□□□□ -0.8
SNORA40.2-201ENST00000390847 PCDHGA4Q9Y5G9 962 aa10.05□□□□□ -0.8
SNORA40.2-201ENST00000390847 GRXCR2A6NFK2 248 aa10.04□□□□□ -0.8
SNORA40.2-201ENST00000390847 RIMBP2O15034 1052 aa10.04□□□□□ -0.8
SNORA40.2-201ENST00000390847 ZNF710Q8N1W2 664 aa10.03□□□□□ -0.8
SNORA40.2-201ENST00000390847 DDX12PQ92771 950 aa10.03□□□□□ -0.8
SNORA40.2-201ENST00000390847 HOXB3P14651 431 aaPredicted RBP10.02□□□□□ -0.81
SNORA40.2-201ENST00000390847 OTUD5Q96G74 571 aa10.02□□□□□ -0.81
SNORA40.2-201ENST00000390847 SNPHO15079 494 aa10□□□□□ -0.81
SNORA40.2-201ENST00000390847 RBM26Q5T8P6 1007 aaKnown RBP10□□□□□ -0.81
SNORA40.2-201ENST00000390847 ARSIQ5FYB1 569 aa9.99□□□□□ -0.81
SNORA40.2-201ENST00000390847 PTGER2P43116 358 aa9.97□□□□□ -0.81
SNORA40.2-201ENST00000390847 KHSRPQ92945 711 aaKnown RBP eCLIP9.97□□□□□ -0.81
SNORA40.2-201ENST00000390847 ZSWIM6Q9HCJ5 1215 aa9.97□□□□□ -0.81
SNORA40.2-201ENST00000390847 NUDT7P0C024 238 aa9.96□□□□□ -0.82
SNORA40.2-201ENST00000390847 ANO8Q9HCE9 1232 aaPredicted RBP9.96□□□□□ -0.82
SNORA40.2-201ENST00000390847 GPIHBP1Q8IV16 184 aa9.95□□□□□ -0.82
SNORA40.2-201ENST00000390847 ZC3H15Q8WU90 426 aaKnown RBP9.94□□□□□ -0.82
SNORA40.2-201ENST00000390847 NUTM2FA1L443 756 aa9.93□□□□□ -0.82
SNORA40.2-201ENST00000390847 OSBPP22059 807 aa9.93□□□□□ -0.82
SNORA40.2-201ENST00000390847 GPR153Q6NV75 609 aa9.93□□□□□ -0.82
SNORA40.2-201ENST00000390847 PHF14O94880 888 aa9.91□□□□□ -0.82
SNORA40.2-201ENST00000390847 KDM4FA0A1W2PPD8 638 aa9.9□□□□□ -0.82
SNORA40.2-201ENST00000390847 EPAS1Q99814 870 aa9.9□□□□□ -0.82
SNORA40.2-201ENST00000390847 ZNF454Q8N9F8 522 aa9.89□□□□□ -0.83
SNORA40.2-201ENST00000390847 RBM33Q96EV2 1170 aaKnown RBP9.89□□□□□ -0.83
SNORA40.2-201ENST00000390847 JPH4Q96JJ6 628 aa9.89□□□□□ -0.83
SNORA40.2-201ENST00000390847 PCDHGA10Q9Y5H3 936 aa9.89□□□□□ -0.83
SNORA40.2-201ENST00000390847 MAP3K7O43318 606 aa9.88□□□□□ -0.83
SNORA40.2-201ENST00000390847 TYW1BQ6NUM6 668 aa9.88□□□□□ -0.83
SNORA40.2-201ENST00000390847 PRIM1P49642 420 aaKnown RBP9.87□□□□□ -0.83
SNORA40.2-201ENST00000390847 HOXB1P14653 301 aaPredicted RBP9.86□□□□□ -0.83
SNORA40.2-201ENST00000390847 FOSBP53539 338 aa9.86□□□□□ -0.83
SNORA40.2-201ENST00000390847 EN1Q05925 392 aaPredicted RBP9.86□□□□□ -0.83
SNORA40.2-201ENST00000390847 FBXW7Q969H0 707 aa9.86□□□□□ -0.83
SNORA40.2-201ENST00000390847 LHX6Q9UPM6 363 aa9.86□□□□□ -0.83
SNORA40.2-201ENST00000390847 ZMYND10O75800 440 aa9.84□□□□□ -0.83
SNORA40.2-201ENST00000390847 ZDHHC16Q969W1 377 aa9.84□□□□□ -0.83
SNORA40.2-201ENST00000390847 PPP4R3BQ5MIZ7 849 aa9.83□□□□□ -0.84
SNORA40.2-201ENST00000390847 KRI1Q8N9T8 703 aaKnown RBP9.83□□□□□ -0.84
SNORA40.2-201ENST00000390847 PSDA5PKW4 1024 aaPredicted RBP9.82□□□□□ -0.84
SNORA40.2-201ENST00000390847 FCHSD2O94868 740 aa9.82□□□□□ -0.84
SNORA40.2-201ENST00000390847 TSR1Q2NL82 804 aaKnown RBP9.81□□□□□ -0.84
SNORA40.2-201ENST00000390847 BARGINQ6ZT62 677 aa9.81□□□□□ -0.84
SNORA40.2-201ENST00000390847 CDHR5Q9HBB8 845 aa9.81□□□□□ -0.84
SNORA40.2-201ENST00000390847 GPR37O15354 613 aa9.8□□□□□ -0.84
SNORA40.2-201ENST00000390847 SLC24A3Q9HC58 644 aa9.8□□□□□ -0.84
SNORA40.2-201ENST00000390847 ST18O60284 1047 aa9.79□□□□□ -0.84
SNORA40.2-201ENST00000390847 PTGDRQ13258 359 aa9.79□□□□□ -0.84
SNORA40.2-201ENST00000390847 FAM163AQ96GL9 167 aaPredicted RBP9.79□□□□□ -0.84
SNORA40.2-201ENST00000390847 ADAM33Q9BZ11 813 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms