RNA–Protein interactions for RNA: ENST00000377399.2

SPSB1-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-203ENST00000377399 MYOM3Q5VTT5 1437 aa29.5■■■□□ 2.31
SPSB1-203ENST00000377399 CDC42BPAQ5VT25 1732 aa29.48■■■□□ 2.31
SPSB1-203ENST00000377399 PREX2Q70Z35 1606 aa29.48■■■□□ 2.31
SPSB1-203ENST00000377399 GPATCH8Q9UKJ3 1502 aaKnown RBP29.46■■■□□ 2.31
SPSB1-203ENST00000377399 ARHGAP5Q13017 1502 aa29.42■■■□□ 2.3
SPSB1-203ENST00000377399 PLCH2O75038 1416 aa29.42■■■□□ 2.3
SPSB1-203ENST00000377399 ARAP3Q8WWN8 1544 aa29.41■■■□□ 2.3
SPSB1-203ENST00000377399 CDC42BPBQ9Y5S2 1711 aa29.4■■■□□ 2.3
SPSB1-203ENST00000377399 FGD6Q6ZV73 1430 aa29.4■■■□□ 2.3
SPSB1-203ENST00000377399 MIA2Q96PC5 1412 aa29.4■■■□□ 2.3
SPSB1-203ENST00000377399 CFDP1Q9UEE9 299 aaPredicted RBP29.4■■■□□ 2.3
SPSB1-203ENST00000377399 PTPN23Q9H3S7 1636 aa29.34■■■□□ 2.29
SPSB1-203ENST00000377399 CFAP74Q9C0B2 1584 aa29.34■■■□□ 2.29
SPSB1-203ENST00000377399 EFCAB2Q5VUJ9 269 aa29.33■■■□□ 2.29
SPSB1-203ENST00000377399 RRBP1Q9P2E9 1410 aaKnown RBP29.33■■■□□ 2.29
SPSB1-203ENST00000377399 FANCAO15360 1455 aa29.32■■■□□ 2.28
SPSB1-203ENST00000377399 ZNF777Q9ULD5 760 aaPredicted RBP29.32■■■□□ 2.28
SPSB1-203ENST00000377399 CAMSAP2Q08AD1 1489 aa29.29■■■□□ 2.28
SPSB1-203ENST00000377399 TCOF1Q13428 1488 aaKnown RBP29.28■■■□□ 2.28
SPSB1-203ENST00000377399 FAM50AQ14320 339 aaKnown RBP29.27■■■□□ 2.28
SPSB1-203ENST00000377399 SAMD9LQ8IVG5 1584 aa29.26■■■□□ 2.28
SPSB1-203ENST00000377399 PLEKHH2Q8IVE3 1493 aa29.25■■■□□ 2.27
SPSB1-203ENST00000377399 NEO1Q92859 1461 aa29.25■■■□□ 2.27
SPSB1-203ENST00000377399 ZNF644Q9H582 1327 aaPredicted RBP29.21■■■□□ 2.27
SPSB1-203ENST00000377399 ABCC1P33527 1531 aa29.21■■■□□ 2.27
SPSB1-203ENST00000377399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.21■■■□□ 2.27
SPSB1-203ENST00000377399 AKNAQ7Z591 1439 aa29.2■■■□□ 2.27
SPSB1-203ENST00000377399 SYCP2Q9BX26 1530 aa29.19■■■□□ 2.26
SPSB1-203ENST00000377399 TRIM26Q12899 539 aaPredicted RBP29.17■■■□□ 2.26
SPSB1-203ENST00000377399 KIAA1107Q9UPP5 1409 aa29.17■■■□□ 2.26
SPSB1-203ENST00000377399 HECW2Q9P2P5 1572 aa29.16■■■□□ 2.26
SPSB1-203ENST00000377399 RAPGEF3O95398 923 aa29.13■■■□□ 2.25
SPSB1-203ENST00000377399 SCAPERQ9BY12 1400 aa29.12■■■□□ 2.25
SPSB1-203ENST00000377399 ARHGEF5Q12774 1597 aa29.12■■■□□ 2.25
SPSB1-203ENST00000377399 DNMT1P26358 1616 aaKnown RBP29.12■■■□□ 2.25
SPSB1-203ENST00000377399 HNRNPMP52272 730 aaKnown RBP eCLIP29.1■■■□□ 2.25
SPSB1-203ENST00000377399 CCDC141Q6ZP82 1450 aa29.1■■■□□ 2.25
SPSB1-203ENST00000377399 ARHGEF12Q9NZN5 1544 aa29.09■■■□□ 2.25
SPSB1-203ENST00000377399 MBD5Q9P267 1494 aa29.08■■■□□ 2.25
SPSB1-203ENST00000377399 DENND4BO75064 1496 aaPredicted RBP29.07■■■□□ 2.24
SPSB1-203ENST00000377399 DAPK1P53355 1430 aa29.07■■■□□ 2.24
SPSB1-203ENST00000377399 RSPH4AQ5TD94 716 aa29.07■■■□□ 2.24
SPSB1-203ENST00000377399 ITGAEP38570 1179 aa29.06■■■□□ 2.24
SPSB1-203ENST00000377399 CROCC2H7BZ55 1655 aa29.05■■■□□ 2.24
SPSB1-203ENST00000377399 ILDR1Q86SU0 546 aaPredicted RBP29.04■■■□□ 2.24
SPSB1-203ENST00000377399 ZNF518AQ6AHZ1 1483 aa29.04■■■□□ 2.24
SPSB1-203ENST00000377399 POGZQ7Z3K3 1410 aa29.03■■■□□ 2.24
SPSB1-203ENST00000377399 TRAPPC8Q9Y2L5 1435 aa29.03■■■□□ 2.24
SPSB1-203ENST00000377399 ABCC5O15440 1437 aa29.03■■■□□ 2.24
SPSB1-203ENST00000377399 SHANK2Q9UPX8 1470 aa29.01■■■□□ 2.23
SPSB1-203ENST00000377399 TSPY4P0CV99 314 aa28.99■■■□□ 2.23
SPSB1-203ENST00000377399 TSPY10P0CW01 314 aa28.99■■■□□ 2.23
SPSB1-203ENST00000377399 FRMPD1Q5SYB0 1578 aa28.98■■■□□ 2.23
SPSB1-203ENST00000377399 RICTORQ6R327 1708 aa28.97■■■□□ 2.23
SPSB1-203ENST00000377399 ARID4BQ4LE39 1312 aaPredicted RBP28.96■■■□□ 2.23
SPSB1-203ENST00000377399 ADAMTSL3P82987 1691 aa28.96■■■□□ 2.23
SPSB1-203ENST00000377399 C9orf84Q5VXU9 1444 aa28.96■■■□□ 2.23
SPSB1-203ENST00000377399 AFAP1Q8N556 730 aa28.95■■■□□ 2.22
SPSB1-203ENST00000377399 PTPRMP28827 1452 aa28.95■■■□□ 2.22
SPSB1-203ENST00000377399 KDM5CP41229 1560 aa28.95■■■□□ 2.22
SPSB1-203ENST00000377399 MAST1Q9Y2H9 1570 aa28.95■■■□□ 2.22
SPSB1-203ENST00000377399 ADGBQ8N7X0 1667 aa28.94■■■□□ 2.22
SPSB1-203ENST00000377399 PTPRKQ15262 1439 aa28.93■■■□□ 2.22
SPSB1-203ENST00000377399 SPAG9O60271 1321 aaKnown RBP28.93■■■□□ 2.22
SPSB1-203ENST00000377399 CHIC2Q9UKJ5 165 aa28.92■■■□□ 2.22
SPSB1-203ENST00000377399 MYT1LQ9UL68 1186 aa28.91■■■□□ 2.22
SPSB1-203ENST00000377399 PCGF6Q9BYE7 350 aa28.9■■■□□ 2.22
SPSB1-203ENST00000377399 ZFYVE16Q7Z3T8 1539 aa28.89■■■□□ 2.22
SPSB1-203ENST00000377399 BCORL1Q5H9F3 1711 aa28.89■■■□□ 2.22
SPSB1-203ENST00000377399 INO80Q9ULG1 1556 aaPredicted RBP28.89■■■□□ 2.22
SPSB1-203ENST00000377399 ATP7AQ04656 1500 aa28.89■■■□□ 2.21
SPSB1-203ENST00000377399 ZMYM4Q5VZL5 1548 aa28.89■■■□□ 2.21
SPSB1-203ENST00000377399 ADGRL2O95490 1459 aa28.88■■■□□ 2.21
SPSB1-203ENST00000377399 ANKRD30AQ9BXX3 1397 aa28.88■■■□□ 2.21
SPSB1-203ENST00000377399 RTEL1-TNFRSF6BF6WH68 1400 aa28.87■■■□□ 2.21
SPSB1-203ENST00000377399 ROCK1Q13464 1354 aa28.87■■■□□ 2.21
SPSB1-203ENST00000377399 ARHGEF40Q8TER5 1519 aa28.86■■■□□ 2.21
SPSB1-203ENST00000377399 MLH3Q9UHC1 1453 aa28.85■■■□□ 2.21
SPSB1-203ENST00000377399 PLXNC1O60486 1568 aa28.84■■■□□ 2.21
SPSB1-203ENST00000377399 KIDINS220Q9ULH0 1771 aa28.83■■■□□ 2.21
SPSB1-203ENST00000377399 MADDQ8WXG6 1647 aa28.81■■■□□ 2.2
SPSB1-203ENST00000377399 MAGI2Q86UL8 1455 aa28.81■■■□□ 2.2
SPSB1-203ENST00000377399 NCOA1Q15788 1441 aa28.8■■■□□ 2.2
SPSB1-203ENST00000377399 RRP7BPQ9NSQ0 103 aa28.79■■■□□ 2.2
SPSB1-203ENST00000377399 KIF15Q9NS87 1388 aa28.78■■■□□ 2.2
SPSB1-203ENST00000377399 HFM1A2PYH4 1435 aa28.77■■■□□ 2.2
SPSB1-203ENST00000377399 GCC2Q8IWJ2 1684 aa28.77■■■□□ 2.2
SPSB1-203ENST00000377399 ABCA6Q8N139 1617 aa28.76■■■□□ 2.19
SPSB1-203ENST00000377399 YEATS2Q9ULM3 1422 aa28.73■■■□□ 2.19
SPSB1-203ENST00000377399 DIP2CQ9Y2E4 1556 aa28.73■■■□□ 2.19
SPSB1-203ENST00000377399 DUOX2Q9NRD8 1548 aa28.73■■■□□ 2.19
SPSB1-203ENST00000377399 NAIPQ13075 1403 aa28.72■■■□□ 2.19
SPSB1-203ENST00000377399 RIMS1Q86UR5 1692 aaKnown RBP28.7■■■□□ 2.19
SPSB1-203ENST00000377399 SETD5Q9C0A6 1442 aa28.69■■■□□ 2.18
SPSB1-203ENST00000377399 ANKRD50Q9ULJ7 1429 aa28.68■■■□□ 2.18
SPSB1-203ENST00000377399 A2MP01023 1474 aa28.67■■■□□ 2.18
SPSB1-203ENST00000377399 LMTK3Q96Q04 1460 aa28.66■■■□□ 2.18
SPSB1-203ENST00000377399 ERBINQ96RT1 1412 aa28.66■■■□□ 2.18
SPSB1-203ENST00000377399 ATP10AO60312 1499 aa28.66■■■□□ 2.18
SPSB1-203ENST00000377399 DHX29Q7Z478 1369 aaKnown RBP28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms