RNA–Protein interactions for RNA: ENST00000380171.7

ATRAID-201, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-201ENST00000380171 COL17A1Q9UMD9 1497 aaPredicted RBP42.02■■■■■ 4.32
ATRAID-201ENST00000380171 ITSN2Q9NZM3 1697 aa42.02■■■■■ 4.32
ATRAID-201ENST00000380171 NCOA2Q15596 1464 aa42.01■■■■■ 4.32
ATRAID-201ENST00000380171 CCNB3Q8WWL7 1395 aa42.01■■■■■ 4.31
ATRAID-201ENST00000380171 AKNAQ7Z591 1439 aa42■■■■■ 4.31
ATRAID-201ENST00000380171 KANK4Q5T7N3 995 aaPredicted RBP41.99■■■■■ 4.31
ATRAID-201ENST00000380171 GPATCH8Q9UKJ3 1502 aaKnown RBP41.98■■■■■ 4.31
ATRAID-201ENST00000380171 EFCAB2Q5VUJ9 269 aa41.95■■■■■ 4.31
ATRAID-201ENST00000380171 ADGRL1O94910 1474 aa41.92■■■■■ 4.3
ATRAID-201ENST00000380171 FRMPD1Q5SYB0 1578 aa41.86■■■■■ 4.29
ATRAID-201ENST00000380171 DENND4BO75064 1496 aaPredicted RBP41.85■■■■■ 4.29
ATRAID-201ENST00000380171 RICTORQ6R327 1708 aa41.85■■■■■ 4.29
ATRAID-201ENST00000380171 ABCC1P33527 1531 aa41.84■■■■■ 4.29
ATRAID-201ENST00000380171 SAMD9LQ8IVG5 1584 aa41.83■■■■■ 4.29
ATRAID-201ENST00000380171 SCAPERQ9BY12 1400 aa41.81■■■■■ 4.28
ATRAID-201ENST00000380171 CFDP1Q9UEE9 299 aaPredicted RBP41.81■■■■■ 4.28
ATRAID-201ENST00000380171 POGZQ7Z3K3 1410 aa41.77■■■■■ 4.28
ATRAID-201ENST00000380171 RAPGEF3O95398 923 aa41.76■■■■■ 4.28
ATRAID-201ENST00000380171 ZNF777Q9ULD5 760 aaPredicted RBP41.76■■■■■ 4.28
ATRAID-201ENST00000380171 SYCP2Q9BX26 1530 aa41.72■■■■■ 4.27
ATRAID-201ENST00000380171 MYOM3Q5VTT5 1437 aa41.7■■■■■ 4.27
ATRAID-201ENST00000380171 PLEKHH2Q8IVE3 1493 aa41.7■■■■■ 4.27
ATRAID-201ENST00000380171 ZMYM4Q5VZL5 1548 aa41.69■■■■■ 4.26
ATRAID-201ENST00000380171 ARHGEF12Q9NZN5 1544 aa41.68■■■■■ 4.26
ATRAID-201ENST00000380171 ZNF518AQ6AHZ1 1483 aa41.67■■■■■ 4.26
ATRAID-201ENST00000380171 CAMSAP2Q08AD1 1489 aa41.65■■■■■ 4.26
ATRAID-201ENST00000380171 KDM5CP41229 1560 aa41.62■■■■■ 4.25
ATRAID-201ENST00000380171 KIAA1107Q9UPP5 1409 aa41.61■■■■■ 4.25
ATRAID-201ENST00000380171 ZNF644Q9H582 1327 aaPredicted RBP41.59■■■■■ 4.25
ATRAID-201ENST00000380171 MIA2Q96PC5 1412 aa41.59■■■■■ 4.25
ATRAID-201ENST00000380171 TRAPPC8Q9Y2L5 1435 aa41.59■■■■■ 4.25
ATRAID-201ENST00000380171 ARHGEF40Q8TER5 1519 aa41.59■■■■■ 4.25
ATRAID-201ENST00000380171 HECW2Q9P2P5 1572 aa41.56■■■■■ 4.24
ATRAID-201ENST00000380171 ZFYVE16Q7Z3T8 1539 aa41.55■■■■■ 4.24
ATRAID-201ENST00000380171 MAGI2Q86UL8 1455 aa41.53■■■■■ 4.24
ATRAID-201ENST00000380171 HNRNPMP52272 730 aaKnown RBP eCLIP41.52■■■■■ 4.24
ATRAID-201ENST00000380171 PPARGC1BQ86YN6 1023 aaKnown RBP41.52■■■■■ 4.24
ATRAID-201ENST00000380171 AFAP1Q8N556 730 aa41.52■■■■■ 4.24
ATRAID-201ENST00000380171 PTPN23Q9H3S7 1636 aa41.51■■■■■ 4.24
ATRAID-201ENST00000380171 FGD6Q6ZV73 1430 aa41.5■■■■■ 4.23
ATRAID-201ENST00000380171 MBD5Q9P267 1494 aa41.47■■■■■ 4.23
ATRAID-201ENST00000380171 YEATS2Q9ULM3 1422 aa41.44■■■■■ 4.23
ATRAID-201ENST00000380171 ARHGEF5Q12774 1597 aa41.44■■■■■ 4.22
ATRAID-201ENST00000380171 CCDC141Q6ZP82 1450 aa41.43■■■■■ 4.22
ATRAID-201ENST00000380171 MLH3Q9UHC1 1453 aa41.42■■■■■ 4.22
ATRAID-201ENST00000380171 MYT1LQ9UL68 1186 aa41.41■■■■■ 4.22
ATRAID-201ENST00000380171 INO80Q9ULG1 1556 aaPredicted RBP41.41■■■■■ 4.22
ATRAID-201ENST00000380171 KIDINS220Q9ULH0 1771 aa41.4■■■■■ 4.22
ATRAID-201ENST00000380171 ABCA6Q8N139 1617 aa41.39■■■■■ 4.22
ATRAID-201ENST00000380171 TCOF1Q13428 1488 aaKnown RBP41.39■■■■■ 4.22
ATRAID-201ENST00000380171 ATP7AQ04656 1500 aa41.37■■■■■ 4.21
ATRAID-201ENST00000380171 DIP2CQ9Y2E4 1556 aa41.37■■■■■ 4.21
ATRAID-201ENST00000380171 SPAG9O60271 1321 aaKnown RBP41.35■■■■■ 4.21
ATRAID-201ENST00000380171 CROCC2H7BZ55 1655 aa41.29■■■■■ 4.2
ATRAID-201ENST00000380171 ATP10AO60312 1499 aa41.28■■■■■ 4.2
ATRAID-201ENST00000380171 RSPH4AQ5TD94 716 aa41.28■■■■■ 4.2
ATRAID-201ENST00000380171 C9orf84Q5VXU9 1444 aa41.27■■■■■ 4.2
ATRAID-201ENST00000380171 DNMT1P26358 1616 aaKnown RBP41.26■■■■■ 4.2
ATRAID-201ENST00000380171 SIGLEC1Q9BZZ2 1709 aa41.24■■■■■ 4.19
ATRAID-201ENST00000380171 MAST1Q9Y2H9 1570 aa41.22■■■■■ 4.19
ATRAID-201ENST00000380171 REREQ9P2R6 1566 aa41.21■■■■■ 4.19
ATRAID-201ENST00000380171 RTEL1-TNFRSF6BF6WH68 1400 aa41.2■■■■■ 4.19
ATRAID-201ENST00000380171 FAM50AQ14320 339 aaKnown RBP41.2■■■■■ 4.19
ATRAID-201ENST00000380171 ADGBQ8N7X0 1667 aa41.19■■■■■ 4.18
ATRAID-201ENST00000380171 DAPK1P53355 1430 aa41.18■■■■■ 4.18
ATRAID-201ENST00000380171 ARID4BQ4LE39 1312 aaPredicted RBP41.17■■■■■ 4.18
ATRAID-201ENST00000380171 SHANK2Q9UPX8 1470 aa41.16■■■■■ 4.18
ATRAID-201ENST00000380171 TSPY4P0CV99 314 aa41.16■■■■■ 4.18
ATRAID-201ENST00000380171 TSPY10P0CW01 314 aa41.16■■■■■ 4.18
ATRAID-201ENST00000380171 ABCC5O15440 1437 aa41.15■■■■■ 4.18
ATRAID-201ENST00000380171 BCORL1Q5H9F3 1711 aa41.12■■■■■ 4.17
ATRAID-201ENST00000380171 PLXNC1O60486 1568 aa41.09■■■■■ 4.17
ATRAID-201ENST00000380171 A2MP01023 1474 aa41.09■■■■■ 4.17
ATRAID-201ENST00000380171 RRBP1Q9P2E9 1410 aaKnown RBP41.07■■■■■ 4.16
ATRAID-201ENST00000380171 AGLP35573 1532 aa41.05■■■■■ 4.16
ATRAID-201ENST00000380171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP41.01■■■■■ 4.16
ATRAID-201ENST00000380171 ADAMTSL3P82987 1691 aa41.01■■■■■ 4.15
ATRAID-201ENST00000380171 KDM4FA0A1W2PPD8 638 aa40.97■■■■■ 4.15
ATRAID-201ENST00000380171 MADDQ8WXG6 1647 aa40.95■■■■■ 4.15
ATRAID-201ENST00000380171 MLECQ14165 292 aa40.93■■■■■ 4.14
ATRAID-201ENST00000380171 FER1L4A9Z1Z3 1794 aa40.92■■■■■ 4.14
ATRAID-201ENST00000380171 DHX29Q7Z478 1369 aaKnown RBP40.92■■■■■ 4.14
ATRAID-201ENST00000380171 CHIC2Q9UKJ5 165 aa40.91■■■■■ 4.14
ATRAID-201ENST00000380171 ADGRL2O95490 1459 aa40.9■■■■■ 4.14
ATRAID-201ENST00000380171 ANKRD30AQ9BXX3 1397 aa40.89■■■■■ 4.14
ATRAID-201ENST00000380171 KIF15Q9NS87 1388 aa40.89■■■■■ 4.14
ATRAID-201ENST00000380171 DUOX2Q9NRD8 1548 aa40.89■■■■■ 4.14
ATRAID-201ENST00000380171 RIMS1Q86UR5 1692 aaKnown RBP40.86■■■■■ 4.13
ATRAID-201ENST00000380171 PTPRKQ15262 1439 aa40.85■■■■■ 4.13
ATRAID-201ENST00000380171 ITGAEP38570 1179 aa40.84■■■■■ 4.13
ATRAID-201ENST00000380171 EIF2AK4Q9P2K8 1649 aaKnown RBP40.84■■■■■ 4.13
ATRAID-201ENST00000380171 NCOA1Q15788 1441 aa40.82■■■■■ 4.12
ATRAID-201ENST00000380171 RRP7BPQ9NSQ0 103 aa40.81■■■■■ 4.12
ATRAID-201ENST00000380171 ERBINQ96RT1 1412 aa40.76■■■■■ 4.12
ATRAID-201ENST00000380171 RNF17Q9BXT8 1623 aaKnown RBP40.74■■■■■ 4.11
ATRAID-201ENST00000380171 ROCK1Q13464 1354 aa40.74■■■■■ 4.11
ATRAID-201ENST00000380171 KIF3BO15066 747 aa40.73■■■■■ 4.11
ATRAID-201ENST00000380171 PTPRMP28827 1452 aa40.7■■■■■ 4.11
ATRAID-201ENST00000380171 GGT6Q6P531 493 aa40.69■■■■■ 4.1
ATRAID-201ENST00000380171 AEBP2Q6ZN18 517 aaPredicted RBP40.68■■■■■ 4.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms