RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 FAM9BQ8IZU0 186 aa25.14■■□□□ 1.62
SF1-203ENST00000377387 NBPF8Q3BBV2 869 aa25.14■■□□□ 1.61
SF1-203ENST00000377387 ZNF777Q9ULD5 760 aaPredicted RBP25.13■■□□□ 1.61
SF1-203ENST00000377387 IFT140Q96RY7 1462 aa25.11■■□□□ 1.61
SF1-203ENST00000377387 POLR3GLQ9BT43 218 aa25.1■■□□□ 1.61
SF1-203ENST00000377387 RBM19Q9Y4C8 960 aaKnown RBP25.1■■□□□ 1.61
SF1-203ENST00000377387 MIA2Q96PC5 1412 aa25.1■■□□□ 1.61
SF1-203ENST00000377387 ZNF326Q5BKZ1 582 aaKnown RBP25.09■■□□□ 1.61
SF1-203ENST00000377387 WDR62O43379 1518 aa25.08■■□□□ 1.61
SF1-203ENST00000377387 GCC2Q8IWJ2 1684 aa25.08■■□□□ 1.61
SF1-203ENST00000377387 DISP1Q96F81 1524 aa25.07■■□□□ 1.6
SF1-203ENST00000377387 DAPK1P53355 1430 aa25.05■■□□□ 1.6
SF1-203ENST00000377387 EIF4G3O43432 1585 aaKnown RBP25.05■■□□□ 1.6
SF1-203ENST00000377387 MRS2Q9HD23 443 aa25.05■■□□□ 1.6
SF1-203ENST00000377387 ABCC5O15440 1437 aa25.04■■□□□ 1.6
SF1-203ENST00000377387 ANP32EQ9BTT0 268 aa25.03■■□□□ 1.6
SF1-203ENST00000377387 GRIN2AQ12879 1464 aa25.03■■□□□ 1.6
SF1-203ENST00000377387 CDK11AQ9UQ88 783 aaPredicted RBP25.03■■□□□ 1.6
SF1-203ENST00000377387 ANKRD30BQ9BXX2 1392 aa25.02■■□□□ 1.6
SF1-203ENST00000377387 PRKRIP1Q9H875 184 aaPredicted RBP25.02■■□□□ 1.6
SF1-203ENST00000377387 CFDP1Q9UEE9 299 aaPredicted RBP25.02■■□□□ 1.6
SF1-203ENST00000377387 CCDC7Q96M83 1385 aa25.02■■□□□ 1.6
SF1-203ENST00000377387 AKNAQ7Z591 1439 aa25.02■■□□□ 1.6
SF1-203ENST00000377387 KIAA0586Q9BVV6 1533 aa25.02■■□□□ 1.6
SF1-203ENST00000377387 NUP153P49790 1475 aaKnown RBP25.01■■□□□ 1.59
SF1-203ENST00000377387 PRG4Q92954 1404 aaPredicted RBP25.01■■□□□ 1.59
SF1-203ENST00000377387 CNTLNQ9NXG0 1405 aa25.01■■□□□ 1.59
SF1-203ENST00000377387 PLB1Q6P1J6 1458 aa24.99■■□□□ 1.59
SF1-203ENST00000377387 KIAA0556O60303 1618 aa24.98■■□□□ 1.59
SF1-203ENST00000377387 SENP3-EIF4A1A0A087X0R7 540 aa24.98■■□□□ 1.59
SF1-203ENST00000377387 KIF7Q2M1P5 1343 aa24.96■■□□□ 1.59
SF1-203ENST00000377387 RPRD2Q5VT52 1461 aaKnown RBP24.94■■□□□ 1.58
SF1-203ENST00000377387 NCOA1Q15788 1441 aa24.93■■□□□ 1.58
SF1-203ENST00000377387 JPH4Q96JJ6 628 aa24.93■■□□□ 1.58
SF1-203ENST00000377387 ROCK1Q13464 1354 aa24.92■■□□□ 1.58
SF1-203ENST00000377387 PKD2Q13563 968 aa24.89■■□□□ 1.58
SF1-203ENST00000377387 CEP170Q5SW79 1584 aa24.89■■□□□ 1.58
SF1-203ENST00000377387 RAPGEF6Q8TEU7 1601 aa24.87■■□□□ 1.57
SF1-203ENST00000377387 TEX14Q8IWB6 1497 aa24.87■■□□□ 1.57
SF1-203ENST00000377387 DNMT1P26358 1616 aaKnown RBP24.86■■□□□ 1.57
SF1-203ENST00000377387 B4GALNT3Q6L9W6 998 aa24.82■■□□□ 1.56
SF1-203ENST00000377387 KDM2AQ9Y2K7 1162 aa24.82■■□□□ 1.56
SF1-203ENST00000377387 CAMSAP2Q08AD1 1489 aa24.82■■□□□ 1.56
SF1-203ENST00000377387 SYNJ2O15056 1496 aa24.81■■□□□ 1.56
SF1-203ENST00000377387 TROQ12816 1431 aaPredicted RBP24.81■■□□□ 1.56
SF1-203ENST00000377387 PZPP20742 1482 aa24.8■■□□□ 1.56
SF1-203ENST00000377387 SPATA31E1Q6ZUB1 1445 aa24.79■■□□□ 1.56
SF1-203ENST00000377387 KIF14Q15058 1648 aa24.79■■□□□ 1.56
SF1-203ENST00000377387 MAGI1Q96QZ7 1491 aaPredicted RBP24.77■■□□□ 1.56
SF1-203ENST00000377387 GPATCH8Q9UKJ3 1502 aaKnown RBP24.77■■□□□ 1.56
SF1-203ENST00000377387 PPP4R2Q9NY27 417 aa24.76■■□□□ 1.55
SF1-203ENST00000377387 ZBED9Q6R2W3 1325 aa24.76■■□□□ 1.55
SF1-203ENST00000377387 USP47Q96K76 1375 aa24.75■■□□□ 1.55
SF1-203ENST00000377387 PLEKHD1A6NEE1 506 aa24.75■■□□□ 1.55
SF1-203ENST00000377387 MSH5O43196 834 aa24.74■■□□□ 1.55
SF1-203ENST00000377387 NUP155O75694 1391 aa24.72■■□□□ 1.55
SF1-203ENST00000377387 ANKRD30AQ9BXX3 1397 aa24.72■■□□□ 1.55
SF1-203ENST00000377387 KIAA1107Q9UPP5 1409 aa24.72■■□□□ 1.55
SF1-203ENST00000377387 CARMIL2Q6F5E8 1435 aa24.72■■□□□ 1.55
SF1-203ENST00000377387 HNRNPMP52272 730 aaKnown RBP eCLIP24.7■■□□□ 1.54
SF1-203ENST00000377387 CARD11Q9BXL7 1154 aa24.7■■□□□ 1.54
SF1-203ENST00000377387 ANKRD50Q9ULJ7 1429 aa24.69■■□□□ 1.54
SF1-203ENST00000377387 TSPY4P0CV99 314 aa24.68■■□□□ 1.54
SF1-203ENST00000377387 TSPY10P0CW01 314 aa24.68■■□□□ 1.54
SF1-203ENST00000377387 NUP160Q12769 1436 aa24.66■■□□□ 1.54
SF1-203ENST00000377387 DCAF11Q8TEB1 546 aa24.65■■□□□ 1.54
SF1-203ENST00000377387 DHX29Q7Z478 1369 aaKnown RBP24.64■■□□□ 1.54
SF1-203ENST00000377387 TMC1Q8TDI8 760 aa24.62■■□□□ 1.53
SF1-203ENST00000377387 ST20-MTHFSA0A0A6YYL1 179 aa24.62■■□□□ 1.53
SF1-203ENST00000377387 ATP10BO94823 1461 aa24.62■■□□□ 1.53
SF1-203ENST00000377387 BCORL1Q5H9F3 1711 aa24.61■■□□□ 1.53
SF1-203ENST00000377387 ERICH6BQ5W0A0 696 aa24.61■■□□□ 1.53
SF1-203ENST00000377387 ITSN2Q9NZM3 1697 aa24.59■■□□□ 1.53
SF1-203ENST00000377387 ERICH6Q7L0X2 663 aa24.58■■□□□ 1.53
SF1-203ENST00000377387 RGL3Q3MIN7 710 aa24.58■■□□□ 1.53
SF1-203ENST00000377387 SALL2Q9Y467 1007 aaPredicted RBP24.58■■□□□ 1.52
SF1-203ENST00000377387 C9orf84Q5VXU9 1444 aa24.57■■□□□ 1.52
SF1-203ENST00000377387 MBD5Q9P267 1494 aa24.57■■□□□ 1.52
SF1-203ENST00000377387 ADGRL2O95490 1459 aa24.56■■□□□ 1.52
SF1-203ENST00000377387 ADGBQ8N7X0 1667 aa24.55■■□□□ 1.52
SF1-203ENST00000377387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.55■■□□□ 1.523e-9■■■■□ 19.4
SF1-203ENST00000377387 PTPRGP23470 1445 aa24.54■■□□□ 1.52
SF1-203ENST00000377387 NUDCQ9Y266 331 aa24.53■■□□□ 1.52
SF1-203ENST00000377387 KIF15Q9NS87 1388 aa24.52■■□□□ 1.52
SF1-203ENST00000377387 FANCIQ9NVI1 1328 aa24.52■■□□□ 1.52
SF1-203ENST00000377387 PNISRQ8TF01 805 aaKnown RBP24.52■■□□□ 1.52
SF1-203ENST00000377387 POLR1AO95602 1720 aaPredicted RBP24.51■■□□□ 1.51
SF1-203ENST00000377387 ABCA8O94911 1581 aa24.49■■□□□ 1.51
SF1-203ENST00000377387 KDM5CP41229 1560 aa24.48■■□□□ 1.51
SF1-203ENST00000377387 CROCC2H7BZ55 1655 aa24.48■■□□□ 1.51
SF1-203ENST00000377387 CCDC136Q96JN2 1154 aa24.48■■□□□ 1.51
SF1-203ENST00000377387 CDC42BPAQ5VT25 1732 aa24.47■■□□□ 1.51
SF1-203ENST00000377387 ROCK2O75116 1388 aaKnown RBP24.46■■□□□ 1.51
SF1-203ENST00000377387 SMG6Q86US8 1419 aaKnown RBP24.46■■□□□ 1.51
SF1-203ENST00000377387 ABCC10Q5T3U5 1492 aa24.46■■□□□ 1.51
SF1-203ENST00000377387 ADCY10Q96PN6 1610 aa24.45■■□□□ 1.51
SF1-203ENST00000377387 NBPF1Q3BBV0 1214 aa24.44■■□□□ 1.5
SF1-203ENST00000377387 ARID4BQ4LE39 1312 aaPredicted RBP24.43■■□□□ 1.5
SF1-203ENST00000377387 RALGAPBQ86X10 1494 aa24.43■■□□□ 1.5
SF1-203ENST00000377387 UHRF1BP1Q6BDS2 1440 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms