RNA–Protein interactions for RNA: ENST00000382381.7

ABCA3-202, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 6,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-202ENST00000382381 ANP32EQ9BTT0 268 aa16.61■□□□□ 0.25
ABCA3-202ENST00000382381 OSCARQ8IYS5 282 aa16.61■□□□□ 0.25
ABCA3-202ENST00000382381 TNIKQ9UKE5 1360 aa16.61■□□□□ 0.25
ABCA3-202ENST00000382381 ZNF330Q9Y3S2 320 aaPredicted RBP16.6■□□□□ 0.25
ABCA3-202ENST00000382381 NUDCQ9Y266 331 aa16.6■□□□□ 0.25
ABCA3-202ENST00000382381 JPH4Q96JJ6 628 aa16.58■□□□□ 0.25
ABCA3-202ENST00000382381 FANCD2Q9BXW9 1451 aa16.57■□□□□ 0.24
ABCA3-202ENST00000382381 GOLGA6L4A6NEF3 574 aa16.57■□□□□ 0.24
ABCA3-202ENST00000382381 STK26Q9P289 416 aa16.57■□□□□ 0.24
ABCA3-202ENST00000382381 NOP58Q9Y2X3 529 aaKnown RBP16.56■□□□□ 0.24
ABCA3-202ENST00000382381 KANK1Q14678 1352 aa16.56■□□□□ 0.24
ABCA3-202ENST00000382381 TOP2AP11388 1531 aaKnown RBP16.54■□□□□ 0.24
ABCA3-202ENST00000382381 CDCA8Q53HL2 280 aa16.54■□□□□ 0.24
ABCA3-202ENST00000382381 DCAF11Q8TEB1 546 aa16.54■□□□□ 0.24
ABCA3-202ENST00000382381 SRPK2P78362 688 aaKnown RBP16.53■□□□□ 0.24
ABCA3-202ENST00000382381 PDE4CQ08493 712 aa16.53■□□□□ 0.24
ABCA3-202ENST00000382381 FHAD1B1AJZ9 1412 aa16.53■□□□□ 0.24
ABCA3-202ENST00000382381 DRC7Q8IY82 874 aa16.53■□□□□ 0.24
ABCA3-202ENST00000382381 HNRNPMP52272 730 aaKnown RBP eCLIP16.53■□□□□ 0.24
ABCA3-202ENST00000382381 NUTM2DQ5VT03 806 aaPredicted RBP16.53■□□□□ 0.24
ABCA3-202ENST00000382381 PPP4R2Q9NY27 417 aa16.52■□□□□ 0.24
ABCA3-202ENST00000382381 GZF1Q9H116 711 aaPredicted RBP16.52■□□□□ 0.24
ABCA3-202ENST00000382381 ANO8Q9HCE9 1232 aaPredicted RBP16.52■□□□□ 0.23
ABCA3-202ENST00000382381 FOXD1Q16676 465 aa16.52■□□□□ 0.23
ABCA3-202ENST00000382381 AEBP2Q6ZN18 517 aaPredicted RBP16.52■□□□□ 0.23
ABCA3-202ENST00000382381 SMARCA4P51532 1647 aa16.51■□□□□ 0.23
ABCA3-202ENST00000382381 EFCAB2Q5VUJ9 269 aa16.51■□□□□ 0.23
ABCA3-202ENST00000382381 PAK3O75914 559 aaPredicted RBP16.48■□□□□ 0.23
ABCA3-202ENST00000382381 KIF3BO15066 747 aa16.47■□□□□ 0.23
ABCA3-202ENST00000382381 HSCBQ8IWL3 235 aa16.47■□□□□ 0.23
ABCA3-202ENST00000382381 KANK4Q5T7N3 995 aaPredicted RBP16.47■□□□□ 0.23
ABCA3-202ENST00000382381 HDGFP51858 240 aaKnown RBP16.46■□□□□ 0.23
ABCA3-202ENST00000382381 GOLGA6L6A8MZA4 724 aa16.46■□□□□ 0.23
ABCA3-202ENST00000382381 FHOD3Q2V2M9 1422 aa16.45■□□□□ 0.22
ABCA3-202ENST00000382381 SLKQ9H2G2 1235 aaPredicted RBP16.45■□□□□ 0.22
ABCA3-202ENST00000382381 GNL2Q13823 731 aaKnown RBP16.44■□□□□ 0.22
ABCA3-202ENST00000382381 MORC1Q86VD1 984 aa16.43■□□□□ 0.22
ABCA3-202ENST00000382381 MSNP26038 577 aaKnown RBP16.41■□□□□ 0.22
ABCA3-202ENST00000382381 FAM69CQ0P6D2 419 aa16.41■□□□□ 0.22
ABCA3-202ENST00000382381 DEKP35659 375 aaKnown RBP16.41■□□□□ 0.22
ABCA3-202ENST00000382381 NOL8Q76FK4 1167 aaKnown RBP16.41■□□□□ 0.22
ABCA3-202ENST00000382381 PKD2Q13563 968 aa16.4■□□□□ 0.22
ABCA3-202ENST00000382381 FOXD4L1Q9NU39 408 aa16.4■□□□□ 0.22
ABCA3-202ENST00000382381 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.4■□□□□ 0.22
ABCA3-202ENST00000382381 NRDCO43847 1150 aa16.4■□□□□ 0.22
ABCA3-202ENST00000382381 RTF1Q92541 710 aaKnown RBP16.39■□□□□ 0.21
ABCA3-202ENST00000382381 RAD54L2Q9Y4B4 1467 aa16.39■□□□□ 0.21
ABCA3-202ENST00000382381 TMF1P82094 1093 aa16.38■□□□□ 0.21
ABCA3-202ENST00000382381 WASHC2CQ9Y4E1 1318 aa16.38■□□□□ 0.21
ABCA3-202ENST00000382381 CHAF1AQ13111 956 aaPredicted RBP16.38■□□□□ 0.21
ABCA3-202ENST00000382381 CSB-PGBD3P0DP91 1061 aa16.38■□□□□ 0.21
ABCA3-202ENST00000382381 CHMP3Q9Y3E7 222 aa16.37■□□□□ 0.21
ABCA3-202ENST00000382381 SPAG9O60271 1321 aaKnown RBP16.37■□□□□ 0.21
ABCA3-202ENST00000382381 ARHGAP35Q9NRY4 1499 aa16.37■□□□□ 0.21
ABCA3-202ENST00000382381 NUTM2FA1L443 756 aa16.37■□□□□ 0.21
ABCA3-202ENST00000382381 AQRO60306 1485 aaKnown RBP eCLIP16.36■□□□□ 0.211e-6■■■■□ 25.9
ABCA3-202ENST00000382381 RAPGEF2Q9Y4G8 1499 aa16.36■□□□□ 0.21
ABCA3-202ENST00000382381 PTPRGP23470 1445 aa16.36■□□□□ 0.21
ABCA3-202ENST00000382381 CCDC9Q9Y3X0 531 aaKnown RBP16.36■□□□□ 0.21
ABCA3-202ENST00000382381 CREBRFQ8IUR6 639 aa16.36■□□□□ 0.21
ABCA3-202ENST00000382381 PNNQ9H307 717 aaKnown RBP16.36■□□□□ 0.21
ABCA3-202ENST00000382381 ITPRIPQ8IWB1 547 aa16.35■□□□□ 0.21
ABCA3-202ENST00000382381 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
ABCA3-202ENST00000382381 PRM3Q9NNZ6 103 aa16.35■□□□□ 0.21
ABCA3-202ENST00000382381 MCCP23508 829 aa16.34■□□□□ 0.21
ABCA3-202ENST00000382381 U2AF1L5P0DN76 240 aaPredicted RBP16.34■□□□□ 0.21
ABCA3-202ENST00000382381 U2AF1Q01081 240 aaKnown RBP eCLIP16.34■□□□□ 0.21
ABCA3-202ENST00000382381 CLUAP1Q96AJ1 413 aa16.33■□□□□ 0.21
ABCA3-202ENST00000382381 FOXD4L5Q5VV16 416 aaPredicted RBP16.33■□□□□ 0.2
ABCA3-202ENST00000382381 FOXD4L4Q8WXT5 416 aaPredicted RBP16.33■□□□□ 0.2
ABCA3-202ENST00000382381 FMN1Q68DA7 1419 aa16.33■□□□□ 0.2
ABCA3-202ENST00000382381 NESP48681 1621 aa16.33■□□□□ 0.2
ABCA3-202ENST00000382381 KIAA1211Q6ZU35 1233 aa16.32■□□□□ 0.2
ABCA3-202ENST00000382381 HSP90B1P14625 803 aaKnown RBP16.32■□□□□ 0.2
ABCA3-202ENST00000382381 RBM19Q9Y4C8 960 aaKnown RBP16.32■□□□□ 0.2
ABCA3-202ENST00000382381 MS4A1P11836 297 aa16.32■□□□□ 0.2
ABCA3-202ENST00000382381 NUP155O75694 1391 aa16.31■□□□□ 0.2
ABCA3-202ENST00000382381 CHMP4BQ9H444 224 aaKnown RBP16.31■□□□□ 0.2
ABCA3-202ENST00000382381 EID1Q9Y6B2 187 aa16.31■□□□□ 0.2
ABCA3-202ENST00000382381 MFAP1P55081 439 aaKnown RBP16.3■□□□□ 0.2
ABCA3-202ENST00000382381 HSPA5P11021 654 aaKnown RBP16.3■□□□□ 0.2
ABCA3-202ENST00000382381 SLC4A10Q6U841 1118 aa16.29■□□□□ 0.2
ABCA3-202ENST00000382381 NOC3LQ8WTT2 800 aaKnown RBP16.29■□□□□ 0.2
ABCA3-202ENST00000382381 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
ABCA3-202ENST00000382381 CCDC146Q8IYE0 955 aa16.28■□□□□ 0.2
ABCA3-202ENST00000382381 LTV1Q96GA3 475 aaPredicted RBP16.28■□□□□ 0.2
ABCA3-202ENST00000382381 CC2D2AQ9P2K1 1620 aa16.28■□□□□ 0.2
ABCA3-202ENST00000382381 TRIM6-TRIM34B2RNG4 842 aa16.28■□□□□ 0.2
ABCA3-202ENST00000382381 GORABQ5T7V8 394 aa16.27■□□□□ 0.2
ABCA3-202ENST00000382381 GAPVD1Q14C86 1478 aa16.27■□□□□ 0.2
ABCA3-202ENST00000382381 RUSC2Q8N2Y8 1516 aa16.27■□□□□ 0.2
ABCA3-202ENST00000382381 WWC1Q8IX03 1113 aa16.27■□□□□ 0.2
ABCA3-202ENST00000382381 FOXD4L6Q3SYB3 417 aaPredicted RBP16.25■□□□□ 0.19
ABCA3-202ENST00000382381 FOXD4L3Q6VB84 417 aaPredicted RBP16.25■□□□□ 0.19
ABCA3-202ENST00000382381 ANKRD30AQ9BXX3 1397 aa16.24■□□□□ 0.19
ABCA3-202ENST00000382381 VPS8Q8N3P4 1428 aa16.24■□□□□ 0.19
ABCA3-202ENST00000382381 TOMM22Q9NS69 142 aa16.23■□□□□ 0.19
ABCA3-202ENST00000382381 TAF7LQ5H9L4 462 aa16.22■□□□□ 0.19
ABCA3-202ENST00000382381 L1TD1Q5T7N2 865 aaKnown RBP16.22■□□□□ 0.19
ABCA3-202ENST00000382381 FBXO3Q9UK99 471 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms