RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 AKNAQ7Z591 1439 aa24.27■■□□□ 1.48
TRIM27-201ENST00000377194 PRG4Q92954 1404 aaPredicted RBP24.26■■□□□ 1.47
TRIM27-201ENST00000377194 KCNH8Q96L42 1107 aa24.26■■□□□ 1.47
TRIM27-201ENST00000377194 CDK11AQ9UQ88 783 aaPredicted RBP24.26■■□□□ 1.47
TRIM27-201ENST00000377194 NUP160Q12769 1436 aa24.25■■□□□ 1.47
TRIM27-201ENST00000377194 DAPK1P53355 1430 aa24.23■■□□□ 1.47
TRIM27-201ENST00000377194 ABCC5O15440 1437 aa24.22■■□□□ 1.47
TRIM27-201ENST00000377194 KDM5BQ9UGL1 1544 aa24.21■■□□□ 1.47
TRIM27-201ENST00000377194 MPHOSPH9Q99550 1183 aa24.2■■□□□ 1.46
TRIM27-201ENST00000377194 TROQ12816 1431 aaPredicted RBP24.19■■□□□ 1.46
TRIM27-201ENST00000377194 CARMIL2Q6F5E8 1435 aa24.18■■□□□ 1.46
TRIM27-201ENST00000377194 FOXD1Q16676 465 aa24.17■■□□□ 1.46
TRIM27-201ENST00000377194 FKBP8Q14318 412 aa24.17■■□□□ 1.46
TRIM27-201ENST00000377194 DNMT1P26358 1616 aaKnown RBP24.16■■□□□ 1.46
TRIM27-201ENST00000377194 ROCK1Q13464 1354 aa24.15■■□□□ 1.46
TRIM27-201ENST00000377194 CFDP1Q9UEE9 299 aaPredicted RBP24.13■■□□□ 1.45
TRIM27-201ENST00000377194 KIF14Q15058 1648 aa24.11■■□□□ 1.45
TRIM27-201ENST00000377194 GPATCH8Q9UKJ3 1502 aaKnown RBP24.11■■□□□ 1.45
TRIM27-201ENST00000377194 RBM19Q9Y4C8 960 aaKnown RBP24.1■■□□□ 1.45
TRIM27-201ENST00000377194 ZNF777Q9ULD5 760 aaPredicted RBP24.08■■□□□ 1.45
TRIM27-201ENST00000377194 CAMSAP2Q08AD1 1489 aa24.08■■□□□ 1.44
TRIM27-201ENST00000377194 L3MBTL2Q969R5 705 aa24.05■■□□□ 1.44
TRIM27-201ENST00000377194 ABCA8O94911 1581 aa24.04■■□□□ 1.44
TRIM27-201ENST00000377194 ATP10BO94823 1461 aa24.03■■□□□ 1.44
TRIM27-201ENST00000377194 ADCY10Q96PN6 1610 aa24.03■■□□□ 1.44
TRIM27-201ENST00000377194 ANKRD30BQ9BXX2 1392 aa24.03■■□□□ 1.44
TRIM27-201ENST00000377194 PLEKHD1A6NEE1 506 aa24.02■■□□□ 1.44
TRIM27-201ENST00000377194 NCOA1Q15788 1441 aa24.01■■□□□ 1.43
TRIM27-201ENST00000377194 SLC4A1APQ9BWU0 796 aaKnown RBP24.01■■□□□ 1.43
TRIM27-201ENST00000377194 ITSN2Q9NZM3 1697 aa24■■□□□ 1.43
TRIM27-201ENST00000377194 HSPA5P11021 654 aaKnown RBP23.97■■□□□ 1.43
TRIM27-201ENST00000377194 ANP32CO43423 234 aa23.96■■□□□ 1.43
TRIM27-201ENST00000377194 ABCC10Q5T3U5 1492 aa23.95■■□□□ 1.42
TRIM27-201ENST00000377194 RPRD2Q5VT52 1461 aaKnown RBP23.95■■□□□ 1.42
TRIM27-201ENST00000377194 MSH5O43196 834 aa23.93■■□□□ 1.42
TRIM27-201ENST00000377194 PZPP20742 1482 aa23.93■■□□□ 1.42
TRIM27-201ENST00000377194 PTPRGP23470 1445 aa23.93■■□□□ 1.42
TRIM27-201ENST00000377194 CDC42BPAQ5VT25 1732 aa23.92■■□□□ 1.42
TRIM27-201ENST00000377194 WASHC2AQ641Q2 1341 aa23.91■■□□□ 1.42
TRIM27-201ENST00000377194 ADGRL2O95490 1459 aa23.91■■□□□ 1.42
TRIM27-201ENST00000377194 NBPF8Q3BBV2 869 aa23.91■■□□□ 1.42
TRIM27-201ENST00000377194 CCER2I3L3R5 266 aa23.91■■□□□ 1.42
TRIM27-201ENST00000377194 EIF4G2P78344 907 aaKnown RBP eCLIP23.89■■□□□ 1.42
TRIM27-201ENST00000377194 TEX14Q8IWB6 1497 aa23.89■■□□□ 1.41
TRIM27-201ENST00000377194 CROCC2H7BZ55 1655 aa23.89■■□□□ 1.41
TRIM27-201ENST00000377194 ADGBQ8N7X0 1667 aa23.89■■□□□ 1.41
TRIM27-201ENST00000377194 ANKRD30AQ9BXX3 1397 aa23.88■■□□□ 1.41
TRIM27-201ENST00000377194 NEFLP07196 543 aa23.88■■□□□ 1.41
TRIM27-201ENST00000377194 CHD1O14646 1710 aa23.85■■□□□ 1.41
TRIM27-201ENST00000377194 ANKRD50Q9ULJ7 1429 aa23.84■■□□□ 1.41
TRIM27-201ENST00000377194 C11orf95C9JLR9 678 aaPredicted RBP23.84■■□□□ 1.41
TRIM27-201ENST00000377194 HNRNPMP52272 730 aaKnown RBP eCLIP23.83■■□□□ 1.4
TRIM27-201ENST00000377194 PKD2Q13563 968 aa23.82■■□□□ 1.4
TRIM27-201ENST00000377194 C9orf84Q5VXU9 1444 aa23.81■■□□□ 1.4
TRIM27-201ENST00000377194 KIAA1107Q9UPP5 1409 aa23.79■■□□□ 1.4
TRIM27-201ENST00000377194 TSPY4P0CV99 314 aa23.78■■□□□ 1.4
TRIM27-201ENST00000377194 TSPY10P0CW01 314 aa23.78■■□□□ 1.4
TRIM27-201ENST00000377194 SHANK2Q9UPX8 1470 aa23.77■■□□□ 1.4
TRIM27-201ENST00000377194 MBD5Q9P267 1494 aa23.76■■□□□ 1.39
TRIM27-201ENST00000377194 ERCC6L2Q5T890 1561 aa23.75■■□□□ 1.39
TRIM27-201ENST00000377194 NUP155O75694 1391 aa23.75■■□□□ 1.39
TRIM27-201ENST00000377194 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
TRIM27-201ENST00000377194 SPATA31E1Q6ZUB1 1445 aa23.73■■□□□ 1.39
TRIM27-201ENST00000377194 CCDC7Q96M83 1385 aa23.71■■□□□ 1.39
TRIM27-201ENST00000377194 CDC42BPBQ9Y5S2 1711 aa23.71■■□□□ 1.39
TRIM27-201ENST00000377194 KIF15Q9NS87 1388 aa23.71■■□□□ 1.39
TRIM27-201ENST00000377194 SAMD9LQ8IVG5 1584 aa23.7■■□□□ 1.38
TRIM27-201ENST00000377194 ERICH6Q7L0X2 663 aa23.7■■□□□ 1.38
TRIM27-201ENST00000377194 PRKCSHP14314 528 aaPredicted RBP23.69■■□□□ 1.38
TRIM27-201ENST00000377194 ARHGEF5Q12774 1597 aa23.68■■□□□ 1.38
TRIM27-201ENST00000377194 CNTLNQ9NXG0 1405 aa23.67■■□□□ 1.38
TRIM27-201ENST00000377194 ZNF326Q5BKZ1 582 aaKnown RBP23.67■■□□□ 1.38
TRIM27-201ENST00000377194 PREX2Q70Z35 1606 aa23.66■■□□□ 1.38
TRIM27-201ENST00000377194 CCDC141Q6ZP82 1450 aa23.65■■□□□ 1.38
TRIM27-201ENST00000377194 KIF7Q2M1P5 1343 aa23.64■■□□□ 1.38
TRIM27-201ENST00000377194 TTC37Q6PGP7 1564 aa23.64■■□□□ 1.37
TRIM27-201ENST00000377194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.63■■□□□ 1.377e-11■■■■■ 38.2
TRIM27-201ENST00000377194 IRX6P78412 446 aaPredicted RBP23.62■■□□□ 1.37
TRIM27-201ENST00000377194 CCDC184Q52MB2 194 aa23.62■■□□□ 1.37
TRIM27-201ENST00000377194 KDM5DQ9BY66 1539 aa23.62■■□□□ 1.37
TRIM27-201ENST00000377194 ABCC2Q92887 1545 aa23.61■■□□□ 1.37
TRIM27-201ENST00000377194 RSPH4AQ5TD94 716 aa23.6■■□□□ 1.37
TRIM27-201ENST00000377194 SYCP2Q9BX26 1530 aa23.6■■□□□ 1.37
TRIM27-201ENST00000377194 PRKRIP1Q9H875 184 aaPredicted RBP23.58■■□□□ 1.37
TRIM27-201ENST00000377194 ARHGAP5Q13017 1502 aa23.58■■□□□ 1.37
TRIM27-201ENST00000377194 USP47Q96K76 1375 aa23.56■■□□□ 1.36
TRIM27-201ENST00000377194 FANCIQ9NVI1 1328 aa23.56■■□□□ 1.36
TRIM27-201ENST00000377194 HNRNPUQ00839 825 aaKnown RBP eCLIP23.55■■□□□ 1.36
TRIM27-201ENST00000377194 KDM2AQ9Y2K7 1162 aa23.53■■□□□ 1.36
TRIM27-201ENST00000377194 UHRF1BP1Q6BDS2 1440 aa23.52■■□□□ 1.36
TRIM27-201ENST00000377194 FAM135AQ9P2D6 1515 aa23.52■■□□□ 1.36
TRIM27-201ENST00000377194 CLASP1Q7Z460 1538 aa23.51■■□□□ 1.35
TRIM27-201ENST00000377194 POLR1AO95602 1720 aaPredicted RBP23.51■■□□□ 1.35
TRIM27-201ENST00000377194 BCORL1Q5H9F3 1711 aa23.51■■□□□ 1.35
TRIM27-201ENST00000377194 ARHGEF12Q9NZN5 1544 aa23.5■■□□□ 1.35
TRIM27-201ENST00000377194 DEKP35659 375 aaKnown RBP23.49■■□□□ 1.35
TRIM27-201ENST00000377194 DCAF11Q8TEB1 546 aa23.49■■□□□ 1.35
TRIM27-201ENST00000377194 MYO5CQ9NQX4 1742 aa23.48■■□□□ 1.35
TRIM27-201ENST00000377194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.48■■□□□ 1.354e-8■□□□□ 10.2
TRIM27-201ENST00000377194 KDM5CP41229 1560 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms