RNA–Protein interactions for RNA: ENST00000375323.5

APOA1-204, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-204ENST00000375323 MTUS2Q5JR59 1369 aa24.42■■□□□ 1.5
APOA1-204ENST00000375323 POGZQ7Z3K3 1410 aa24.42■■□□□ 1.5
APOA1-204ENST00000375323 ZMYM4Q5VZL5 1548 aa24.39■■□□□ 1.49
APOA1-204ENST00000375323 CDC42BPBQ9Y5S2 1711 aa24.38■■□□□ 1.49
APOA1-204ENST00000375323 ARID4BQ4LE39 1312 aaPredicted RBP24.37■■□□□ 1.49
APOA1-204ENST00000375323 YEATS2Q9ULM3 1422 aa24.37■■□□□ 1.49
APOA1-204ENST00000375323 AFAP1Q8N556 730 aa24.37■■□□□ 1.49
APOA1-204ENST00000375323 MAGI2Q86UL8 1455 aa24.37■■□□□ 1.49
APOA1-204ENST00000375323 VPS8Q8N3P4 1428 aa24.36■■□□□ 1.49
APOA1-204ENST00000375323 PREX2Q70Z35 1606 aa24.36■■□□□ 1.49
APOA1-204ENST00000375323 ARHGEF40Q8TER5 1519 aa24.35■■□□□ 1.49
APOA1-204ENST00000375323 GPATCH8Q9UKJ3 1502 aaKnown RBP24.35■■□□□ 1.49
APOA1-204ENST00000375323 ZNF777Q9ULD5 760 aaPredicted RBP24.34■■□□□ 1.49
APOA1-204ENST00000375323 ZFYVE16Q7Z3T8 1539 aa24.34■■□□□ 1.49
APOA1-204ENST00000375323 CCNB3Q8WWL7 1395 aa24.33■■□□□ 1.49
APOA1-204ENST00000375323 ZNF518AQ6AHZ1 1483 aa24.32■■□□□ 1.48
APOA1-204ENST00000375323 CDC42BPAQ5VT25 1732 aa24.32■■□□□ 1.48
APOA1-204ENST00000375323 ARHGEF12Q9NZN5 1544 aa24.3■■□□□ 1.48
APOA1-204ENST00000375323 CFDP1Q9UEE9 299 aaPredicted RBP24.3■■□□□ 1.48
APOA1-204ENST00000375323 EHBP1L1Q8N3D4 1523 aa24.3■■□□□ 1.48
APOA1-204ENST00000375323 TRAPPC8Q9Y2L5 1435 aa24.29■■□□□ 1.48
APOA1-204ENST00000375323 MYT1LQ9UL68 1186 aa24.28■■□□□ 1.48
APOA1-204ENST00000375323 ABCC1P33527 1531 aa24.28■■□□□ 1.48
APOA1-204ENST00000375323 KDM5CP41229 1560 aa24.26■■□□□ 1.47
APOA1-204ENST00000375323 ATP10AO60312 1499 aa24.26■■□□□ 1.47
APOA1-204ENST00000375323 HNRNPMP52272 730 aaKnown RBP eCLIP24.25■■□□□ 1.47
APOA1-204ENST00000375323 TIAM1Q13009 1591 aa24.24■■□□□ 1.47
APOA1-204ENST00000375323 ADAMTSL3P82987 1691 aa24.24■■□□□ 1.47
APOA1-204ENST00000375323 SAMD9LQ8IVG5 1584 aa24.23■■□□□ 1.47
APOA1-204ENST00000375323 BCORL1Q5H9F3 1711 aa24.22■■□□□ 1.47
APOA1-204ENST00000375323 MLH3Q9UHC1 1453 aa24.21■■□□□ 1.47
APOA1-204ENST00000375323 ITSN2Q9NZM3 1697 aa24.21■■□□□ 1.47
APOA1-204ENST00000375323 C9orf84Q5VXU9 1444 aa24.2■■□□□ 1.46
APOA1-204ENST00000375323 ZNF644Q9H582 1327 aaPredicted RBP24.2■■□□□ 1.46
APOA1-204ENST00000375323 KIAA1107Q9UPP5 1409 aa24.19■■□□□ 1.46
APOA1-204ENST00000375323 SIGLEC1Q9BZZ2 1709 aa24.19■■□□□ 1.46
APOA1-204ENST00000375323 MLECQ14165 292 aa24.19■■□□□ 1.46
APOA1-204ENST00000375323 KANK4Q5T7N3 995 aaPredicted RBP24.19■■□□□ 1.46
APOA1-204ENST00000375323 NCOA2Q15596 1464 aa24.19■■□□□ 1.46
APOA1-204ENST00000375323 HECW2Q9P2P5 1572 aa24.18■■□□□ 1.46
APOA1-204ENST00000375323 SYCP2Q9BX26 1530 aa24.18■■□□□ 1.46
APOA1-204ENST00000375323 PTPRMP28827 1452 aa24.18■■□□□ 1.46
APOA1-204ENST00000375323 LRRC9Q6ZRR7 1453 aa24.18■■□□□ 1.46
APOA1-204ENST00000375323 PLEKHH2Q8IVE3 1493 aa24.18■■□□□ 1.46
APOA1-204ENST00000375323 MAP3K1Q13233 1512 aa24.16■■□□□ 1.46
APOA1-204ENST00000375323 SPAG9O60271 1321 aaKnown RBP24.14■■□□□ 1.46
APOA1-204ENST00000375323 MADDQ8WXG6 1647 aa24.14■■□□□ 1.46
APOA1-204ENST00000375323 SUPT6HQ7KZ85 1726 aaKnown RBP24.14■■□□□ 1.45
APOA1-204ENST00000375323 DIP2CQ9Y2E4 1556 aa24.14■■□□□ 1.45
APOA1-204ENST00000375323 ABCA6Q8N139 1617 aa24.11■■□□□ 1.45
APOA1-204ENST00000375323 APLP2Q06481 763 aa24.1■■□□□ 1.45
APOA1-204ENST00000375323 KIDINS220Q9ULH0 1771 aa24.09■■□□□ 1.45
APOA1-204ENST00000375323 MBD5Q9P267 1494 aa24.08■■□□□ 1.45
APOA1-204ENST00000375323 REREQ9P2R6 1566 aa24.07■■□□□ 1.44
APOA1-204ENST00000375323 RIMS1Q86UR5 1692 aaKnown RBP24.06■■□□□ 1.44
APOA1-204ENST00000375323 PLPPR3Q6T4P5 718 aa24.04■■□□□ 1.44
APOA1-204ENST00000375323 CAMSAP2Q08AD1 1489 aa24.03■■□□□ 1.44
APOA1-204ENST00000375323 AGLP35573 1532 aa24.03■■□□□ 1.44
APOA1-204ENST00000375323 ATP7AQ04656 1500 aa24.03■■□□□ 1.44
APOA1-204ENST00000375323 RSPH4AQ5TD94 716 aa24.01■■□□□ 1.43
APOA1-204ENST00000375323 INO80Q9ULG1 1556 aaPredicted RBP23.99■■□□□ 1.43
APOA1-204ENST00000375323 RTEL1-TNFRSF6BF6WH68 1400 aa23.98■■□□□ 1.43
APOA1-204ENST00000375323 MYOM3Q5VTT5 1437 aa23.98■■□□□ 1.43
APOA1-204ENST00000375323 FER1L4A9Z1Z3 1794 aa23.97■■□□□ 1.43
APOA1-204ENST00000375323 CEBPAP49715 358 aaPredicted RBP23.97■■□□□ 1.43
APOA1-204ENST00000375323 A2MP01023 1474 aa23.96■■□□□ 1.43
APOA1-204ENST00000375323 CCDC141Q6ZP82 1450 aa23.96■■□□□ 1.43
APOA1-204ENST00000375323 MIA2Q96PC5 1412 aa23.94■■□□□ 1.42
APOA1-204ENST00000375323 TSPY4P0CV99 314 aa23.93■■□□□ 1.42
APOA1-204ENST00000375323 TSPY10P0CW01 314 aa23.93■■□□□ 1.42
APOA1-204ENST00000375323 ESF1Q9H501 851 aaKnown RBP23.93■■□□□ 1.42
APOA1-204ENST00000375323 ARHGEF5Q12774 1597 aa23.9■■□□□ 1.42
APOA1-204ENST00000375323 PLXNC1O60486 1568 aa23.89■■□□□ 1.41
APOA1-204ENST00000375323 DHX29Q7Z478 1369 aaKnown RBP23.89■■□□□ 1.41
APOA1-204ENST00000375323 GGT6Q6P531 493 aa23.88■■□□□ 1.41
APOA1-204ENST00000375323 LMTK3Q96Q04 1460 aa23.87■■□□□ 1.41
APOA1-204ENST00000375323 ADGBQ8N7X0 1667 aa23.85■■□□□ 1.41
APOA1-204ENST00000375323 CNTLNQ9NXG0 1405 aa23.84■■□□□ 1.41
APOA1-204ENST00000375323 HSPA2P54652 639 aa23.83■■□□□ 1.41
APOA1-204ENST00000375323 KIF3BO15066 747 aa23.82■■□□□ 1.4
APOA1-204ENST00000375323 FGD6Q6ZV73 1430 aa23.82■■□□□ 1.4
APOA1-204ENST00000375323 PPP6R1Q9UPN7 881 aa23.81■■□□□ 1.4
APOA1-204ENST00000375323 ZMYM3Q14202 1370 aa23.79■■□□□ 1.4
APOA1-204ENST00000375323 PTPN23Q9H3S7 1636 aa23.78■■□□□ 1.4
APOA1-204ENST00000375323 MAST1Q9Y2H9 1570 aa23.78■■□□□ 1.4
APOA1-204ENST00000375323 C3P01024 1663 aa23.76■■□□□ 1.39
APOA1-204ENST00000375323 TCOF1Q13428 1488 aaKnown RBP23.76■■□□□ 1.39
APOA1-204ENST00000375323 ABCC5O15440 1437 aa23.76■■□□□ 1.39
APOA1-204ENST00000375323 UHRF1BP1Q6BDS2 1440 aa23.72■■□□□ 1.39
APOA1-204ENST00000375323 SETD1BQ9UPS6 1966 aaKnown RBP23.71■■□□□ 1.39
APOA1-204ENST00000375323 MROH2AA6NES4 1674 aa23.71■■□□□ 1.39
APOA1-204ENST00000375323 DAPK1P53355 1430 aa23.71■■□□□ 1.39
APOA1-204ENST00000375323 CLTCQ00610 1675 aaKnown RBP23.7■■□□□ 1.39
APOA1-204ENST00000375323 PREX1Q8TCU6 1659 aa23.7■■□□□ 1.39
APOA1-204ENST00000375323 FAM50AQ14320 339 aaKnown RBP23.69■■□□□ 1.38
APOA1-204ENST00000375323 PPARGC1BQ86YN6 1023 aaKnown RBP23.69■■□□□ 1.38
APOA1-204ENST00000375323 RRP7BPQ9NSQ0 103 aa23.69■■□□□ 1.38
APOA1-204ENST00000375323 SHANK2Q9UPX8 1470 aa23.68■■□□□ 1.38
APOA1-204ENST00000375323 NPATQ14207 1427 aa23.68■■□□□ 1.38
APOA1-204ENST00000375323 CHIC2Q9UKJ5 165 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms