RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 PCDH10Q9P2E7 1040 aa7.7□□□□□ -1.18
SMC6-202ENST00000381272 POTEGQ6S5H5 508 aa7.68□□□□□ -1.18
SMC6-202ENST00000381272 TMC2Q8TDI7 906 aa7.68□□□□□ -1.18
SMC6-202ENST00000381272 C2orf72A6NCS6 295 aa7.67□□□□□ -1.18
SMC6-202ENST00000381272 SPRYD3Q8NCJ5 442 aa7.67□□□□□ -1.18
SMC6-202ENST00000381272 KIF3CO14782 793 aa7.66□□□□□ -1.18
SMC6-202ENST00000381272 ST18O60284 1047 aa7.66□□□□□ -1.18
SMC6-202ENST00000381272 DOK7Q18PE1 504 aa7.66□□□□□ -1.18
SMC6-202ENST00000381272 LCE2DQ5TA82 110 aaPredicted RBP7.65□□□□□ -1.18
SMC6-202ENST00000381272 HOXB3P14651 431 aaPredicted RBP7.64□□□□□ -1.19
SMC6-202ENST00000381272 ZNF710Q8N1W2 664 aa7.64□□□□□ -1.19
SMC6-202ENST00000381272 GPHNQ9NQX3 736 aaPredicted RBP7.64□□□□□ -1.19
SMC6-202ENST00000381272 RIMBP2O15034 1052 aa7.63□□□□□ -1.19
SMC6-202ENST00000381272 PAXIP1Q6ZW49 1069 aaPredicted RBP7.63□□□□□ -1.19
SMC6-202ENST00000381272 CFAP44Q96MT7 982 aa7.63□□□□□ -1.19
SMC6-202ENST00000381272 PDE4AP27815 886 aa7.6□□□□□ -1.19
SMC6-202ENST00000381272 FOXK1P85037 733 aa7.6□□□□□ -1.19
SMC6-202ENST00000381272 CRISPLD2Q9H0B8 497 aa7.6□□□□□ -1.19
SMC6-202ENST00000381272 ZSWIM6Q9HCJ5 1215 aa7.59□□□□□ -1.19
SMC6-202ENST00000381272 NCKAP5LQ9HCH0 1330 aa7.58□□□□□ -1.2
SMC6-202ENST00000381272 DSG2Q14126 1118 aa7.58□□□□□ -1.2
SMC6-202ENST00000381272 PLPP6Q8IY26 295 aa7.58□□□□□ -1.2
SMC6-202ENST00000381272 HOXB1P14653 301 aaPredicted RBP7.57□□□□□ -1.2
SMC6-202ENST00000381272 MARVELD3Q96A59 401 aa7.57□□□□□ -1.2
SMC6-202ENST00000381272 SLC34A2O95436 690 aa7.56□□□□□ -1.2
SMC6-202ENST00000381272 EMP3P54852 163 aa7.56□□□□□ -1.2
SMC6-202ENST00000381272 CADPS2Q86UW7 1296 aa7.56□□□□□ -1.2
SMC6-202ENST00000381272 LARP6Q9BRS8 491 aaKnown RBP7.56□□□□□ -1.2
SMC6-202ENST00000381272 PPP1R15BQ5SWA1 713 aa7.55□□□□□ -1.2
SMC6-202ENST00000381272 GPR153Q6NV75 609 aa7.55□□□□□ -1.2
SMC6-202ENST00000381272 DDX27Q96GQ7 796 aaKnown RBP7.55□□□□□ -1.2
SMC6-202ENST00000381272 ARSIQ5FYB1 569 aa7.54□□□□□ -1.2
SMC6-202ENST00000381272 MFSD10Q14728 455 aa7.52□□□□□ -1.2
SMC6-202ENST00000381272 NISCHQ9Y2I1 1504 aa7.52□□□□□ -1.21
SMC6-202ENST00000381272 PCDHGA4Q9Y5G9 962 aa7.52□□□□□ -1.21
SMC6-202ENST00000381272 PTCD2Q8WV60 388 aaKnown RBP7.51□□□□□ -1.21
SMC6-202ENST00000381272 FAM205CA6NFA0 338 aa7.5□□□□□ -1.21
SMC6-202ENST00000381272 TBC1D12O60347 775 aa7.5□□□□□ -1.21
SMC6-202ENST00000381272 KHSRPQ92945 711 aaKnown RBP eCLIP7.5□□□□□ -1.212e-6■□□□□ 10.6
SMC6-202ENST00000381272 ERBB3P21860 1342 aa7.5□□□□□ -1.21
SMC6-202ENST00000381272 NUDT7P0C024 238 aa7.48□□□□□ -1.21
SMC6-202ENST00000381272 PLCB2Q00722 1185 aa7.48□□□□□ -1.21
SMC6-202ENST00000381272 HS3ST6Q96QI5 342 aa7.48□□□□□ -1.21
SMC6-202ENST00000381272 CDAN1Q8IWY9 1227 aa7.47□□□□□ -1.21
SMC6-202ENST00000381272 OXER1Q8TDS5 423 aa7.47□□□□□ -1.21
SMC6-202ENST00000381272 UPF1Q92900 1129 aaKnown RBP eCLIP7.47□□□□□ -1.21
SMC6-202ENST00000381272 TSHZ2Q9NRE2 1034 aa7.46□□□□□ -1.21
SMC6-202ENST00000381272 VARS2Q5ST30 1063 aaKnown RBP7.45□□□□□ -1.22
SMC6-202ENST00000381272 WDR70Q9NW82 654 aa7.45□□□□□ -1.22
SMC6-202ENST00000381272 ZNF316A6NFI3 1004 aaPredicted RBP7.45□□□□□ -1.22
SMC6-202ENST00000381272 POTEB3A0JP26 581 aa7.44□□□□□ -1.22
SMC6-202ENST00000381272 POTEBQ6S5H4 581 aa7.44□□□□□ -1.22
SMC6-202ENST00000381272 LHX6Q9UPM6 363 aa7.43□□□□□ -1.22
SMC6-202ENST00000381272 KDM4FA0A1W2PPD8 638 aa7.43□□□□□ -1.22
SMC6-202ENST00000381272 MAP3K9P80192 1104 aa7.43□□□□□ -1.22
SMC6-202ENST00000381272 CAMK2BQ13554 666 aa7.43□□□□□ -1.22
SMC6-202ENST00000381272 EMILIN3Q9NT22 766 aa7.43□□□□□ -1.22
SMC6-202ENST00000381272 PSDA5PKW4 1024 aaPredicted RBP7.41□□□□□ -1.22
SMC6-202ENST00000381272 ZNF687Q8N1G0 1237 aa7.4□□□□□ -1.23
SMC6-202ENST00000381272 EVI5O60447 810 aa7.39□□□□□ -1.23
SMC6-202ENST00000381272 E2F4Q16254 413 aa7.39□□□□□ -1.23
SMC6-202ENST00000381272 ANO8Q9HCE9 1232 aaPredicted RBP7.38□□□□□ -1.23
SMC6-202ENST00000381272 DPYSL4O14531 572 aa7.36□□□□□ -1.23
SMC6-202ENST00000381272 HAP1P54257 671 aaPredicted RBP7.36□□□□□ -1.23
SMC6-202ENST00000381272 PPP4R3BQ5MIZ7 849 aa7.36□□□□□ -1.23
SMC6-202ENST00000381272 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
SMC6-202ENST00000381272 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
SMC6-202ENST00000381272 PBX2P40425 430 aa7.34□□□□□ -1.24
SMC6-202ENST00000381272 ZNF454Q8N9F8 522 aa7.34□□□□□ -1.24
SMC6-202ENST00000381272 ARIH1Q9Y4X5 557 aaPredicted RBP7.33□□□□□ -1.24
SMC6-202ENST00000381272 FOSBP53539 338 aa7.32□□□□□ -1.24
SMC6-202ENST00000381272 JPH4Q96JJ6 628 aa7.32□□□□□ -1.24
SMC6-202ENST00000381272 SPDYE16A6NNV3 312 aaPredicted RBP7.31□□□□□ -1.24
SMC6-202ENST00000381272 PDIA6Q15084 440 aa7.31□□□□□ -1.24
SMC6-202ENST00000381272 ARHGAP33O14559 1287 aa7.3□□□□□ -1.24
SMC6-202ENST00000381272 KCNH8Q96L42 1107 aa7.29□□□□□ -1.24
SMC6-202ENST00000381272 AXIN2Q9Y2T1 843 aa7.29□□□□□ -1.24
SMC6-202ENST00000381272 PTGER2P43116 358 aa7.29□□□□□ -1.24
SMC6-202ENST00000381272 LSM11P83369 360 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMC6-202ENST00000381272 POTEEQ6S8J3 1075 aa7.29□□□□□ -1.24
SMC6-202ENST00000381272 P3H3Q8IVL6 736 aa7.29□□□□□ -1.24
SMC6-202ENST00000381272 ZDHHC16Q969W1 377 aa7.29□□□□□ -1.24
SMC6-202ENST00000381272 PHF14O94880 888 aa7.28□□□□□ -1.24
SMC6-202ENST00000381272 KCNV2Q8TDN2 545 aa7.28□□□□□ -1.24
SMC6-202ENST00000381272 ARHGEF1Q92888 912 aaKnown RBP7.28□□□□□ -1.24
SMC6-202ENST00000381272 BCL2L12Q9HB09 334 aa7.28□□□□□ -1.24
SMC6-202ENST00000381272 PCDHGA10Q9Y5H3 936 aa7.28□□□□□ -1.24
SMC6-202ENST00000381272 ANKRD13DQ6ZTN6 518 aa7.27□□□□□ -1.25
SMC6-202ENST00000381272 SPNS2Q8IVW8 549 aa7.27□□□□□ -1.25
SMC6-202ENST00000381272 DDX12PQ92771 950 aa7.27□□□□□ -1.25
SMC6-202ENST00000381272 FBXW7Q969H0 707 aa7.27□□□□□ -1.25
SMC6-202ENST00000381272 KCNK17Q96T54 332 aa7.27□□□□□ -1.25
SMC6-202ENST00000381272 PSEN2P49810 448 aa7.26□□□□□ -1.25
SMC6-202ENST00000381272 TYW1BQ6NUM6 668 aa7.26□□□□□ -1.25
SMC6-202ENST00000381272 EPAS1Q99814 870 aa7.26□□□□□ -1.25
SMC6-202ENST00000381272 PTPREP23469 700 aa7.25□□□□□ -1.25
SMC6-202ENST00000381272 VSIG10Q8N0Z9 540 aa7.25□□□□□ -1.25
SMC6-202ENST00000381272 ADAM33Q9BZ11 813 aa7.25□□□□□ -1.25
SMC6-202ENST00000381272 KDM2AQ9Y2K7 1162 aa7.24□□□□□ -1.25
SMC6-202ENST00000381272 DMRTA1Q5VZB9 504 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms