RNA–Protein interactions for RNA: ENST00000383897.1

RNU1-39P-201, Transcript of RNA, U1 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU1-39P, Length 165 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-39P-201ENST00000383897 TMC2Q8TDI7 906 aa9.05□□□□□ -0.96
RNU1-39P-201ENST00000383897 FAM163AQ96GL9 167 aaPredicted RBP9.05□□□□□ -0.96
RNU1-39P-201ENST00000383897 KIF3CO14782 793 aa9.02□□□□□ -0.97
RNU1-39P-201ENST00000383897 CADPS2Q86UW7 1296 aa9.02□□□□□ -0.97
RNU1-39P-201ENST00000383897 SNPHO15079 494 aa9□□□□□ -0.97
RNU1-39P-201ENST00000383897 NCKAP5LQ9HCH0 1330 aa8.99□□□□□ -0.97
RNU1-39P-201ENST00000383897 HOXB3P14651 431 aaPredicted RBP8.98□□□□□ -0.97
RNU1-39P-201ENST00000383897 GPHNQ9NQX3 736 aaPredicted RBP8.98□□□□□ -0.97
RNU1-39P-201ENST00000383897 ST18O60284 1047 aa8.97□□□□□ -0.97
RNU1-39P-201ENST00000383897 DSG2Q14126 1118 aa8.97□□□□□ -0.97
RNU1-39P-201ENST00000383897 LCE2DQ5TA82 110 aaPredicted RBP8.97□□□□□ -0.97
RNU1-39P-201ENST00000383897 DOK7Q18PE1 504 aa8.96□□□□□ -0.98
RNU1-39P-201ENST00000383897 ZNF710Q8N1W2 664 aa8.96□□□□□ -0.98
RNU1-39P-201ENST00000383897 LARP6Q9BRS8 491 aaKnown RBP8.96□□□□□ -0.98
RNU1-39P-201ENST00000383897 CRISPLD2Q9H0B8 497 aa8.96□□□□□ -0.98
RNU1-39P-201ENST00000383897 PDE4AP27815 886 aa8.95□□□□□ -0.98
RNU1-39P-201ENST00000383897 PLCB2Q00722 1185 aa8.94□□□□□ -0.98
RNU1-39P-201ENST00000383897 PLPP6Q8IY26 295 aa8.94□□□□□ -0.98
RNU1-39P-201ENST00000383897 FOXK1P85037 733 aa8.93□□□□□ -0.98
RNU1-39P-201ENST00000383897 PPP1R15BQ5SWA1 713 aa8.93□□□□□ -0.98
RNU1-39P-201ENST00000383897 MARVELD3Q96A59 401 aa8.93□□□□□ -0.98
RNU1-39P-201ENST00000383897 TSHZ2Q9NRE2 1034 aa8.93□□□□□ -0.98
RNU1-39P-201ENST00000383897 RIMBP2O15034 1052 aa8.92□□□□□ -0.98
RNU1-39P-201ENST00000383897 DDX27Q96GQ7 796 aaKnown RBP8.91□□□□□ -0.98
RNU1-39P-201ENST00000383897 POTEMA6NI47 508 aa8.89□□□□□ -0.99
RNU1-39P-201ENST00000383897 ARSIQ5FYB1 569 aa8.89□□□□□ -0.99
RNU1-39P-201ENST00000383897 KHSRPQ92945 711 aaKnown RBP eCLIP8.89□□□□□ -0.99
RNU1-39P-201ENST00000383897 POTEGQ6S5H5 508 aa8.88□□□□□ -0.99
RNU1-39P-201ENST00000383897 UPF1Q92900 1129 aaKnown RBP eCLIP8.88□□□□□ -0.99
RNU1-39P-201ENST00000383897 HAP1P54257 671 aaPredicted RBP8.87□□□□□ -0.99
RNU1-39P-201ENST00000383897 EMP3P54852 163 aa8.87□□□□□ -0.99
RNU1-39P-201ENST00000383897 MFSD10Q14728 455 aa8.87□□□□□ -0.99
RNU1-39P-201ENST00000383897 GPR153Q6NV75 609 aa8.86□□□□□ -0.99
RNU1-39P-201ENST00000383897 HOXB1P14653 301 aaPredicted RBP8.85□□□□□ -0.99
RNU1-39P-201ENST00000383897 PCDHGA4Q9Y5G9 962 aa8.85□□□□□ -0.99
RNU1-39P-201ENST00000383897 SLC34A2O95436 690 aa8.84□□□□□ -0.99
RNU1-39P-201ENST00000383897 NUDT7P0C024 238 aa8.84□□□□□ -0.99
RNU1-39P-201ENST00000383897 ZSWIM6Q9HCJ5 1215 aa8.84□□□□□ -0.99
RNU1-39P-201ENST00000383897 FAM205CA6NFA0 338 aa8.82□□□□□ -1
RNU1-39P-201ENST00000383897 WDR70Q9NW82 654 aa8.82□□□□□ -1
RNU1-39P-201ENST00000383897 PTCD2Q8WV60 388 aaKnown RBP8.81□□□□□ -1
RNU1-39P-201ENST00000383897 EMILIN3Q9NT22 766 aa8.8□□□□□ -1
RNU1-39P-201ENST00000383897 ERBB3P21860 1342 aa8.8□□□□□ -1
RNU1-39P-201ENST00000383897 OXER1Q8TDS5 423 aa8.79□□□□□ -1
RNU1-39P-201ENST00000383897 HS3ST6Q96QI5 342 aa8.79□□□□□ -1
RNU1-39P-201ENST00000383897 TBC1D12O60347 775 aa8.78□□□□□ -1
RNU1-39P-201ENST00000383897 POTEB3A0JP26 581 aa8.77□□□□□ -1.01
RNU1-39P-201ENST00000383897 VARS2Q5ST30 1063 aaKnown RBP8.77□□□□□ -1.01
RNU1-39P-201ENST00000383897 POTEBQ6S5H4 581 aa8.77□□□□□ -1.01
RNU1-39P-201ENST00000383897 MAP3K9P80192 1104 aa8.76□□□□□ -1.01
RNU1-39P-201ENST00000383897 LHX6Q9UPM6 363 aa8.76□□□□□ -1.01
RNU1-39P-201ENST00000383897 DPYSL4O14531 572 aa8.75□□□□□ -1.01
RNU1-39P-201ENST00000383897 CAMK2BQ13554 666 aa8.75□□□□□ -1.01
RNU1-39P-201ENST00000383897 E2F4Q16254 413 aa8.75□□□□□ -1.01
RNU1-39P-201ENST00000383897 ZNF316A6NFI3 1004 aaPredicted RBP8.74□□□□□ -1.01
RNU1-39P-201ENST00000383897 EVI5O60447 810 aa8.72□□□□□ -1.01
RNU1-39P-201ENST00000383897 CDAN1Q8IWY9 1227 aa8.72□□□□□ -1.01
RNU1-39P-201ENST00000383897 KDM4FA0A1W2PPD8 638 aa8.71□□□□□ -1.02
RNU1-39P-201ENST00000383897 KDM2AQ9Y2K7 1162 aa8.69□□□□□ -1.02
RNU1-39P-201ENST00000383897 KCNV2Q8TDN2 545 aa8.68□□□□□ -1.02
RNU1-39P-201ENST00000383897 ZNF454Q8N9F8 522 aa8.67□□□□□ -1.02
RNU1-39P-201ENST00000383897 ZNF687Q8N1G0 1237 aa8.65□□□□□ -1.02
RNU1-39P-201ENST00000383897 PPP4R3BQ5MIZ7 849 aa8.64□□□□□ -1.03
RNU1-39P-201ENST00000383897 PSDA5PKW4 1024 aaPredicted RBP8.63□□□□□ -1.03
RNU1-39P-201ENST00000383897 PDIA6Q15084 440 aa8.63□□□□□ -1.03
RNU1-39P-201ENST00000383897 DDX12PQ92771 950 aa8.63□□□□□ -1.03
RNU1-39P-201ENST00000383897 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
RNU1-39P-201ENST00000383897 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
RNU1-39P-201ENST00000383897 ANO8Q9HCE9 1232 aaPredicted RBP8.63□□□□□ -1.03
RNU1-39P-201ENST00000383897 AXIN2Q9Y2T1 843 aa8.63□□□□□ -1.03
RNU1-39P-201ENST00000383897 VSIG10Q8N0Z9 540 aa8.62□□□□□ -1.03
RNU1-39P-201ENST00000383897 PCDH10Q9P2E7 1040 aa8.62□□□□□ -1.03
RNU1-39P-201ENST00000383897 FOSBP53539 338 aa8.61□□□□□ -1.03
RNU1-39P-201ENST00000383897 P3H3Q8IVL6 736 aa8.61□□□□□ -1.03
RNU1-39P-201ENST00000383897 JPH4Q96JJ6 628 aa8.61□□□□□ -1.03
RNU1-39P-201ENST00000383897 POTEEQ6S8J3 1075 aa8.6□□□□□ -1.03
RNU1-39P-201ENST00000383897 ARIH1Q9Y4X5 557 aaPredicted RBP8.6□□□□□ -1.03
RNU1-39P-201ENST00000383897 SPDYE16A6NNV3 312 aaPredicted RBP8.59□□□□□ -1.03
RNU1-39P-201ENST00000383897 ARHGEF1Q92888 912 aaKnown RBP8.59□□□□□ -1.03
RNU1-39P-201ENST00000383897 KCNK17Q96T54 332 aa8.59□□□□□ -1.03
RNU1-39P-201ENST00000383897 PCDHGA10Q9Y5H3 936 aa8.59□□□□□ -1.03
RNU1-39P-201ENST00000383897 GRXCR2A6NFK2 248 aa8.58□□□□□ -1.04
RNU1-39P-201ENST00000383897 PSEN2P49810 448 aa8.58□□□□□ -1.04
RNU1-39P-201ENST00000383897 NBR1Q14596 966 aa8.58□□□□□ -1.04
RNU1-39P-201ENST00000383897 ZDHHC16Q969W1 377 aa8.58□□□□□ -1.04
RNU1-39P-201ENST00000383897 ADAM33Q9BZ11 813 aa8.58□□□□□ -1.04
RNU1-39P-201ENST00000383897 PHF14O94880 888 aa8.57□□□□□ -1.04
RNU1-39P-201ENST00000383897 RBM33Q96EV2 1170 aaKnown RBP8.57□□□□□ -1.04
RNU1-39P-201ENST00000383897 TYW1BQ6NUM6 668 aa8.56□□□□□ -1.04
RNU1-39P-201ENST00000383897 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
RNU1-39P-201ENST00000383897 ARHGAP33O14559 1287 aa8.55□□□□□ -1.04
RNU1-39P-201ENST00000383897 PBX2P40425 430 aa8.55□□□□□ -1.04
RNU1-39P-201ENST00000383897 MLLT3P42568 568 aaPredicted RBP8.54□□□□□ -1.04
RNU1-39P-201ENST00000383897 PTGER2P43116 358 aa8.54□□□□□ -1.04
RNU1-39P-201ENST00000383897 LSM11P83369 360 aaKnown RBP eCLIP8.54□□□□□ -1.04
RNU1-39P-201ENST00000383897 DMRTA1Q5VZB9 504 aa8.54□□□□□ -1.04
RNU1-39P-201ENST00000383897 BCL2L12Q9HB09 334 aa8.54□□□□□ -1.04
RNU1-39P-201ENST00000383897 SEMA3EO15041 775 aa8.53□□□□□ -1.04
RNU1-39P-201ENST00000383897 PTPREP23469 700 aa8.53□□□□□ -1.04
RNU1-39P-201ENST00000383897 KCNH8Q96L42 1107 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms