RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 DNMBPQ6XZF7 1577 aa15.9■□□□□ 0.14
MCF2L-202ENST00000375597 CFDP1Q9UEE9 299 aaPredicted RBP15.9■□□□□ 0.14
MCF2L-202ENST00000375597 EFCAB5A4FU69 1503 aa15.89■□□□□ 0.14
MCF2L-202ENST00000375597 URB2Q14146 1524 aaKnown RBP15.89■□□□□ 0.14
MCF2L-202ENST00000375597 CCDC7Q96M83 1385 aa15.89■□□□□ 0.13
MCF2L-202ENST00000375597 DCAF11Q8TEB1 546 aa15.89■□□□□ 0.13
MCF2L-202ENST00000375597 SLC4A3P48751 1232 aa15.88■□□□□ 0.13
MCF2L-202ENST00000375597 FYCO1Q9BQS8 1478 aa15.87■□□□□ 0.13
MCF2L-202ENST00000375597 CUL7Q14999 1698 aa15.87■□□□□ 0.13
MCF2L-202ENST00000375597 ABCA10Q8WWZ4 1543 aa15.87■□□□□ 0.13
MCF2L-202ENST00000375597 EXOC6Q8TAG9 804 aa15.87■□□□□ 0.13
MCF2L-202ENST00000375597 CASKIN1Q8WXD9 1431 aa15.86■□□□□ 0.13
MCF2L-202ENST00000375597 CTTNBP2Q8WZ74 1663 aa15.86■□□□□ 0.13
MCF2L-202ENST00000375597 MYOM3Q5VTT5 1437 aa15.86■□□□□ 0.13
MCF2L-202ENST00000375597 ST20-MTHFSA0A0A6YYL1 179 aa15.84■□□□□ 0.13
MCF2L-202ENST00000375597 ARXQ96QS3 562 aa15.84■□□□□ 0.13
MCF2L-202ENST00000375597 HFM1A2PYH4 1435 aa15.84■□□□□ 0.13
MCF2L-202ENST00000375597 FANCIQ9NVI1 1328 aa15.84■□□□□ 0.13
MCF2L-202ENST00000375597 CDCA7LQ96GN5 454 aa15.82■□□□□ 0.12
MCF2L-202ENST00000375597 MYT1LQ9UL68 1186 aa15.82■□□□□ 0.12
MCF2L-202ENST00000375597 CNTLNQ9NXG0 1405 aa15.82■□□□□ 0.12
MCF2L-202ENST00000375597 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.82■□□□□ 0.123e-7■■□□□ 13
MCF2L-202ENST00000375597 ZBED9Q6R2W3 1325 aa15.82■□□□□ 0.12
MCF2L-202ENST00000375597 CDK13Q14004 1512 aaKnown RBP15.81■□□□□ 0.12
MCF2L-202ENST00000375597 NUDCQ9Y266 331 aa15.8■□□□□ 0.12
MCF2L-202ENST00000375597 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-202ENST00000375597 NEFMP07197 916 aa15.78■□□□□ 0.12
MCF2L-202ENST00000375597 DAXXQ9UER7 740 aaPredicted RBP15.76■□□□□ 0.11
MCF2L-202ENST00000375597 USP47Q96K76 1375 aa15.76■□□□□ 0.11
MCF2L-202ENST00000375597 RGS3P49796 1198 aa15.76■□□□□ 0.11
MCF2L-202ENST00000375597 PTPN23Q9H3S7 1636 aa15.76■□□□□ 0.11
MCF2L-202ENST00000375597 HNRNPMP52272 730 aaKnown RBP eCLIP15.75■□□□□ 0.11
MCF2L-202ENST00000375597 IL27Q8NEV9 243 aa15.75■□□□□ 0.11
MCF2L-202ENST00000375597 KIF21AQ7Z4S6 1674 aa15.75■□□□□ 0.11
MCF2L-202ENST00000375597 GAPVD1Q14C86 1478 aa15.75■□□□□ 0.11
MCF2L-202ENST00000375597 CHMP7Q8WUX9 453 aaPredicted RBP15.74■□□□□ 0.11
MCF2L-202ENST00000375597 SNAPC4Q5SXM2 1469 aa15.73■□□□□ 0.11
MCF2L-202ENST00000375597 KDM6BO15054 1643 aa15.72■□□□□ 0.11
MCF2L-202ENST00000375597 IPO9Q96P70 1041 aaKnown RBP15.72■□□□□ 0.11
MCF2L-202ENST00000375597 NUP155O75694 1391 aa15.72■□□□□ 0.11
MCF2L-202ENST00000375597 SAMD9Q5K651 1589 aa15.72■□□□□ 0.11
MCF2L-202ENST00000375597 RCAN3Q9UKA8 241 aa15.71■□□□□ 0.11
MCF2L-202ENST00000375597 ERCC6Q03468 1493 aa15.71■□□□□ 0.11
MCF2L-202ENST00000375597 TSPY4P0CV99 314 aa15.69■□□□□ 0.1
MCF2L-202ENST00000375597 TSPY10P0CW01 314 aa15.69■□□□□ 0.1
MCF2L-202ENST00000375597 NBPF1Q3BBV0 1214 aa15.69■□□□□ 0.1
MCF2L-202ENST00000375597 ABCA5Q8WWZ7 1642 aa15.69■□□□□ 0.1
MCF2L-202ENST00000375597 THOC2Q8NI27 1593 aaKnown RBP15.69■□□□□ 0.1
MCF2L-202ENST00000375597 NEUROD2Q15784 382 aa15.69■□□□□ 0.1
MCF2L-202ENST00000375597 ANO8Q9HCE9 1232 aaPredicted RBP15.69■□□□□ 0.1
MCF2L-202ENST00000375597 TNNT2P45379 298 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-202ENST00000375597 LRRIQ1Q96JM4 1722 aa15.68■□□□□ 0.1
MCF2L-202ENST00000375597 MRC2Q9UBG0 1479 aa15.67■□□□□ 0.1
MCF2L-202ENST00000375597 CCDC146Q8IYE0 955 aa15.67■□□□□ 0.1
MCF2L-202ENST00000375597 PNISRQ8TF01 805 aaKnown RBP15.66■□□□□ 0.1
MCF2L-202ENST00000375597 EIF5BO60841 1220 aaKnown RBP15.66■□□□□ 0.1
MCF2L-202ENST00000375597 CRBNQ96SW2 442 aa15.65■□□□□ 0.1
MCF2L-202ENST00000375597 MAGI3Q5TCQ9 1506 aa15.65■□□□□ 0.1
MCF2L-202ENST00000375597 PDE4AP27815 886 aa15.65■□□□□ 0.1
MCF2L-202ENST00000375597 RRP1P56182 461 aaKnown RBP15.65■□□□□ 0.1
MCF2L-202ENST00000375597 PRG4Q92954 1404 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-202ENST00000375597 NCOA1Q15788 1441 aa15.64■□□□□ 0.09
MCF2L-202ENST00000375597 SUPT6HQ7KZ85 1726 aaKnown RBP15.64■□□□□ 0.09
MCF2L-202ENST00000375597 C20orf194Q5TEA3 1177 aa15.64■□□□□ 0.09
MCF2L-202ENST00000375597 ANKRD30BQ9BXX2 1392 aa15.64■□□□□ 0.09
MCF2L-202ENST00000375597 GRIN2BQ13224 1484 aa15.64■□□□□ 0.09
MCF2L-202ENST00000375597 EHBP1L1Q8N3D4 1523 aa15.63■□□□□ 0.09
MCF2L-202ENST00000375597 ROCK2O75116 1388 aaKnown RBP15.62■□□□□ 0.09
MCF2L-202ENST00000375597 PLEKHD1A6NEE1 506 aa15.62■□□□□ 0.09
MCF2L-202ENST00000375597 ZNF608Q9ULD9 1512 aaPredicted RBP15.61■□□□□ 0.09
MCF2L-202ENST00000375597 PANK3Q9H999 370 aa15.6■□□□□ 0.09
MCF2L-202ENST00000375597 DENND4BO75064 1496 aaPredicted RBP15.6■□□□□ 0.09
MCF2L-202ENST00000375597 CANXP27824 592 aaKnown RBP15.58■□□□□ 0.09
MCF2L-202ENST00000375597 SPRYD3Q8NCJ5 442 aa15.58■□□□□ 0.09
MCF2L-202ENST00000375597 ERICH6BQ5W0A0 696 aa15.58■□□□□ 0.08
MCF2L-202ENST00000375597 CHGAP10645 457 aaKnown RBP15.58■□□□□ 0.08
MCF2L-202ENST00000375597 EPRSP07814 1512 aaKnown RBP15.57■□□□□ 0.08
MCF2L-202ENST00000375597 UGGT2Q9NYU1 1516 aa15.57■□□□□ 0.08
MCF2L-202ENST00000375597 ARHGEF11O15085 1522 aa15.57■□□□□ 0.08
MCF2L-202ENST00000375597 WDR43Q15061 677 aaKnown RBP eCLIP15.57■□□□□ 0.08
MCF2L-202ENST00000375597 TARBP1Q13395 1621 aaKnown RBP15.56■□□□□ 0.08
MCF2L-202ENST00000375597 ABCC5O15440 1437 aa15.56■□□□□ 0.08
MCF2L-202ENST00000375597 DAPK1P53355 1430 aa15.56■□□□□ 0.08
MCF2L-202ENST00000375597 GCC2Q8IWJ2 1684 aa15.55■□□□□ 0.08
MCF2L-202ENST00000375597 BRPF3Q9ULD4 1205 aa15.55■□□□□ 0.08
MCF2L-202ENST00000375597 KDM5BQ9UGL1 1544 aa15.54■□□□□ 0.08
MCF2L-202ENST00000375597 FRAT1Q92837 279 aaPredicted RBP15.54■□□□□ 0.08
MCF2L-202ENST00000375597 MYBBP1AQ9BQG0 1328 aaKnown RBP15.54■□□□□ 0.08
MCF2L-202ENST00000375597 TCOF1Q13428 1488 aaKnown RBP15.52■□□□□ 0.08
MCF2L-202ENST00000375597 HECW1Q76N89 1606 aa15.52■□□□□ 0.08
MCF2L-202ENST00000375597 DHX29Q7Z478 1369 aaKnown RBP15.52■□□□□ 0.08
MCF2L-202ENST00000375597 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
MCF2L-202ENST00000375597 ADAMTS8Q9UP79 889 aa15.52■□□□□ 0.07
MCF2L-202ENST00000375597 SMG6Q86US8 1419 aaKnown RBP15.51■□□□□ 0.07
MCF2L-202ENST00000375597 NLRP13Q86W25 1043 aa15.51■□□□□ 0.07
MCF2L-202ENST00000375597 BCL2L13Q9BXK5 485 aa15.51■□□□□ 0.07
MCF2L-202ENST00000375597 RRP7AQ9Y3A4 280 aaKnown RBP15.51■□□□□ 0.07
MCF2L-202ENST00000375597 KTN1Q86UP2 1357 aaKnown RBP15.51■□□□□ 0.07
MCF2L-202ENST00000375597 RPRD2Q5VT52 1461 aaKnown RBP15.5■□□□□ 0.07
MCF2L-202ENST00000375597 SLKQ9H2G2 1235 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms