RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 NISCHQ9Y2I1 1504 aa36.2■■■■□ 3.38
TRIM27-201ENST00000377194 CCDC180Q9P1Z9 1646 aa30.88■■■□□ 2.53
TRIM27-201ENST00000377194 SHROOM4Q9ULL8 1493 aa30.59■■■□□ 2.49
TRIM27-201ENST00000377194 ZCCHC6Q5VYS8 1495 aaKnown RBP30.55■■■□□ 2.48
TRIM27-201ENST00000377194 DCAF8L2P0C7V8 631 aa30.06■■■□□ 2.4
TRIM27-201ENST00000377194 SUPT5HO00267 1087 aaKnown RBP29.86■■■□□ 2.37
TRIM27-201ENST00000377194 DCAF1Q9Y4B6 1507 aa29.7■■■□□ 2.35
TRIM27-201ENST00000377194 MYO15BQ96JP2 1530 aa28.97■■■□□ 2.23
TRIM27-201ENST00000377194 CHIC1Q5VXU3 224 aa28.92■■■□□ 2.22
TRIM27-201ENST00000377194 ABCC9O60706 1549 aa28.89■■■□□ 2.21
TRIM27-201ENST00000377194 SCRIBQ14160 1630 aa28.89■■■□□ 2.21
TRIM27-201ENST00000377194 NACADO15069 1562 aa28.65■■■□□ 2.18
TRIM27-201ENST00000377194 RSF1Q96T23 1441 aaPredicted RBP28.53■■■□□ 2.16
TRIM27-201ENST00000377194 HRCP23327 699 aa28.39■■■□□ 2.14
TRIM27-201ENST00000377194 CECR2Q9BXF3 1484 aa28.27■■■□□ 2.12
TRIM27-201ENST00000377194 RB1CC1Q8TDY2 1594 aa28.22■■■□□ 2.11
TRIM27-201ENST00000377194 MROH2BQ7Z745 1585 aa28.13■■■□□ 2.09
TRIM27-201ENST00000377194 LOC105371045A0A1W2PR82 267 aa28.05■■■□□ 2.08
TRIM27-201ENST00000377194 PPARGC1BQ86YN6 1023 aaKnown RBP28.02■■■□□ 2.08
TRIM27-201ENST00000377194 WIZO95785 1651 aa27.94■■■□□ 2.06
TRIM27-201ENST00000377194 PCGF6Q9BYE7 350 aa27.92■■■□□ 2.06
TRIM27-201ENST00000377194 TRIM41Q8WV44 630 aa27.84■■■□□ 2.05
TRIM27-201ENST00000377194 UNC13AQ9UPW8 1703 aa27.82■■■□□ 2.04
TRIM27-201ENST00000377194 BAZ1AQ9NRL2 1556 aaPredicted RBP27.8■■■□□ 2.04
TRIM27-201ENST00000377194 SMARCA4P51532 1647 aa27.61■■■□□ 2.01
TRIM27-201ENST00000377194 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.01
TRIM27-201ENST00000377194 FAM9AQ8IZU1 332 aaPredicted RBP27.59■■■□□ 2.01
TRIM27-201ENST00000377194 BICRAQ9NZM4 1560 aa27.52■■■□□ 2
TRIM27-201ENST00000377194 TOP2AP11388 1531 aaKnown RBP27.49■■□□□ 1.99
TRIM27-201ENST00000377194 EIF4G1Q04637 1599 aaKnown RBP27.43■■□□□ 1.98
TRIM27-201ENST00000377194 CCDC88BA6NC98 1476 aa27.39■■□□□ 1.98
TRIM27-201ENST00000377194 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
TRIM27-201ENST00000377194 EHMT2Q96KQ7 1210 aa27.34■■□□□ 1.97
TRIM27-201ENST00000377194 PELP1Q8IZL8 1130 aaKnown RBP27.28■■□□□ 1.96
TRIM27-201ENST00000377194 ABCC8Q09428 1581 aa27.2■■□□□ 1.95
TRIM27-201ENST00000377194 TRIM26Q12899 539 aaPredicted RBP27.2■■□□□ 1.95
TRIM27-201ENST00000377194 PEG3Q9GZU2 1588 aa27.12■■□□□ 1.93
TRIM27-201ENST00000377194 ATAD2BQ9ULI0 1458 aa27.01■■□□□ 1.91
TRIM27-201ENST00000377194 SCAF1Q9H7N4 1312 aaKnown RBP26.98■■□□□ 1.91
TRIM27-201ENST00000377194 SOGA1O94964 1423 aa26.91■■□□□ 1.9
TRIM27-201ENST00000377194 BAZ1BQ9UIG0 1483 aaKnown RBP26.88■■□□□ 1.89
TRIM27-201ENST00000377194 RUSC2Q8N2Y8 1516 aa26.8■■□□□ 1.88
TRIM27-201ENST00000377194 WRNQ14191 1432 aaPredicted RBP eCLIP26.79■■□□□ 1.88
TRIM27-201ENST00000377194 CSRNP3Q8WYN3 585 aa26.72■■□□□ 1.87
TRIM27-201ENST00000377194 ZEB1P37275 1124 aaPredicted RBP26.68■■□□□ 1.86
TRIM27-201ENST00000377194 SYNJ1O43426 1573 aa26.67■■□□□ 1.86
TRIM27-201ENST00000377194 EEA1Q15075 1411 aa26.67■■□□□ 1.86
TRIM27-201ENST00000377194 CEP162Q5TB80 1403 aa26.6■■□□□ 1.85
TRIM27-201ENST00000377194 TNIKQ9UKE5 1360 aa26.6■■□□□ 1.85
TRIM27-201ENST00000377194 UBTFP17480 764 aaKnown RBP26.55■■□□□ 1.84
TRIM27-201ENST00000377194 NCAPD3P42695 1498 aa26.55■■□□□ 1.84
TRIM27-201ENST00000377194 HMGXB3Q12766 1538 aa26.48■■□□□ 1.83
TRIM27-201ENST00000377194 GOLGA3Q08378 1498 aa26.47■■□□□ 1.83
TRIM27-201ENST00000377194 TTBK1Q5TCY1 1321 aaPredicted RBP26.37■■□□□ 1.81
TRIM27-201ENST00000377194 TOP2BQ02880 1626 aa26.36■■□□□ 1.81
TRIM27-201ENST00000377194 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
TRIM27-201ENST00000377194 KIF21BO75037 1637 aa26.32■■□□□ 1.8
TRIM27-201ENST00000377194 BIVM-ERCC5R4GMW8 1640 aa26.26■■□□□ 1.79
TRIM27-201ENST00000377194 RAPGEF2Q9Y4G8 1499 aa26.26■■□□□ 1.79
TRIM27-201ENST00000377194 CFTRP13569 1480 aa26.24■■□□□ 1.79
TRIM27-201ENST00000377194 NEUROD1Q13562 356 aa26.23■■□□□ 1.79
TRIM27-201ENST00000377194 ACIN1Q9UKV3 1341 aaKnown RBP26.22■■□□□ 1.79
TRIM27-201ENST00000377194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.2■■□□□ 1.78
TRIM27-201ENST00000377194 CUX1P39880 1505 aa26.2■■□□□ 1.78
TRIM27-201ENST00000377194 CLIP1P30622 1438 aa26.17■■□□□ 1.78
TRIM27-201ENST00000377194 MYT1Q01538 1121 aa26.14■■□□□ 1.77
TRIM27-201ENST00000377194 RANGAP1P46060 587 aaPredicted RBP26.1■■□□□ 1.77
TRIM27-201ENST00000377194 GTF3C3Q9Y5Q9 886 aa26.09■■□□□ 1.77
TRIM27-201ENST00000377194 CCER1Q8TC90 406 aaPredicted RBP26.07■■□□□ 1.76
TRIM27-201ENST00000377194 PRXQ9BXM0 1461 aa26.05■■□□□ 1.76
TRIM27-201ENST00000377194 VPS8Q8N3P4 1428 aa26.02■■□□□ 1.76
TRIM27-201ENST00000377194 CC2D2AQ9P2K1 1620 aa26.02■■□□□ 1.76
TRIM27-201ENST00000377194 CADPSQ9ULU8 1353 aa26.01■■□□□ 1.75
TRIM27-201ENST00000377194 KIF27Q86VH2 1401 aa25.98■■□□□ 1.75
TRIM27-201ENST00000377194 ERICH3Q5RHP9 1530 aa25.97■■□□□ 1.75
TRIM27-201ENST00000377194 PRDM2Q13029 1718 aa25.94■■□□□ 1.74
TRIM27-201ENST00000377194 APLP2Q06481 763 aa25.84■■□□□ 1.73
TRIM27-201ENST00000377194 CENPBP07199 599 aaPredicted RBP25.83■■□□□ 1.73
TRIM27-201ENST00000377194 ARAP1Q96P48 1450 aa25.8■■□□□ 1.72
TRIM27-201ENST00000377194 CUX2O14529 1486 aa25.8■■□□□ 1.72
TRIM27-201ENST00000377194 DIEXFQ68CQ4 756 aaKnown RBP25.78■■□□□ 1.72
TRIM27-201ENST00000377194 IGF1RP08069 1367 aa25.78■■□□□ 1.72
TRIM27-201ENST00000377194 HNRNPUL2Q1KMD3 747 aaKnown RBP25.77■■□□□ 1.72
TRIM27-201ENST00000377194 FGD5Q6ZNL6 1462 aa25.77■■□□□ 1.72
TRIM27-201ENST00000377194 FANCD2Q9BXW9 1451 aa25.73■■□□□ 1.71
TRIM27-201ENST00000377194 NESP48681 1621 aa25.68■■□□□ 1.7
TRIM27-201ENST00000377194 KANK4Q5T7N3 995 aaPredicted RBP25.66■■□□□ 1.7
TRIM27-201ENST00000377194 ARHGAP35Q9NRY4 1499 aa25.65■■□□□ 1.7
TRIM27-201ENST00000377194 CARMIL1Q5VZK9 1371 aa25.63■■□□□ 1.69
TRIM27-201ENST00000377194 RAD54L2Q9Y4B4 1467 aa25.57■■□□□ 1.68
TRIM27-201ENST00000377194 DNAJC5BQ9UF47 199 aa25.55■■□□□ 1.68
TRIM27-201ENST00000377194 DNMBPQ6XZF7 1577 aa25.54■■□□□ 1.68
TRIM27-201ENST00000377194 YTHDC1Q96MU7 727 aaKnown RBP25.54■■□□□ 1.68
TRIM27-201ENST00000377194 TOPBP1Q92547 1522 aa25.54■■□□□ 1.68
TRIM27-201ENST00000377194 POLA1P09884 1462 aaPredicted RBP25.52■■□□□ 1.68
TRIM27-201ENST00000377194 ABCA10Q8WWZ4 1543 aa25.47■■□□□ 1.67
TRIM27-201ENST00000377194 LAMC3Q9Y6N6 1575 aa25.41■■□□□ 1.66
TRIM27-201ENST00000377194 URB2Q14146 1524 aaKnown RBP25.4■■□□□ 1.66
TRIM27-201ENST00000377194 RRBP1Q9P2E9 1410 aaKnown RBP25.38■■□□□ 1.65
TRIM27-201ENST00000377194 P3H3Q8IVL6 736 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms