RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 EHBP1L1Q8N3D4 1523 aa34.51■■■■□ 3.12
GFRA3-202ENST00000378362 SCAPERQ9BY12 1400 aa34.51■■■■□ 3.12
GFRA3-202ENST00000378362 CFAP74Q9C0B2 1584 aa34.5■■■■□ 3.11
GFRA3-202ENST00000378362 GPATCH8Q9UKJ3 1502 aaKnown RBP34.49■■■■□ 3.11
GFRA3-202ENST00000378362 DENND4BO75064 1496 aaPredicted RBP34.49■■■■□ 3.11
GFRA3-202ENST00000378362 PREX2Q70Z35 1606 aa34.48■■■■□ 3.11
GFRA3-202ENST00000378362 CCNB3Q8WWL7 1395 aa34.48■■■■□ 3.11
GFRA3-202ENST00000378362 FRMPD1Q5SYB0 1578 aa34.48■■■■□ 3.11
GFRA3-202ENST00000378362 LRRC9Q6ZRR7 1453 aa34.46■■■■□ 3.11
GFRA3-202ENST00000378362 APLP2Q06481 763 aa34.46■■■■□ 3.11
GFRA3-202ENST00000378362 CFDP1Q9UEE9 299 aaPredicted RBP34.44■■■■□ 3.1
GFRA3-202ENST00000378362 RICTORQ6R327 1708 aa34.42■■■■□ 3.1
GFRA3-202ENST00000378362 NCOA2Q15596 1464 aa34.42■■■■□ 3.1
GFRA3-202ENST00000378362 AFAP1Q8N556 730 aa34.41■■■■□ 3.1
GFRA3-202ENST00000378362 ZNF644Q9H582 1327 aaPredicted RBP34.39■■■■□ 3.1
GFRA3-202ENST00000378362 SUPT6HQ7KZ85 1726 aaKnown RBP34.38■■■■□ 3.09
GFRA3-202ENST00000378362 ARHGEF12Q9NZN5 1544 aa34.37■■■■□ 3.09
GFRA3-202ENST00000378362 MAP3K1Q13233 1512 aa34.36■■■■□ 3.09
GFRA3-202ENST00000378362 POGZQ7Z3K3 1410 aa34.36■■■■□ 3.09
GFRA3-202ENST00000378362 HNRNPMP52272 730 aaKnown RBP eCLIP34.34■■■■□ 3.09
GFRA3-202ENST00000378362 SAMD9LQ8IVG5 1584 aa34.33■■■■□ 3.09
GFRA3-202ENST00000378362 TRAPPC8Q9Y2L5 1435 aa34.32■■■■□ 3.08
GFRA3-202ENST00000378362 YEATS2Q9ULM3 1422 aa34.3■■■■□ 3.08
GFRA3-202ENST00000378362 ABCC1P33527 1531 aa34.3■■■■□ 3.08
GFRA3-202ENST00000378362 MYT1LQ9UL68 1186 aa34.3■■■■□ 3.08
GFRA3-202ENST00000378362 KDM4FA0A1W2PPD8 638 aa34.29■■■■□ 3.08
GFRA3-202ENST00000378362 PPARGC1BQ86YN6 1023 aaKnown RBP34.29■■■■□ 3.08
GFRA3-202ENST00000378362 SYCP2Q9BX26 1530 aa34.26■■■■□ 3.07
GFRA3-202ENST00000378362 ZNF518AQ6AHZ1 1483 aa34.24■■■■□ 3.07
GFRA3-202ENST00000378362 ITSN2Q9NZM3 1697 aa34.23■■■■□ 3.07
GFRA3-202ENST00000378362 ZMYM4Q5VZL5 1548 aa34.21■■■■□ 3.07
GFRA3-202ENST00000378362 ARID4BQ4LE39 1312 aaPredicted RBP34.2■■■■□ 3.07
GFRA3-202ENST00000378362 ZFYVE16Q7Z3T8 1539 aa34.19■■■■□ 3.06
GFRA3-202ENST00000378362 ARHGEF40Q8TER5 1519 aa34.16■■■■□ 3.06
GFRA3-202ENST00000378362 AEBP2Q6ZN18 517 aaPredicted RBP34.16■■■■□ 3.06
GFRA3-202ENST00000378362 KDM5CP41229 1560 aa34.15■■■■□ 3.06
GFRA3-202ENST00000378362 KIAA1107Q9UPP5 1409 aa34.12■■■■□ 3.05
GFRA3-202ENST00000378362 CAMSAP2Q08AD1 1489 aa34.11■■■■□ 3.05
GFRA3-202ENST00000378362 SIGLEC1Q9BZZ2 1709 aa34.11■■■■□ 3.05
GFRA3-202ENST00000378362 MAGI2Q86UL8 1455 aa34.11■■■■□ 3.05
GFRA3-202ENST00000378362 MYOM3Q5VTT5 1437 aa34.1■■■■□ 3.05
GFRA3-202ENST00000378362 PLEKHH2Q8IVE3 1493 aa34.09■■■■□ 3.05
GFRA3-202ENST00000378362 HECW2Q9P2P5 1572 aa34.09■■■■□ 3.05
GFRA3-202ENST00000378362 SPAG9O60271 1321 aaKnown RBP34.08■■■■□ 3.05
GFRA3-202ENST00000378362 MBD5Q9P267 1494 aa34.08■■■■□ 3.05
GFRA3-202ENST00000378362 MLECQ14165 292 aa34.07■■■■□ 3.04
GFRA3-202ENST00000378362 MLH3Q9UHC1 1453 aa34.05■■■■□ 3.04
GFRA3-202ENST00000378362 ATP10AO60312 1499 aa34.04■■■■□ 3.04
GFRA3-202ENST00000378362 KIDINS220Q9ULH0 1771 aa34.04■■■■□ 3.04
GFRA3-202ENST00000378362 ABCA6Q8N139 1617 aa34.02■■■■□ 3.04
GFRA3-202ENST00000378362 DIP2CQ9Y2E4 1556 aa34.01■■■■□ 3.03
GFRA3-202ENST00000378362 C9orf84Q5VXU9 1444 aa33.97■■■■□ 3.03
GFRA3-202ENST00000378362 MIA2Q96PC5 1412 aa33.97■■■■□ 3.03
GFRA3-202ENST00000378362 ATP7AQ04656 1500 aa33.94■■■■□ 3.02
GFRA3-202ENST00000378362 FGD6Q6ZV73 1430 aa33.94■■■■□ 3.02
GFRA3-202ENST00000378362 CCDC141Q6ZP82 1450 aa33.93■■■■□ 3.02
GFRA3-202ENST00000378362 BCORL1Q5H9F3 1711 aa33.92■■■■□ 3.02
GFRA3-202ENST00000378362 PTPN23Q9H3S7 1636 aa33.91■■■■□ 3.02
GFRA3-202ENST00000378362 INO80Q9ULG1 1556 aaPredicted RBP33.9■■■■□ 3.02
GFRA3-202ENST00000378362 PLPPR3Q6T4P5 718 aa33.89■■■■□ 3.02
GFRA3-202ENST00000378362 FAM50AQ14320 339 aaKnown RBP33.88■■■■□ 3.01
GFRA3-202ENST00000378362 TSPY4P0CV99 314 aa33.87■■■■□ 3.01
GFRA3-202ENST00000378362 TSPY10P0CW01 314 aa33.87■■■■□ 3.01
GFRA3-202ENST00000378362 ADAMTSL3P82987 1691 aa33.86■■■■□ 3.01
GFRA3-202ENST00000378362 RSPH4AQ5TD94 716 aa33.85■■■■□ 3.01
GFRA3-202ENST00000378362 MADDQ8WXG6 1647 aa33.85■■■■□ 3.01
GFRA3-202ENST00000378362 ARHGEF5Q12774 1597 aa33.84■■■■□ 3.01
GFRA3-202ENST00000378362 CHIC2Q9UKJ5 165 aa33.79■■■■□ 3
GFRA3-202ENST00000378362 A2MP01023 1474 aa33.78■■■■□ 3
GFRA3-202ENST00000378362 RTEL1-TNFRSF6BF6WH68 1400 aa33.78■■■■□ 3
GFRA3-202ENST00000378362 ABCC5O15440 1437 aa33.77■■■■□ 3
GFRA3-202ENST00000378362 TCOF1Q13428 1488 aaKnown RBP33.77■■■■□ 3
GFRA3-202ENST00000378362 RIMS1Q86UR5 1692 aaKnown RBP33.76■■■□□ 2.99
GFRA3-202ENST00000378362 REREQ9P2R6 1566 aa33.76■■■□□ 2.99
GFRA3-202ENST00000378362 PTPRMP28827 1452 aa33.73■■■□□ 2.99
GFRA3-202ENST00000378362 ADGBQ8N7X0 1667 aa33.72■■■□□ 2.99
GFRA3-202ENST00000378362 DAPK1P53355 1430 aa33.72■■■□□ 2.99
GFRA3-202ENST00000378362 GGT6Q6P531 493 aa33.72■■■□□ 2.99
GFRA3-202ENST00000378362 FER1L4A9Z1Z3 1794 aa33.7■■■□□ 2.99
GFRA3-202ENST00000378362 AGLP35573 1532 aa33.7■■■□□ 2.98
GFRA3-202ENST00000378362 CEBPAP49715 358 aaPredicted RBP33.69■■■□□ 2.98
GFRA3-202ENST00000378362 RRP7BPQ9NSQ0 103 aa33.69■■■□□ 2.98
GFRA3-202ENST00000378362 PLXNC1O60486 1568 aa33.68■■■□□ 2.98
GFRA3-202ENST00000378362 DHX29Q7Z478 1369 aaKnown RBP33.68■■■□□ 2.98
GFRA3-202ENST00000378362 ITGAEP38570 1179 aa33.67■■■□□ 2.98
GFRA3-202ENST00000378362 DNMT1P26358 1616 aaKnown RBP33.67■■■□□ 2.98
GFRA3-202ENST00000378362 KIF3BO15066 747 aa33.66■■■□□ 2.98
GFRA3-202ENST00000378362 MAST1Q9Y2H9 1570 aa33.64■■■□□ 2.98
GFRA3-202ENST00000378362 CROCC2H7BZ55 1655 aa33.64■■■□□ 2.98
GFRA3-202ENST00000378362 ESF1Q9H501 851 aaKnown RBP33.6■■■□□ 2.97
GFRA3-202ENST00000378362 PTPRKQ15262 1439 aa33.58■■■□□ 2.97
GFRA3-202ENST00000378362 SHANK2Q9UPX8 1470 aa33.56■■■□□ 2.96
GFRA3-202ENST00000378362 KIF15Q9NS87 1388 aa33.56■■■□□ 2.96
GFRA3-202ENST00000378362 NCOA1Q15788 1441 aa33.49■■■□□ 2.95
GFRA3-202ENST00000378362 ANKRD30AQ9BXX3 1397 aa33.49■■■□□ 2.95
GFRA3-202ENST00000378362 CLTCQ00610 1675 aaKnown RBP33.47■■■□□ 2.95
GFRA3-202ENST00000378362 DUOX2Q9NRD8 1548 aa33.46■■■□□ 2.95
GFRA3-202ENST00000378362 RRBP1Q9P2E9 1410 aaKnown RBP33.45■■■□□ 2.95
GFRA3-202ENST00000378362 C3P01024 1663 aa33.43■■■□□ 2.94
GFRA3-202ENST00000378362 ZMYM3Q14202 1370 aa33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms