RNA–Protein interactions for RNA: ENST00000377067.8

GPC5-201, Transcript of glypican 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC5, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-201ENST00000377067 TCERG1O14776 1098 aaKnown RBP25.55■■□□□ 1.68
GPC5-201ENST00000377067 BACH2Q9BYV9 841 aa25.53■■□□□ 1.68
GPC5-201ENST00000377067 MPHOSPH9Q99550 1183 aa25.51■■□□□ 1.67
GPC5-201ENST00000377067 GSE1Q14687 1217 aa25.5■■□□□ 1.67
GPC5-201ENST00000377067 CFTRP13569 1480 aa25.5■■□□□ 1.67
GPC5-201ENST00000377067 MYOM3Q5VTT5 1437 aa25.48■■□□□ 1.67
GPC5-201ENST00000377067 RRP1P56182 461 aaKnown RBP25.47■■□□□ 1.67
GPC5-201ENST00000377067 SKAP1Q86WV1 359 aa25.47■■□□□ 1.67
GPC5-201ENST00000377067 DHX29Q7Z478 1369 aaKnown RBP25.46■■□□□ 1.67
GPC5-201ENST00000377067 SLC4A3P48751 1232 aa25.44■■□□□ 1.66
GPC5-201ENST00000377067 PNISRQ8TF01 805 aaKnown RBP25.43■■□□□ 1.66
GPC5-201ENST00000377067 FRAT1Q92837 279 aaPredicted RBP25.43■■□□□ 1.66
GPC5-201ENST00000377067 NFKBIBQ15653 356 aa25.43■■□□□ 1.66
GPC5-201ENST00000377067 SPATA31E1Q6ZUB1 1445 aa25.42■■□□□ 1.66
GPC5-201ENST00000377067 TMC1Q8TDI8 760 aa25.42■■□□□ 1.66
GPC5-201ENST00000377067 KDM6BO15054 1643 aa25.42■■□□□ 1.66
GPC5-201ENST00000377067 HECW1Q76N89 1606 aa25.39■■□□□ 1.65
GPC5-201ENST00000377067 MS4A1P11836 297 aa25.38■■□□□ 1.65
GPC5-201ENST00000377067 EFCAB5A4FU69 1503 aa25.38■■□□□ 1.65
GPC5-201ENST00000377067 SNAPC4Q5SXM2 1469 aa25.37■■□□□ 1.65
GPC5-201ENST00000377067 RCAN3Q9UKA8 241 aa25.36■■□□□ 1.65
GPC5-201ENST00000377067 ABCA5Q8WWZ7 1642 aa25.35■■□□□ 1.65
GPC5-201ENST00000377067 DDRGK1Q96HY6 314 aa25.33■■□□□ 1.65
GPC5-201ENST00000377067 ZNF326Q5BKZ1 582 aaKnown RBP25.32■■□□□ 1.64
GPC5-201ENST00000377067 TEX14Q8IWB6 1497 aa25.3■■□□□ 1.64
GPC5-201ENST00000377067 HMGXB3Q12766 1538 aa25.29■■□□□ 1.64
GPC5-201ENST00000377067 ANKRD30BQ9BXX2 1392 aa25.29■■□□□ 1.64
GPC5-201ENST00000377067 RPRD2Q5VT52 1461 aaKnown RBP25.28■■□□□ 1.64
GPC5-201ENST00000377067 PLIN1O60240 522 aa25.28■■□□□ 1.64
GPC5-201ENST00000377067 GCC2Q8IWJ2 1684 aa25.26■■□□□ 1.63
GPC5-201ENST00000377067 POLR1AO95602 1720 aaPredicted RBP25.25■■□□□ 1.63
GPC5-201ENST00000377067 DAXXQ9UER7 740 aaPredicted RBP25.25■■□□□ 1.63
GPC5-201ENST00000377067 SUPT6HQ7KZ85 1726 aaKnown RBP25.25■■□□□ 1.63
GPC5-201ENST00000377067 LRRIQ1Q96JM4 1722 aa25.24■■□□□ 1.63
GPC5-201ENST00000377067 USP47Q96K76 1375 aa25.23■■□□□ 1.63
GPC5-201ENST00000377067 BCORL1Q5H9F3 1711 aa25.21■■□□□ 1.63
GPC5-201ENST00000377067 SLC4A1APQ9BWU0 796 aaKnown RBP25.21■■□□□ 1.63
GPC5-201ENST00000377067 FRAT2O75474 233 aaPredicted RBP25.2■■□□□ 1.63
GPC5-201ENST00000377067 CDCA7LQ96GN5 454 aa25.2■■□□□ 1.63
GPC5-201ENST00000377067 UGGT2Q9NYU1 1516 aa25.2■■□□□ 1.63
GPC5-201ENST00000377067 LRPPRCP42704 1394 aaKnown RBP25.2■■□□□ 1.62
GPC5-201ENST00000377067 MIA2Q96PC5 1412 aa25.2■■□□□ 1.62
GPC5-201ENST00000377067 DCAF11Q8TEB1 546 aa25.2■■□□□ 1.62
GPC5-201ENST00000377067 CRBNQ96SW2 442 aa25.19■■□□□ 1.62
GPC5-201ENST00000377067 EHBP1L1Q8N3D4 1523 aa25.19■■□□□ 1.62
GPC5-201ENST00000377067 RAD54L2Q9Y4B4 1467 aa25.18■■□□□ 1.62
GPC5-201ENST00000377067 RSPH6AQ9H0K4 717 aa25.17■■□□□ 1.62
GPC5-201ENST00000377067 MAGI3Q5TCQ9 1506 aa25.17■■□□□ 1.62
GPC5-201ENST00000377067 GRIN2BQ13224 1484 aa25.17■■□□□ 1.62
GPC5-201ENST00000377067 CC2D2AQ9P2K1 1620 aa25.15■■□□□ 1.62
GPC5-201ENST00000377067 TCOF1Q13428 1488 aaKnown RBP25.14■■□□□ 1.62
GPC5-201ENST00000377067 FAM43AQ8N2R8 423 aa25.14■■□□□ 1.62
GPC5-201ENST00000377067 ARID3CA6NKF2 412 aa25.12■■□□□ 1.61
GPC5-201ENST00000377067 CTTNBP2Q8WZ74 1663 aa25.12■■□□□ 1.61
GPC5-201ENST00000377067 MYBBP1AQ9BQG0 1328 aaKnown RBP25.12■■□□□ 1.61
GPC5-201ENST00000377067 BRD4O60885 1362 aaPredicted RBP25.1■■□□□ 1.61
GPC5-201ENST00000377067 KIF15Q9NS87 1388 aa25.1■■□□□ 1.61
GPC5-201ENST00000377067 ARHGEF11O15085 1522 aa25.1■■□□□ 1.61
GPC5-201ENST00000377067 CADPSQ9ULU8 1353 aa25.07■■□□□ 1.6
GPC5-201ENST00000377067 C20orf194Q5TEA3 1177 aa25.06■■□□□ 1.6
GPC5-201ENST00000377067 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
GPC5-201ENST00000377067 PDE3BQ13370 1112 aa25.05■■□□□ 1.6
GPC5-201ENST00000377067 ARID4BQ4LE39 1312 aaPredicted RBP25.02■■□□□ 1.6
GPC5-201ENST00000377067 RALBP1Q15311 655 aa25.02■■□□□ 1.6
GPC5-201ENST00000377067 ROCK2O75116 1388 aaKnown RBP25.02■■□□□ 1.6
GPC5-201ENST00000377067 PKNOX2Q96KN3 472 aa25.02■■□□□ 1.6
GPC5-201ENST00000377067 C8orf34Q49A92 452 aa25.01■■□□□ 1.59
GPC5-201ENST00000377067 FAM161AQ3B820 660 aa25■■□□□ 1.59
GPC5-201ENST00000377067 DNAJC5BQ9UF47 199 aa25■■□□□ 1.59
GPC5-201ENST00000377067 CARD11Q9BXL7 1154 aa24.99■■□□□ 1.59
GPC5-201ENST00000377067 SAMD9Q5K651 1589 aa24.99■■□□□ 1.59
GPC5-201ENST00000377067 RRAGDQ9NQL2 400 aaPredicted RBP24.99■■□□□ 1.59
GPC5-201ENST00000377067 ABCA10Q8WWZ4 1543 aa24.98■■□□□ 1.59
GPC5-201ENST00000377067 POGKQ9P215 609 aa24.98■■□□□ 1.59
GPC5-201ENST00000377067 KDM5CP41229 1560 aa24.98■■□□□ 1.59
GPC5-201ENST00000377067 THOC2Q8NI27 1593 aaKnown RBP24.98■■□□□ 1.59
GPC5-201ENST00000377067 MBD5Q9P267 1494 aa24.97■■□□□ 1.59
GPC5-201ENST00000377067 KDM2BQ8NHM5 1336 aa24.97■■□□□ 1.59
GPC5-201ENST00000377067 ST20-MTHFSA0A0A6YYL1 179 aa24.97■■□□□ 1.59
GPC5-201ENST00000377067 RGS3P49796 1198 aa24.97■■□□□ 1.59
GPC5-201ENST00000377067 ZNF644Q9H582 1327 aaPredicted RBP24.96■■□□□ 1.59
GPC5-201ENST00000377067 NLRP13Q86W25 1043 aa24.96■■□□□ 1.59
GPC5-201ENST00000377067 CUL7Q14999 1698 aa24.95■■□□□ 1.58
GPC5-201ENST00000377067 KTN1Q86UP2 1357 aaKnown RBP24.95■■□□□ 1.58
GPC5-201ENST00000377067 DAPK1P53355 1430 aa24.94■■□□□ 1.58
GPC5-201ENST00000377067 POLA1P09884 1462 aaPredicted RBP24.93■■□□□ 1.58
GPC5-201ENST00000377067 CENPQQ7L2Z9 268 aaPredicted RBP24.91■■□□□ 1.58
GPC5-201ENST00000377067 ARXQ96QS3 562 aa24.9■■□□□ 1.58
GPC5-201ENST00000377067 KDM2AQ9Y2K7 1162 aa24.9■■□□□ 1.58
GPC5-201ENST00000377067 PZPP20742 1482 aa24.9■■□□□ 1.58
GPC5-201ENST00000377067 ABCC5O15440 1437 aa24.9■■□□□ 1.58
GPC5-201ENST00000377067 ROCK1Q13464 1354 aa24.9■■□□□ 1.58
GPC5-201ENST00000377067 CDK13Q14004 1512 aaKnown RBP24.89■■□□□ 1.57
GPC5-201ENST00000377067 PKD2Q13563 968 aa24.88■■□□□ 1.57
GPC5-201ENST00000377067 KIF14Q15058 1648 aa24.88■■□□□ 1.57
GPC5-201ENST00000377067 FANCD2Q9BXW9 1451 aa24.88■■□□□ 1.57
GPC5-201ENST00000377067 CC2D1BQ5T0F9 858 aaKnown RBP24.84■■□□□ 1.57
GPC5-201ENST00000377067 EPRSP07814 1512 aaKnown RBP24.84■■□□□ 1.57
GPC5-201ENST00000377067 VSIG10Q8N0Z9 540 aa24.83■■□□□ 1.56
GPC5-201ENST00000377067 TDRD9Q8NDG6 1382 aaKnown RBP24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms