RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 CAMSAP2Q08AD1 1489 aa31.65■■■□□ 2.66
RNF38-205ENST00000377877 PREX2Q70Z35 1606 aa31.64■■■□□ 2.66
RNF38-205ENST00000377877 MYO5CQ9NQX4 1742 aa31.62■■■□□ 2.65
RNF38-205ENST00000377877 PLCH2O75038 1416 aa31.61■■■□□ 2.65
RNF38-205ENST00000377877 MAPKBP1O60336 1514 aa31.58■■■□□ 2.65
RNF38-205ENST00000377877 ABCA9Q8IUA7 1624 aa31.58■■■□□ 2.65
RNF38-205ENST00000377877 CHIC2Q9UKJ5 165 aa31.57■■■□□ 2.65
RNF38-205ENST00000377877 ARHGAP5Q13017 1502 aa31.57■■■□□ 2.65
RNF38-205ENST00000377877 ABCC5O15440 1437 aa31.56■■■□□ 2.64
RNF38-205ENST00000377877 SAMD9LQ8IVG5 1584 aa31.54■■■□□ 2.64
RNF38-205ENST00000377877 HNRNPMP52272 730 aaKnown RBP eCLIP31.54■■■□□ 2.64
RNF38-205ENST00000377877 DAPK1P53355 1430 aa31.54■■■□□ 2.64
RNF38-205ENST00000377877 DNMT1P26358 1616 aaKnown RBP31.52■■■□□ 2.64
RNF38-205ENST00000377877 EFCAB2Q5VUJ9 269 aa31.52■■■□□ 2.64
RNF38-205ENST00000377877 DNAJC5Q9H3Z4 198 aa31.49■■■□□ 2.63
RNF38-205ENST00000377877 SETD5Q9C0A6 1442 aa31.47■■■□□ 2.63
RNF38-205ENST00000377877 MBD5Q9P267 1494 aa31.47■■■□□ 2.63
RNF38-205ENST00000377877 RRP7BPQ9NSQ0 103 aa31.46■■■□□ 2.63
RNF38-205ENST00000377877 RAB3GAP2Q9H2M9 1393 aa31.44■■■□□ 2.62
RNF38-205ENST00000377877 ARAP3Q8WWN8 1544 aa31.43■■■□□ 2.62
RNF38-205ENST00000377877 CD109Q6YHK3 1445 aa31.43■■■□□ 2.62
RNF38-205ENST00000377877 ARHGEF12Q9NZN5 1544 aa31.41■■■□□ 2.62
RNF38-205ENST00000377877 SYCP2Q9BX26 1530 aa31.4■■■□□ 2.62
RNF38-205ENST00000377877 AKNAQ7Z591 1439 aa31.4■■■□□ 2.62
RNF38-205ENST00000377877 HFM1A2PYH4 1435 aa31.39■■■□□ 2.62
RNF38-205ENST00000377877 FANCAO15360 1455 aa31.39■■■□□ 2.62
RNF38-205ENST00000377877 NAIPQ13075 1403 aa31.39■■■□□ 2.62
RNF38-205ENST00000377877 KIAA1107Q9UPP5 1409 aa31.38■■■□□ 2.61
RNF38-205ENST00000377877 FAM69CQ0P6D2 419 aa31.38■■■□□ 2.61
RNF38-205ENST00000377877 CCER1Q8TC90 406 aaPredicted RBP31.38■■■□□ 2.61
RNF38-205ENST00000377877 ARHGEF5Q12774 1597 aa31.38■■■□□ 2.61
RNF38-205ENST00000377877 CROCC2H7BZ55 1655 aa31.36■■■□□ 2.61
RNF38-205ENST00000377877 PLEKHH2Q8IVE3 1493 aa31.36■■■□□ 2.61
RNF38-205ENST00000377877 RSPH4AQ5TD94 716 aa31.35■■■□□ 2.61
RNF38-205ENST00000377877 TSPY4P0CV99 314 aa31.34■■■□□ 2.61
RNF38-205ENST00000377877 TSPY10P0CW01 314 aa31.34■■■□□ 2.61
RNF38-205ENST00000377877 ROCK1Q13464 1354 aa31.34■■■□□ 2.61
RNF38-205ENST00000377877 GLI2P10070 1586 aa31.33■■■□□ 2.61
RNF38-205ENST00000377877 ABCC1P33527 1531 aa31.33■■■□□ 2.61
RNF38-205ENST00000377877 DIP2BQ9P265 1576 aa31.32■■■□□ 2.61
RNF38-205ENST00000377877 CCDC141Q6ZP82 1450 aa31.32■■■□□ 2.6
RNF38-205ENST00000377877 NCOA1Q15788 1441 aa31.31■■■□□ 2.6
RNF38-205ENST00000377877 C9orf84Q5VXU9 1444 aa31.3■■■□□ 2.6
RNF38-205ENST00000377877 TRAPPC8Q9Y2L5 1435 aa31.3■■■□□ 2.6
RNF38-205ENST00000377877 MAP3K4Q9Y6R4 1608 aa31.29■■■□□ 2.6
RNF38-205ENST00000377877 SHANK2Q9UPX8 1470 aa31.27■■■□□ 2.6
RNF38-205ENST00000377877 AFAP1Q8N556 730 aa31.27■■■□□ 2.6
RNF38-205ENST00000377877 ADGRL2O95490 1459 aa31.26■■■□□ 2.59
RNF38-205ENST00000377877 SCAPERQ9BY12 1400 aa31.25■■■□□ 2.59
RNF38-205ENST00000377877 ADGBQ8N7X0 1667 aa31.25■■■□□ 2.59
RNF38-205ENST00000377877 KDM6BO15054 1643 aa31.25■■■□□ 2.59
RNF38-205ENST00000377877 ADGRL1O94910 1474 aa31.24■■■□□ 2.59
RNF38-205ENST00000377877 GCC2Q8IWJ2 1684 aa31.24■■■□□ 2.59
RNF38-205ENST00000377877 ANKRD30AQ9BXX3 1397 aa31.24■■■□□ 2.59
RNF38-205ENST00000377877 DHX57Q6P158 1386 aaKnown RBP31.23■■■□□ 2.59
RNF38-205ENST00000377877 KIF13AQ9H1H9 1805 aa31.18■■■□□ 2.58
RNF38-205ENST00000377877 TSPOAP1O95153 1857 aa31.16■■■□□ 2.58
RNF38-205ENST00000377877 MAST1Q9Y2H9 1570 aa31.16■■■□□ 2.58
RNF38-205ENST00000377877 CFAP74Q9C0B2 1584 aa31.15■■■□□ 2.58
RNF38-205ENST00000377877 NEO1Q92859 1461 aa31.15■■■□□ 2.58
RNF38-205ENST00000377877 SPAG9O60271 1321 aaKnown RBP31.13■■■□□ 2.57
RNF38-205ENST00000377877 KIF15Q9NS87 1388 aa31.13■■■□□ 2.57
RNF38-205ENST00000377877 PPRC1Q5VV67 1664 aaKnown RBP31.11■■■□□ 2.57
RNF38-205ENST00000377877 ZEB1P37275 1124 aaPredicted RBP31.1■■■□□ 2.57
RNF38-205ENST00000377877 ANKRD50Q9ULJ7 1429 aa31.08■■■□□ 2.57
RNF38-205ENST00000377877 TRIM52Q96A61 297 aa31.07■■■□□ 2.56
RNF38-205ENST00000377877 RAPGEF3O95398 923 aa31.06■■■□□ 2.56
RNF38-205ENST00000377877 RTEL1-TNFRSF6BF6WH68 1400 aa31.05■■■□□ 2.56
RNF38-205ENST00000377877 POGZQ7Z3K3 1410 aa31.04■■■□□ 2.56
RNF38-205ENST00000377877 PLXNC1O60486 1568 aa31.03■■■□□ 2.56
RNF38-205ENST00000377877 ZNF518AQ6AHZ1 1483 aa31.03■■■□□ 2.56
RNF38-205ENST00000377877 MYT1LQ9UL68 1186 aa31.02■■■□□ 2.56
RNF38-205ENST00000377877 ZFYVE16Q7Z3T8 1539 aa31.02■■■□□ 2.56
RNF38-205ENST00000377877 DENND4BO75064 1496 aaPredicted RBP31.01■■■□□ 2.55
RNF38-205ENST00000377877 ATP7AQ04656 1500 aa30.99■■■□□ 2.55
RNF38-205ENST00000377877 INO80Q9ULG1 1556 aaPredicted RBP30.99■■■□□ 2.55
RNF38-205ENST00000377877 TEX14Q8IWB6 1497 aa30.98■■■□□ 2.55
RNF38-205ENST00000377877 KDM5CP41229 1560 aa30.96■■■□□ 2.55
RNF38-205ENST00000377877 KIDINS220Q9ULH0 1771 aa30.95■■■□□ 2.55
RNF38-205ENST00000377877 DUOX2Q9NRD8 1548 aa30.94■■■□□ 2.54
RNF38-205ENST00000377877 CLSPNQ9HAW4 1339 aa30.94■■■□□ 2.54
RNF38-205ENST00000377877 TRHP20396 242 aaPredicted RBP30.94■■■□□ 2.54
RNF38-205ENST00000377877 MPHOSPH9Q99550 1183 aa30.94■■■□□ 2.54
RNF38-205ENST00000377877 RICTORQ6R327 1708 aa30.92■■■□□ 2.54
RNF38-205ENST00000377877 MLH3Q9UHC1 1453 aa30.91■■■□□ 2.54
RNF38-205ENST00000377877 ACIN1Q9UKV3 1341 aaKnown RBP30.9■■■□□ 2.54
RNF38-205ENST00000377877 FRMPD1Q5SYB0 1578 aa30.87■■■□□ 2.53
RNF38-205ENST00000377877 COL17A1Q9UMD9 1497 aaPredicted RBP30.86■■■□□ 2.53
RNF38-205ENST00000377877 NUP155O75694 1391 aa30.86■■■□□ 2.53
RNF38-205ENST00000377877 HECW2Q9P2P5 1572 aa30.85■■■□□ 2.53
RNF38-205ENST00000377877 PZPP20742 1482 aa30.85■■■□□ 2.53
RNF38-205ENST00000377877 SLC4A1APQ9BWU0 796 aaKnown RBP30.85■■■□□ 2.53
RNF38-205ENST00000377877 ERBINQ96RT1 1412 aa30.85■■■□□ 2.53
RNF38-205ENST00000377877 FOXD1Q16676 465 aa30.84■■■□□ 2.53
RNF38-205ENST00000377877 DHX29Q7Z478 1369 aaKnown RBP30.83■■■□□ 2.53
RNF38-205ENST00000377877 SIN3AQ96ST3 1273 aa30.83■■■□□ 2.53
RNF38-205ENST00000377877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.81■■■□□ 2.52
RNF38-205ENST00000377877 ABCA6Q8N139 1617 aa30.78■■■□□ 2.52
RNF38-205ENST00000377877 YEATS2Q9ULM3 1422 aa30.78■■■□□ 2.52
RNF38-205ENST00000377877 A2MP01023 1474 aa30.76■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms