RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 KDM6BO15054 1643 aa31.23■■■□□ 2.59
DDR1-228ENST00000376575 CFAP74Q9C0B2 1584 aa31.22■■■□□ 2.59
DDR1-228ENST00000376575 NCOA2Q15596 1464 aa31.22■■■□□ 2.59
DDR1-228ENST00000376575 AKNAQ7Z591 1439 aa31.2■■■□□ 2.59
DDR1-228ENST00000376575 EFCAB2Q5VUJ9 269 aa31.19■■■□□ 2.58
DDR1-228ENST00000376575 CCNB3Q8WWL7 1395 aa31.17■■■□□ 2.58
DDR1-228ENST00000376575 ARHGAP5Q13017 1502 aa31.16■■■□□ 2.58
DDR1-228ENST00000376575 ITSN2Q9NZM3 1697 aa31.1■■■□□ 2.57
DDR1-228ENST00000376575 ADGRL1O94910 1474 aa31.08■■■□□ 2.57
DDR1-228ENST00000376575 CFDP1Q9UEE9 299 aaPredicted RBP31.07■■■□□ 2.56
DDR1-228ENST00000376575 DENND4BO75064 1496 aaPredicted RBP31.05■■■□□ 2.56
DDR1-228ENST00000376575 SCAPERQ9BY12 1400 aa31.05■■■□□ 2.56
DDR1-228ENST00000376575 FRMPD1Q5SYB0 1578 aa31.05■■■□□ 2.56
DDR1-228ENST00000376575 SAMD9LQ8IVG5 1584 aa31.05■■■□□ 2.56
DDR1-228ENST00000376575 RICTORQ6R327 1708 aa31.04■■■□□ 2.56
DDR1-228ENST00000376575 ABCC1P33527 1531 aa31.03■■■□□ 2.56
DDR1-228ENST00000376575 RAPGEF3O95398 923 aa31.02■■■□□ 2.56
DDR1-228ENST00000376575 MYOM3Q5VTT5 1437 aa31.01■■■□□ 2.55
DDR1-228ENST00000376575 ARHGEF12Q9NZN5 1544 aa31.01■■■□□ 2.55
DDR1-228ENST00000376575 KIAA1107Q9UPP5 1409 aa31■■■□□ 2.55
DDR1-228ENST00000376575 POGZQ7Z3K3 1410 aa30.99■■■□□ 2.55
DDR1-228ENST00000376575 MIA2Q96PC5 1412 aa30.98■■■□□ 2.55
DDR1-228ENST00000376575 PLEKHH2Q8IVE3 1493 aa30.96■■■□□ 2.55
DDR1-228ENST00000376575 ZMYM4Q5VZL5 1548 aa30.94■■■□□ 2.54
DDR1-228ENST00000376575 ZNF777Q9ULD5 760 aaPredicted RBP30.94■■■□□ 2.54
DDR1-228ENST00000376575 ZNF644Q9H582 1327 aaPredicted RBP30.94■■■□□ 2.54
DDR1-228ENST00000376575 ZNF518AQ6AHZ1 1483 aa30.93■■■□□ 2.54
DDR1-228ENST00000376575 KDM5CP41229 1560 aa30.92■■■□□ 2.54
DDR1-228ENST00000376575 SYCP2Q9BX26 1530 aa30.92■■■□□ 2.54
DDR1-228ENST00000376575 TRAPPC8Q9Y2L5 1435 aa30.91■■■□□ 2.54
DDR1-228ENST00000376575 MBD5Q9P267 1494 aa30.91■■■□□ 2.54
DDR1-228ENST00000376575 CAMSAP2Q08AD1 1489 aa30.89■■■□□ 2.54
DDR1-228ENST00000376575 AFAP1Q8N556 730 aa30.88■■■□□ 2.53
DDR1-228ENST00000376575 HNRNPMP52272 730 aaKnown RBP eCLIP30.87■■■□□ 2.53
DDR1-228ENST00000376575 MAGI2Q86UL8 1455 aa30.87■■■□□ 2.53
DDR1-228ENST00000376575 FGD6Q6ZV73 1430 aa30.86■■■□□ 2.53
DDR1-228ENST00000376575 TCOF1Q13428 1488 aaKnown RBP30.82■■■□□ 2.53
DDR1-228ENST00000376575 MLH3Q9UHC1 1453 aa30.82■■■□□ 2.53
DDR1-228ENST00000376575 PPARGC1BQ86YN6 1023 aaKnown RBP30.82■■■□□ 2.52
DDR1-228ENST00000376575 PTPN23Q9H3S7 1636 aa30.81■■■□□ 2.52
DDR1-228ENST00000376575 ARHGEF5Q12774 1597 aa30.8■■■□□ 2.52
DDR1-228ENST00000376575 RSPH4AQ5TD94 716 aa30.79■■■□□ 2.52
DDR1-228ENST00000376575 ARHGEF40Q8TER5 1519 aa30.78■■■□□ 2.52
DDR1-228ENST00000376575 HECW2Q9P2P5 1572 aa30.77■■■□□ 2.52
DDR1-228ENST00000376575 YEATS2Q9ULM3 1422 aa30.76■■■□□ 2.51
DDR1-228ENST00000376575 ZFYVE16Q7Z3T8 1539 aa30.76■■■□□ 2.51
DDR1-228ENST00000376575 CCDC141Q6ZP82 1450 aa30.75■■■□□ 2.51
DDR1-228ENST00000376575 KIDINS220Q9ULH0 1771 aa30.74■■■□□ 2.51
DDR1-228ENST00000376575 INO80Q9ULG1 1556 aaPredicted RBP30.71■■■□□ 2.51
DDR1-228ENST00000376575 SPAG9O60271 1321 aaKnown RBP30.7■■■□□ 2.5
DDR1-228ENST00000376575 RTEL1-TNFRSF6BF6WH68 1400 aa30.69■■■□□ 2.5
DDR1-228ENST00000376575 DIP2CQ9Y2E4 1556 aa30.67■■■□□ 2.5
DDR1-228ENST00000376575 ATP10AO60312 1499 aa30.67■■■□□ 2.5
DDR1-228ENST00000376575 ATP7AQ04656 1500 aa30.67■■■□□ 2.5
DDR1-228ENST00000376575 ABCA6Q8N139 1617 aa30.66■■■□□ 2.5
DDR1-228ENST00000376575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.65■■■□□ 2.5
DDR1-228ENST00000376575 ABCC5O15440 1437 aa30.64■■■□□ 2.5
DDR1-228ENST00000376575 MAST1Q9Y2H9 1570 aa30.64■■■□□ 2.5
DDR1-228ENST00000376575 DNMT1P26358 1616 aaKnown RBP30.64■■■□□ 2.5
DDR1-228ENST00000376575 RRBP1Q9P2E9 1410 aaKnown RBP30.64■■■□□ 2.49
DDR1-228ENST00000376575 REREQ9P2R6 1566 aa30.63■■■□□ 2.49
DDR1-228ENST00000376575 DAPK1P53355 1430 aa30.61■■■□□ 2.49
DDR1-228ENST00000376575 C9orf84Q5VXU9 1444 aa30.61■■■□□ 2.49
DDR1-228ENST00000376575 SIGLEC1Q9BZZ2 1709 aa30.6■■■□□ 2.49
DDR1-228ENST00000376575 SHANK2Q9UPX8 1470 aa30.6■■■□□ 2.49
DDR1-228ENST00000376575 CROCC2H7BZ55 1655 aa30.59■■■□□ 2.49
DDR1-228ENST00000376575 TSPY4P0CV99 314 aa30.59■■■□□ 2.49
DDR1-228ENST00000376575 TSPY10P0CW01 314 aa30.59■■■□□ 2.49
DDR1-228ENST00000376575 FAM50AQ14320 339 aaKnown RBP30.56■■■□□ 2.48
DDR1-228ENST00000376575 MYT1LQ9UL68 1186 aa30.55■■■□□ 2.48
DDR1-228ENST00000376575 PLXNC1O60486 1568 aa30.53■■■□□ 2.48
DDR1-228ENST00000376575 ADGBQ8N7X0 1667 aa30.52■■■□□ 2.48
DDR1-228ENST00000376575 AGLP35573 1532 aa30.52■■■□□ 2.48
DDR1-228ENST00000376575 A2MP01023 1474 aa30.5■■■□□ 2.47
DDR1-228ENST00000376575 PTPRKQ15262 1439 aa30.47■■■□□ 2.47
DDR1-228ENST00000376575 DHX29Q7Z478 1369 aaKnown RBP30.46■■■□□ 2.47
DDR1-228ENST00000376575 BCORL1Q5H9F3 1711 aa30.46■■■□□ 2.47
DDR1-228ENST00000376575 ADGRL2O95490 1459 aa30.45■■■□□ 2.47
DDR1-228ENST00000376575 KDM4FA0A1W2PPD8 638 aa30.44■■■□□ 2.46
DDR1-228ENST00000376575 NCOA1Q15788 1441 aa30.43■■■□□ 2.46
DDR1-228ENST00000376575 ADAMTSL3P82987 1691 aa30.42■■■□□ 2.46
DDR1-228ENST00000376575 ARID4BQ4LE39 1312 aaPredicted RBP30.42■■■□□ 2.46
DDR1-228ENST00000376575 ANKRD30AQ9BXX3 1397 aa30.38■■■□□ 2.45
DDR1-228ENST00000376575 DUOX2Q9NRD8 1548 aa30.37■■■□□ 2.45
DDR1-228ENST00000376575 CHIC2Q9UKJ5 165 aa30.37■■■□□ 2.45
DDR1-228ENST00000376575 ROCK1Q13464 1354 aa30.37■■■□□ 2.45
DDR1-228ENST00000376575 KIF15Q9NS87 1388 aa30.37■■■□□ 2.45
DDR1-228ENST00000376575 RRP7BPQ9NSQ0 103 aa30.33■■■□□ 2.45
DDR1-228ENST00000376575 EIF2AK4Q9P2K8 1649 aaKnown RBP30.3■■■□□ 2.44
DDR1-228ENST00000376575 ERBINQ96RT1 1412 aa30.3■■■□□ 2.44
DDR1-228ENST00000376575 MADDQ8WXG6 1647 aa30.28■■■□□ 2.44
DDR1-228ENST00000376575 ITGAEP38570 1179 aa30.26■■■□□ 2.43
DDR1-228ENST00000376575 MLECQ14165 292 aa30.26■■■□□ 2.43
DDR1-228ENST00000376575 KIF3BO15066 747 aa30.24■■■□□ 2.43
DDR1-228ENST00000376575 PPP6R1Q9UPN7 881 aa30.24■■■□□ 2.43
DDR1-228ENST00000376575 RNF17Q9BXT8 1623 aaKnown RBP30.24■■■□□ 2.43
DDR1-228ENST00000376575 FER1L4A9Z1Z3 1794 aa30.23■■■□□ 2.43
DDR1-228ENST00000376575 ANKRD50Q9ULJ7 1429 aa30.2■■■□□ 2.42
DDR1-228ENST00000376575 MROH1Q8NDA8 1641 aa30.18■■■□□ 2.42
DDR1-228ENST00000376575 GGT6Q6P531 493 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms