RNA–Protein interactions for RNA: ENST00000377190.7

SYVN1-203, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 3,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-203ENST00000377190 PBRM1Q86U86 1689 aa23.73■■□□□ 1.39
SYVN1-203ENST00000377190 ARHGEF11O15085 1522 aa23.72■■□□□ 1.39
SYVN1-203ENST00000377190 MRC2Q9UBG0 1479 aa23.72■■□□□ 1.39
SYVN1-203ENST00000377190 CDK11AQ9UQ88 783 aaPredicted RBP23.71■■□□□ 1.39
SYVN1-203ENST00000377190 PRG4Q92954 1404 aaPredicted RBP23.71■■□□□ 1.39
SYVN1-203ENST00000377190 ADAMTS12P58397 1594 aa23.7■■□□□ 1.38
SYVN1-203ENST00000377190 MRS2Q9HD23 443 aa23.7■■□□□ 1.38
SYVN1-203ENST00000377190 TCOF1Q13428 1488 aaKnown RBP23.68■■□□□ 1.38
SYVN1-203ENST00000377190 WDR62O43379 1518 aa23.68■■□□□ 1.38
SYVN1-203ENST00000377190 DAPK1P53355 1430 aa23.68■■□□□ 1.38
SYVN1-203ENST00000377190 ABCC5O15440 1437 aa23.67■■□□□ 1.38
SYVN1-203ENST00000377190 MIA2Q96PC5 1412 aa23.65■■□□□ 1.38
SYVN1-203ENST00000377190 NUP153P49790 1475 aaKnown RBP23.63■■□□□ 1.37
SYVN1-203ENST00000377190 PLB1Q6P1J6 1458 aa23.62■■□□□ 1.37
SYVN1-203ENST00000377190 KDM2AQ9Y2K7 1162 aa23.62■■□□□ 1.37
SYVN1-203ENST00000377190 ANKRD30BQ9BXX2 1392 aa23.61■■□□□ 1.37
SYVN1-203ENST00000377190 DISP1Q96F81 1524 aa23.61■■□□□ 1.37
SYVN1-203ENST00000377190 PKD2Q13563 968 aa23.61■■□□□ 1.37
SYVN1-203ENST00000377190 PRKRIP1Q9H875 184 aaPredicted RBP23.61■■□□□ 1.37
SYVN1-203ENST00000377190 RBM19Q9Y4C8 960 aaKnown RBP23.61■■□□□ 1.37
SYVN1-203ENST00000377190 CCDC7Q96M83 1385 aa23.6■■□□□ 1.37
SYVN1-203ENST00000377190 KIF7Q2M1P5 1343 aa23.59■■□□□ 1.37
SYVN1-203ENST00000377190 ERCC6Q03468 1493 aa23.59■■□□□ 1.37
SYVN1-203ENST00000377190 MYT1Q01538 1121 aa23.58■■□□□ 1.37
SYVN1-203ENST00000377190 KIAA0586Q9BVV6 1533 aa23.57■■□□□ 1.36
SYVN1-203ENST00000377190 GCC2Q8IWJ2 1684 aa23.57■■□□□ 1.36
SYVN1-203ENST00000377190 JPH4Q96JJ6 628 aa23.56■■□□□ 1.36
SYVN1-203ENST00000377190 CNTLNQ9NXG0 1405 aa23.56■■□□□ 1.36
SYVN1-203ENST00000377190 IFT140Q96RY7 1462 aa23.55■■□□□ 1.36
SYVN1-203ENST00000377190 GRIN2AQ12879 1464 aa23.54■■□□□ 1.36
SYVN1-203ENST00000377190 KIAA0556O60303 1618 aa23.53■■□□□ 1.36
SYVN1-203ENST00000377190 AKNAQ7Z591 1439 aa23.51■■□□□ 1.35
SYVN1-203ENST00000377190 RPRD2Q5VT52 1461 aaKnown RBP23.5■■□□□ 1.35
SYVN1-203ENST00000377190 PLEKHD1A6NEE1 506 aa23.5■■□□□ 1.35
SYVN1-203ENST00000377190 HNRNPMP52272 730 aaKnown RBP eCLIP23.49■■□□□ 1.35
SYVN1-203ENST00000377190 NCOA1Q15788 1441 aa23.48■■□□□ 1.35
SYVN1-203ENST00000377190 ROCK1Q13464 1354 aa23.47■■□□□ 1.35
SYVN1-203ENST00000377190 B4GALNT3Q6L9W6 998 aa23.47■■□□□ 1.35
SYVN1-203ENST00000377190 CAMSAP2Q08AD1 1489 aa23.47■■□□□ 1.35
SYVN1-203ENST00000377190 RAPGEF6Q8TEU7 1601 aa23.46■■□□□ 1.35
SYVN1-203ENST00000377190 TROQ12816 1431 aaPredicted RBP23.46■■□□□ 1.35
SYVN1-203ENST00000377190 ANP32EQ9BTT0 268 aa23.46■■□□□ 1.35
SYVN1-203ENST00000377190 NUP155O75694 1391 aa23.44■■□□□ 1.34
SYVN1-203ENST00000377190 TEX14Q8IWB6 1497 aa23.44■■□□□ 1.34
SYVN1-203ENST00000377190 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
SYVN1-203ENST00000377190 GPATCH8Q9UKJ3 1502 aaKnown RBP23.42■■□□□ 1.34
SYVN1-203ENST00000377190 DNMT1P26358 1616 aaKnown RBP23.42■■□□□ 1.34
SYVN1-203ENST00000377190 KIF14Q15058 1648 aa23.42■■□□□ 1.34
SYVN1-203ENST00000377190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.41■■□□□ 1.346e-6■□□□□ 11.2
SYVN1-203ENST00000377190 PZPP20742 1482 aa23.41■■□□□ 1.34
SYVN1-203ENST00000377190 RGL3Q3MIN7 710 aa23.41■■□□□ 1.34
SYVN1-203ENST00000377190 USP47Q96K76 1375 aa23.41■■□□□ 1.34
SYVN1-203ENST00000377190 TSPY4P0CV99 314 aa23.41■■□□□ 1.34
SYVN1-203ENST00000377190 TSPY10P0CW01 314 aa23.41■■□□□ 1.34
SYVN1-203ENST00000377190 CARD11Q9BXL7 1154 aa23.41■■□□□ 1.34
SYVN1-203ENST00000377190 DCAF11Q8TEB1 546 aa23.4■■□□□ 1.34
SYVN1-203ENST00000377190 SALL2Q9Y467 1007 aaPredicted RBP23.4■■□□□ 1.34
SYVN1-203ENST00000377190 ANKRD30AQ9BXX3 1397 aa23.38■■□□□ 1.33
SYVN1-203ENST00000377190 ANKRD50Q9ULJ7 1429 aa23.37■■□□□ 1.33
SYVN1-203ENST00000377190 CEP170Q5SW79 1584 aa23.36■■□□□ 1.33
SYVN1-203ENST00000377190 CARMIL2Q6F5E8 1435 aa23.35■■□□□ 1.33
SYVN1-203ENST00000377190 SPATA31E1Q6ZUB1 1445 aa23.34■■□□□ 1.33
SYVN1-203ENST00000377190 KIAA1107Q9UPP5 1409 aa23.34■■□□□ 1.33
SYVN1-203ENST00000377190 ST20-MTHFSA0A0A6YYL1 179 aa23.34■■□□□ 1.33
SYVN1-203ENST00000377190 TMC1Q8TDI8 760 aa23.3■■□□□ 1.32
SYVN1-203ENST00000377190 ZBED9Q6R2W3 1325 aa23.3■■□□□ 1.32
SYVN1-203ENST00000377190 SYNJ2O15056 1496 aa23.3■■□□□ 1.32
SYVN1-203ENST00000377190 PPP4R2Q9NY27 417 aa23.29■■□□□ 1.32
SYVN1-203ENST00000377190 MSH5O43196 834 aa23.28■■□□□ 1.32
SYVN1-203ENST00000377190 C9orf84Q5VXU9 1444 aa23.26■■□□□ 1.31
SYVN1-203ENST00000377190 ATP10BO94823 1461 aa23.24■■□□□ 1.31
SYVN1-203ENST00000377190 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
SYVN1-203ENST00000377190 KIF15Q9NS87 1388 aa23.24■■□□□ 1.31
SYVN1-203ENST00000377190 DHX29Q7Z478 1369 aaKnown RBP23.23■■□□□ 1.31
SYVN1-203ENST00000377190 NBPF1Q3BBV0 1214 aa23.2■■□□□ 1.3
SYVN1-203ENST00000377190 BCORL1Q5H9F3 1711 aa23.19■■□□□ 1.3
SYVN1-203ENST00000377190 ERICH6Q7L0X2 663 aa23.18■■□□□ 1.3
SYVN1-203ENST00000377190 PTPRGP23470 1445 aa23.18■■□□□ 1.3
SYVN1-203ENST00000377190 ROCK2O75116 1388 aaKnown RBP23.17■■□□□ 1.3
SYVN1-203ENST00000377190 ITSN2Q9NZM3 1697 aa23.15■■□□□ 1.3
SYVN1-203ENST00000377190 PNISRQ8TF01 805 aaKnown RBP23.13■■□□□ 1.29
SYVN1-203ENST00000377190 NUP160Q12769 1436 aa23.13■■□□□ 1.29
SYVN1-203ENST00000377190 CC2D1BQ5T0F9 858 aaKnown RBP23.13■■□□□ 1.29
SYVN1-203ENST00000377190 MBD5Q9P267 1494 aa23.12■■□□□ 1.29
SYVN1-203ENST00000377190 ADGRL2O95490 1459 aa23.12■■□□□ 1.29
SYVN1-203ENST00000377190 NUDCQ9Y266 331 aa23.12■■□□□ 1.29
SYVN1-203ENST00000377190 CCDC136Q96JN2 1154 aa23.11■■□□□ 1.29
SYVN1-203ENST00000377190 ADGBQ8N7X0 1667 aa23.09■■□□□ 1.29
SYVN1-203ENST00000377190 ABCC10Q5T3U5 1492 aa23.09■■□□□ 1.29
SYVN1-203ENST00000377190 CDC42BPAQ5VT25 1732 aa23.08■■□□□ 1.28
SYVN1-203ENST00000377190 KDM5CP41229 1560 aa23.04■■□□□ 1.28
SYVN1-203ENST00000377190 ABCA8O94911 1581 aa23.03■■□□□ 1.28
SYVN1-203ENST00000377190 CCDC144AA2RUR9 1427 aa23.02■■□□□ 1.28
SYVN1-203ENST00000377190 CROCC2H7BZ55 1655 aa23.02■■□□□ 1.28
SYVN1-203ENST00000377190 ERICH6BQ5W0A0 696 aa23.02■■□□□ 1.28
SYVN1-203ENST00000377190 MYT1LQ9UL68 1186 aa23.01■■□□□ 1.27
SYVN1-203ENST00000377190 RALGAPBQ86X10 1494 aa23.01■■□□□ 1.27
SYVN1-203ENST00000377190 ADCY10Q96PN6 1610 aa22.99■■□□□ 1.27
SYVN1-203ENST00000377190 SMG6Q86US8 1419 aaKnown RBP22.99■■□□□ 1.27
SYVN1-203ENST00000377190 MYBBP1AQ9BQG0 1328 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms