RNA–Protein interactions for RNA: ENST00000383897.1

RNU1-39P-201, Transcript of RNA, U1 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU1-39P, Length 165 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-39P-201ENST00000383897 AEBP2Q6ZN18 517 aaPredicted RBP19.69■□□□□ 0.74
RNU1-39P-201ENST00000383897 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
RNU1-39P-201ENST00000383897 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
RNU1-39P-201ENST00000383897 SENP3Q9H4L4 574 aaPredicted RBP16.68■□□□□ 0.26
RNU1-39P-201ENST00000383897 FOXD1Q16676 465 aa15.54■□□□□ 0.08
RNU1-39P-201ENST00000383897 PLPPR3Q6T4P5 718 aa15.42■□□□□ 0.06
RNU1-39P-201ENST00000383897 ADRA2BP18089 450 aa14.86□□□□□ -0.03
RNU1-39P-201ENST00000383897 PPP6R1Q9UPN7 881 aa14.86□□□□□ -0.03
RNU1-39P-201ENST00000383897 PIAS4Q8N2W9 510 aaPredicted RBP14.65□□□□□ -0.06
RNU1-39P-201ENST00000383897 MSH5O43196 834 aa14.34□□□□□ -0.11
RNU1-39P-201ENST00000383897 PPP4R3CPQ6ZMV5 832 aa13.6□□□□□ -0.23
RNU1-39P-201ENST00000383897 MAPK8IP2Q13387 824 aaPredicted RBP13.53□□□□□ -0.24
RNU1-39P-201ENST00000383897 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.25
RNU1-39P-201ENST00000383897 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
RNU1-39P-201ENST00000383897 DMRT2Q9Y5R5 561 aa13.3□□□□□ -0.28
RNU1-39P-201ENST00000383897 CNKSR2Q8WXI2 1034 aa13.22□□□□□ -0.29
RNU1-39P-201ENST00000383897 KCNA4P22459 653 aa13.17□□□□□ -0.3
RNU1-39P-201ENST00000383897 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
RNU1-39P-201ENST00000383897 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
RNU1-39P-201ENST00000383897 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
RNU1-39P-201ENST00000383897 HOXD11P31277 338 aaPredicted RBP12.94□□□□□ -0.34
RNU1-39P-201ENST00000383897 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
RNU1-39P-201ENST00000383897 SLC4A1APQ9BWU0 796 aaKnown RBP12.51□□□□□ -0.41
RNU1-39P-201ENST00000383897 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
RNU1-39P-201ENST00000383897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.42
RNU1-39P-201ENST00000383897 SLC4A2P04920 1241 aa12.32□□□□□ -0.44
RNU1-39P-201ENST00000383897 RNF39Q9H2S5 420 aa12.28□□□□□ -0.44
RNU1-39P-201ENST00000383897 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
RNU1-39P-201ENST00000383897 ZBTB22O15209 634 aa12.12□□□□□ -0.47
RNU1-39P-201ENST00000383897 FOXD4L1Q9NU39 408 aa12.12□□□□□ -0.47
RNU1-39P-201ENST00000383897 CACNB1Q02641 598 aaPredicted RBP12.1□□□□□ -0.47
RNU1-39P-201ENST00000383897 C1QBPQ07021 282 aaKnown RBP12.1□□□□□ -0.47
RNU1-39P-201ENST00000383897 EHMT2Q96KQ7 1210 aa12.09□□□□□ -0.47
RNU1-39P-201ENST00000383897 MYCNP04198 464 aaPredicted RBP12.02□□□□□ -0.49
RNU1-39P-201ENST00000383897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.93□□□□□ -0.5
RNU1-39P-201ENST00000383897 HNRNPUL2Q1KMD3 747 aaKnown RBP11.93□□□□□ -0.5
RNU1-39P-201ENST00000383897 CSRNP3Q8WYN3 585 aa11.92□□□□□ -0.5
RNU1-39P-201ENST00000383897 SPINK5Q9NQ38 1064 aaPredicted RBP11.92□□□□□ -0.5
RNU1-39P-201ENST00000383897 SAMD1Q6SPF0 538 aaPredicted RBP11.9□□□□□ -0.5
RNU1-39P-201ENST00000383897 CAPN15O75808 1086 aa11.88□□□□□ -0.51
RNU1-39P-201ENST00000383897 APLP2Q06481 763 aa11.83□□□□□ -0.52
RNU1-39P-201ENST00000383897 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
RNU1-39P-201ENST00000383897 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
RNU1-39P-201ENST00000383897 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
RNU1-39P-201ENST00000383897 ABCB7O75027 752 aa11.67□□□□□ -0.54
RNU1-39P-201ENST00000383897 DSG3P32926 999 aa11.66□□□□□ -0.54
RNU1-39P-201ENST00000383897 ATXN8OSP0DMR3 200 aa11.65□□□□□ -0.54
RNU1-39P-201ENST00000383897 POLA2Q14181 598 aa11.54□□□□□ -0.56
RNU1-39P-201ENST00000383897 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
RNU1-39P-201ENST00000383897 FBLN2P98095 1184 aa11.23□□□□□ -0.61
RNU1-39P-201ENST00000383897 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
RNU1-39P-201ENST00000383897 OSCARQ8IYS5 282 aa11.19□□□□□ -0.62
RNU1-39P-201ENST00000383897 RBM42Q9BTD8 480 aaKnown RBP11.08□□□□□ -0.64
RNU1-39P-201ENST00000383897 SPDYE2BA6NHP3 402 aa10.98□□□□□ -0.65
RNU1-39P-201ENST00000383897 SPDYE6P0CI01 402 aa10.98□□□□□ -0.65
RNU1-39P-201ENST00000383897 SPDYE2Q495Y8 402 aa10.98□□□□□ -0.65
RNU1-39P-201ENST00000383897 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
RNU1-39P-201ENST00000383897 AKT1S1Q96B36 256 aa10.92□□□□□ -0.66
RNU1-39P-201ENST00000383897 SPDYE4A6NLX3 237 aa10.91□□□□□ -0.66
RNU1-39P-201ENST00000383897 SSUH2Q9Y2M2 353 aa10.89□□□□□ -0.67
RNU1-39P-201ENST00000383897 REM2Q8IYK8 340 aaPredicted RBP10.85□□□□□ -0.67
RNU1-39P-201ENST00000383897 FKBP8Q14318 412 aa10.83□□□□□ -0.68
RNU1-39P-201ENST00000383897 PABPN1Q86U42 306 aaKnown RBP eCLIP10.83□□□□□ -0.68
RNU1-39P-201ENST00000383897 PITPNM1O00562 1244 aa10.75□□□□□ -0.69
RNU1-39P-201ENST00000383897 CLEC11AQ9Y240 323 aa10.74□□□□□ -0.69
RNU1-39P-201ENST00000383897 CHRDL2Q6WN34 429 aa10.71□□□□□ -0.69
RNU1-39P-201ENST00000383897 SPDYE1Q8NFV5 336 aaPredicted RBP10.71□□□□□ -0.69
RNU1-39P-201ENST00000383897 PROM2Q8N271 834 aa10.63□□□□□ -0.71
RNU1-39P-201ENST00000383897 PRR29P0C7W0 189 aa10.57□□□□□ -0.72
RNU1-39P-201ENST00000383897 PIP4P2Q8N4L2 257 aa10.56□□□□□ -0.72
RNU1-39P-201ENST00000383897 STAG3Q9UJ98 1225 aa10.55□□□□□ -0.72
RNU1-39P-201ENST00000383897 FXR2P51116 673 aaKnown RBP eCLIP10.53□□□□□ -0.72
RNU1-39P-201ENST00000383897 POTEHQ6S545 545 aa10.53□□□□□ -0.72
RNU1-39P-201ENST00000383897 CHADLQ6NUI6 762 aa10.49□□□□□ -0.73
RNU1-39P-201ENST00000383897 PRKAR2AP13861 404 aaKnown RBP10.48□□□□□ -0.73
RNU1-39P-201ENST00000383897 CREBZFQ9NS37 354 aa10.4□□□□□ -0.74
RNU1-39P-201ENST00000383897 FBXO3Q9UK99 471 aa10.4□□□□□ -0.74
RNU1-39P-201ENST00000383897 MIER1Q8N108 512 aa10.36□□□□□ -0.75
RNU1-39P-201ENST00000383897 PLCD3Q8N3E9 789 aa10.35□□□□□ -0.75
RNU1-39P-201ENST00000383897 FARP1Q9Y4F1 1045 aaPredicted RBP10.32□□□□□ -0.76
RNU1-39P-201ENST00000383897 VASPP50552 380 aaPredicted RBP10.31□□□□□ -0.76
RNU1-39P-201ENST00000383897 PLEKHG5O94827 1062 aa10.3□□□□□ -0.76
RNU1-39P-201ENST00000383897 HAX1O00165 279 aa10.27□□□□□ -0.77
RNU1-39P-201ENST00000383897 MNX1P50219 401 aaPredicted RBP10.26□□□□□ -0.77
RNU1-39P-201ENST00000383897 NPM1P06748 294 aaKnown RBP eCLIP10.21□□□□□ -0.77
RNU1-39P-201ENST00000383897 KLHL34Q8N239 644 aa10.2□□□□□ -0.78
RNU1-39P-201ENST00000383897 CD44P16070 742 aaKnown RBP10.18□□□□□ -0.78
RNU1-39P-201ENST00000383897 EVX2Q03828 476 aa10.18□□□□□ -0.78
RNU1-39P-201ENST00000383897 C19orf67A6NJJ6 358 aa10.17□□□□□ -0.78
RNU1-39P-201ENST00000383897 ZBTB47Q9UFB7 747 aaPredicted RBP10.17□□□□□ -0.78
RNU1-39P-201ENST00000383897 IFNLR1Q8IU57 520 aaPredicted RBP10.16□□□□□ -0.78
RNU1-39P-201ENST00000383897 TSPYL2Q9H2G4 693 aaPredicted RBP10.11□□□□□ -0.79
RNU1-39P-201ENST00000383897 ZRANB1Q9UGI0 708 aa10.11□□□□□ -0.79
RNU1-39P-201ENST00000383897 RASEFQ8IZ41 740 aa10.1□□□□□ -0.79
RNU1-39P-201ENST00000383897 PAK3O75914 559 aaPredicted RBP10.09□□□□□ -0.79
RNU1-39P-201ENST00000383897 NUBP1P53384 320 aa10.08□□□□□ -0.8
RNU1-39P-201ENST00000383897 SP7Q8TDD2 431 aaPredicted RBP10.05□□□□□ -0.8
RNU1-39P-201ENST00000383897 SPOCK2Q92563 424 aa10.04□□□□□ -0.8
RNU1-39P-201ENST00000383897 FAM212AQ96EL1 285 aa10.02□□□□□ -0.81
RNU1-39P-201ENST00000383897 PHF12Q96QT6 1004 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms