RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 DAPK1P53355 1430 aa7.69□□□□□ -1.18
CUBN-202ENST00000377833 TMF1P82094 1093 aa7.68□□□□□ -1.18
CUBN-202ENST00000377833 LMOD3Q0VAK6 560 aa7.68□□□□□ -1.18
CUBN-202ENST00000377833 DNMBPQ6XZF7 1577 aa7.68□□□□□ -1.18
CUBN-202ENST00000377833 LAMC3Q9Y6N6 1575 aa7.68□□□□□ -1.18
CUBN-202ENST00000377833 CTTNBP2Q8WZ74 1663 aa7.68□□□□□ -1.18
CUBN-202ENST00000377833 PEG3Q9GZU2 1588 aa7.67□□□□□ -1.18
CUBN-202ENST00000377833 ROCK1Q13464 1354 aa7.67□□□□□ -1.18
CUBN-202ENST00000377833 CCDC144AA2RUR9 1427 aa7.67□□□□□ -1.18
CUBN-202ENST00000377833 RRBP1Q9P2E9 1410 aaKnown RBP7.67□□□□□ -1.18
CUBN-202ENST00000377833 MYOM3Q5VTT5 1437 aa7.67□□□□□ -1.18
CUBN-202ENST00000377833 PDE3BQ13370 1112 aa7.66□□□□□ -1.18
CUBN-202ENST00000377833 ATAD2BQ9ULI0 1458 aa7.66□□□□□ -1.18
CUBN-202ENST00000377833 PHF14O94880 888 aa7.66□□□□□ -1.18
CUBN-202ENST00000377833 SPAG9O60271 1321 aaKnown RBP7.66□□□□□ -1.18
CUBN-202ENST00000377833 CARD11Q9BXL7 1154 aa7.66□□□□□ -1.18
CUBN-202ENST00000377833 GPATCH3Q96I76 525 aa7.66□□□□□ -1.18
CUBN-202ENST00000377833 NINLQ9Y2I6 1382 aa7.65□□□□□ -1.18
CUBN-202ENST00000377833 CSPP1Q1MSJ5 1256 aa7.65□□□□□ -1.18
CUBN-202ENST00000377833 SOGA1O94964 1423 aa7.65□□□□□ -1.18
CUBN-202ENST00000377833 MIA2Q96PC5 1412 aa7.65□□□□□ -1.18
CUBN-202ENST00000377833 CNTLNQ9NXG0 1405 aa7.64□□□□□ -1.19
CUBN-202ENST00000377833 CCDC141Q6ZP82 1450 aa7.64□□□□□ -1.19
CUBN-202ENST00000377833 CECR2Q9BXF3 1484 aa7.64□□□□□ -1.19
CUBN-202ENST00000377833 NCAPD3P42695 1498 aa7.64□□□□□ -1.19
CUBN-202ENST00000377833 KIF14Q15058 1648 aa7.64□□□□□ -1.19
CUBN-202ENST00000377833 UNC13AQ9UPW8 1703 aa7.64□□□□□ -1.19
CUBN-202ENST00000377833 FANCD2Q9BXW9 1451 aa7.64□□□□□ -1.19
CUBN-202ENST00000377833 MAP3K1Q13233 1512 aa7.64□□□□□ -1.19
CUBN-202ENST00000377833 TERF2IPQ9NYB0 399 aa7.63□□□□□ -1.19
CUBN-202ENST00000377833 KIF15Q9NS87 1388 aa7.63□□□□□ -1.19
CUBN-202ENST00000377833 HMMRO75330 724 aa7.63□□□□□ -1.19
CUBN-202ENST00000377833 LRRFIP1Q32MZ4 808 aaKnown RBP7.63□□□□□ -1.19
CUBN-202ENST00000377833 WASHC2AQ641Q2 1341 aa7.63□□□□□ -1.19
CUBN-202ENST00000377833 FKBP8Q14318 412 aa7.63□□□□□ -1.19
CUBN-202ENST00000377833 PPP4R2Q9NY27 417 aa7.62□□□□□ -1.19
CUBN-202ENST00000377833 ATP6V1DQ9Y5K8 247 aa7.62□□□□□ -1.19
CUBN-202ENST00000377833 KIAA2012Q0VF49 1180 aa7.62□□□□□ -1.19
CUBN-202ENST00000377833 HSCBQ8IWL3 235 aa7.62□□□□□ -1.19
CUBN-202ENST00000377833 C14orf37Q86TY3 774 aa7.61□□□□□ -1.19
CUBN-202ENST00000377833 GAPVD1Q14C86 1478 aa7.61□□□□□ -1.19
CUBN-202ENST00000377833 IL27Q8NEV9 243 aa7.61□□□□□ -1.19
CUBN-202ENST00000377833 BIVM-ERCC5R4GMW8 1640 aa7.61□□□□□ -1.19
CUBN-202ENST00000377833 CASKIN1Q8WXD9 1431 aa7.61□□□□□ -1.19
CUBN-202ENST00000377833 SYNJ2O15056 1496 aa7.61□□□□□ -1.19
CUBN-202ENST00000377833 GBP4Q96PP9 640 aa7.61□□□□□ -1.19
CUBN-202ENST00000377833 POGKQ9P215 609 aa7.61□□□□□ -1.19
CUBN-202ENST00000377833 CCDC7Q96M83 1385 aa7.6□□□□□ -1.19
CUBN-202ENST00000377833 P3H3Q8IVL6 736 aa7.6□□□□□ -1.19
CUBN-202ENST00000377833 CHGAP10645 457 aaKnown RBP7.6□□□□□ -1.19
CUBN-202ENST00000377833 HDGFL2Q7Z4V5 671 aaPredicted RBP7.6□□□□□ -1.19
CUBN-202ENST00000377833 PTMAP06454 111 aaKnown RBP7.6□□□□□ -1.19
CUBN-202ENST00000377833 GRIN2BQ13224 1484 aa7.6□□□□□ -1.19
CUBN-202ENST00000377833 FAM9BQ8IZU0 186 aa7.6□□□□□ -1.19
CUBN-202ENST00000377833 EFCAB2Q5VUJ9 269 aa7.6□□□□□ -1.19
CUBN-202ENST00000377833 PLPPR3Q6T4P5 718 aa7.6□□□□□ -1.19
CUBN-202ENST00000377833 AQRO60306 1485 aaKnown RBP eCLIP7.6□□□□□ -1.19
CUBN-202ENST00000377833 GOLGA2Q08379 1002 aa7.59□□□□□ -1.19
CUBN-202ENST00000377833 IQGAP2Q13576 1575 aa7.59□□□□□ -1.19
CUBN-202ENST00000377833 DHX8Q14562 1220 aaKnown RBP7.59□□□□□ -1.19
CUBN-202ENST00000377833 IFT140Q96RY7 1462 aa7.59□□□□□ -1.19
CUBN-202ENST00000377833 NESP48681 1621 aa7.59□□□□□ -1.2
CUBN-202ENST00000377833 GOLGA6L4A6NEF3 574 aa7.58□□□□□ -1.2
CUBN-202ENST00000377833 CGNL1Q0VF96 1302 aa7.58□□□□□ -1.2
CUBN-202ENST00000377833 EIF2AK4Q9P2K8 1649 aaKnown RBP7.58□□□□□ -1.2
CUBN-202ENST00000377833 TIAM1Q13009 1591 aa7.58□□□□□ -1.2
CUBN-202ENST00000377833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.58□□□□□ -1.2
CUBN-202ENST00000377833 CNGB1Q14028 1251 aaPredicted RBP7.58□□□□□ -1.2
CUBN-202ENST00000377833 MRC2Q9UBG0 1479 aa7.57□□□□□ -1.2
CUBN-202ENST00000377833 TPM4P67936 248 aa7.57□□□□□ -1.2
CUBN-202ENST00000377833 SNAPC4Q5SXM2 1469 aa7.57□□□□□ -1.2
CUBN-202ENST00000377833 DDX10Q13206 875 aaKnown RBP7.57□□□□□ -1.2
CUBN-202ENST00000377833 GOLGA6L1Q8N7Z2 621 aa7.57□□□□□ -1.2
CUBN-202ENST00000377833 ANKRD30BQ9BXX2 1392 aa7.57□□□□□ -1.2
CUBN-202ENST00000377833 KIAA1211Q6ZU35 1233 aa7.56□□□□□ -1.2
CUBN-202ENST00000377833 CFTRP13569 1480 aa7.56□□□□□ -1.2
CUBN-202ENST00000377833 FGD5Q6ZNL6 1462 aa7.56□□□□□ -1.2
CUBN-202ENST00000377833 HFM1A2PYH4 1435 aa7.56□□□□□ -1.2
CUBN-202ENST00000377833 TMX4Q9H1E5 349 aaPredicted RBP7.56□□□□□ -1.2
CUBN-202ENST00000377833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.56□□□□□ -1.2
CUBN-202ENST00000377833 FGD1P98174 961 aa7.56□□□□□ -1.2
CUBN-202ENST00000377833 NLRP13Q86W25 1043 aa7.56□□□□□ -1.2
CUBN-202ENST00000377833 FHOD3Q2V2M9 1422 aa7.56□□□□□ -1.2
CUBN-202ENST00000377833 CFAP43Q8NDM7 1665 aa7.56□□□□□ -1.2
CUBN-202ENST00000377833 KIF16BQ96L93 1317 aa7.55□□□□□ -1.2
CUBN-202ENST00000377833 RWDD1Q9H446 243 aaPredicted RBP7.55□□□□□ -1.2
CUBN-202ENST00000377833 FGD6Q6ZV73 1430 aa7.55□□□□□ -1.2
CUBN-202ENST00000377833 PDIA4P13667 645 aaKnown RBP7.55□□□□□ -1.2
CUBN-202ENST00000377833 MSNP26038 577 aaKnown RBP7.55□□□□□ -1.2
CUBN-202ENST00000377833 MAGI1Q96QZ7 1491 aaPredicted RBP7.55□□□□□ -1.2
CUBN-202ENST00000377833 SYNJ1O43426 1573 aa7.54□□□□□ -1.2
CUBN-202ENST00000377833 TCERG1O14776 1098 aaKnown RBP7.54□□□□□ -1.2
CUBN-202ENST00000377833 NUP155O75694 1391 aa7.54□□□□□ -1.2
CUBN-202ENST00000377833 WASHC2CQ9Y4E1 1318 aa7.54□□□□□ -1.2
CUBN-202ENST00000377833 PMFBP1Q8TBY8 1022 aa7.54□□□□□ -1.2
CUBN-202ENST00000377833 OS9Q13438 667 aaPredicted RBP7.54□□□□□ -1.2
CUBN-202ENST00000377833 CHIC2Q9UKJ5 165 aa7.53□□□□□ -1.2
CUBN-202ENST00000377833 NCOA2Q15596 1464 aa7.53□□□□□ -1.2
CUBN-202ENST00000377833 FAM135AQ9P2D6 1515 aa7.53□□□□□ -1.2
CUBN-202ENST00000377833 DDX11L8A8MPP1 907 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms