RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 SETD5Q9C0A6 1442 aa25.16■■□□□ 1.62
COL15A1-201ENST00000375001 IPO9Q96P70 1041 aaKnown RBP25.15■■□□□ 1.62
COL15A1-201ENST00000375001 RSPH6AQ9H0K4 717 aa25.13■■□□□ 1.61
COL15A1-201ENST00000375001 PTMSP20962 102 aa25.12■■□□□ 1.61
COL15A1-201ENST00000375001 MCCP23508 829 aa25.11■■□□□ 1.61
COL15A1-201ENST00000375001 NUDCQ9Y266 331 aa25.11■■□□□ 1.61
COL15A1-201ENST00000375001 TCERG1O14776 1098 aaKnown RBP25.08■■□□□ 1.6
COL15A1-201ENST00000375001 DCAF11Q8TEB1 546 aa25.07■■□□□ 1.6
COL15A1-201ENST00000375001 FHAD1B1AJZ9 1412 aa25.06■■□□□ 1.6
COL15A1-201ENST00000375001 BAZ1AQ9NRL2 1556 aaPredicted RBP25.06■■□□□ 1.6
COL15A1-201ENST00000375001 RAB3GAP2Q9H2M9 1393 aa25.05■■□□□ 1.6
COL15A1-201ENST00000375001 ABCC8Q09428 1581 aa25.05■■□□□ 1.6
COL15A1-201ENST00000375001 CCDC88BA6NC98 1476 aa25.03■■□□□ 1.6
COL15A1-201ENST00000375001 FOXD1Q16676 465 aa25.02■■□□□ 1.6
COL15A1-201ENST00000375001 U2SURPO15042 1029 aaKnown RBP25.02■■□□□ 1.6
COL15A1-201ENST00000375001 NACADO15069 1562 aa25.01■■□□□ 1.59
COL15A1-201ENST00000375001 SYAP1Q96A49 352 aaPredicted RBP25■■□□□ 1.59
COL15A1-201ENST00000375001 NOC3LQ8WTT2 800 aaKnown RBP24.99■■□□□ 1.59
COL15A1-201ENST00000375001 GOLGA6L1Q8N7Z2 621 aa24.99■■□□□ 1.59
COL15A1-201ENST00000375001 CARMIL1Q5VZK9 1371 aa24.98■■□□□ 1.59
COL15A1-201ENST00000375001 PPP1R15AO75807 674 aaPredicted RBP24.98■■□□□ 1.59
COL15A1-201ENST00000375001 TMF1P82094 1093 aa24.96■■□□□ 1.59
COL15A1-201ENST00000375001 APBB1O00213 710 aa24.95■■□□□ 1.59
COL15A1-201ENST00000375001 CFAP44Q96MT7 982 aa24.95■■□□□ 1.59
COL15A1-201ENST00000375001 CALD1Q05682 793 aaKnown RBP24.95■■□□□ 1.58
COL15A1-201ENST00000375001 NCBP3Q53F19 620 aaKnown RBP24.93■■□□□ 1.58
COL15A1-201ENST00000375001 RCAN3Q9UKA8 241 aa24.92■■□□□ 1.58
COL15A1-201ENST00000375001 GNL2Q13823 731 aaKnown RBP24.92■■□□□ 1.58
COL15A1-201ENST00000375001 CUX2O14529 1486 aa24.92■■□□□ 1.58
COL15A1-201ENST00000375001 ARHGAP35Q9NRY4 1499 aa24.91■■□□□ 1.58
COL15A1-201ENST00000375001 MFAP1P55081 439 aaKnown RBP24.91■■□□□ 1.58
COL15A1-201ENST00000375001 CLSTN1O94985 981 aa24.9■■□□□ 1.58
COL15A1-201ENST00000375001 MROH2BQ7Z745 1585 aa24.9■■□□□ 1.58
COL15A1-201ENST00000375001 USP35Q9P2H5 1018 aa24.88■■□□□ 1.57
COL15A1-201ENST00000375001 FOXD4L1Q9NU39 408 aa24.88■■□□□ 1.57
COL15A1-201ENST00000375001 GSE1Q14687 1217 aa24.87■■□□□ 1.57
COL15A1-201ENST00000375001 KIAA1211Q6ZU35 1233 aa24.86■■□□□ 1.57
COL15A1-201ENST00000375001 RWDD1Q9H446 243 aaPredicted RBP24.85■■□□□ 1.57
COL15A1-201ENST00000375001 PKD2Q13563 968 aa24.85■■□□□ 1.57
COL15A1-201ENST00000375001 A0A0U1RQG5 324 aaPredicted RBP24.83■■□□□ 1.57
COL15A1-201ENST00000375001 HTATSF1O43719 755 aaKnown RBP24.82■■□□□ 1.56
COL15A1-201ENST00000375001 MPHOSPH9Q99550 1183 aa24.82■■□□□ 1.56
COL15A1-201ENST00000375001 KTN1Q86UP2 1357 aaKnown RBP24.82■■□□□ 1.56
COL15A1-201ENST00000375001 TPM4P67936 248 aa24.82■■□□□ 1.56
COL15A1-201ENST00000375001 ZNF771Q7L3S4 317 aaPredicted RBP24.82■■□□□ 1.56
COL15A1-201ENST00000375001 GOLGA2Q08379 1002 aa24.81■■□□□ 1.56
COL15A1-201ENST00000375001 SETQ01105 290 aaPredicted RBP24.79■■□□□ 1.56
COL15A1-201ENST00000375001 POGKQ9P215 609 aa24.79■■□□□ 1.56
COL15A1-201ENST00000375001 SLC4A3P48751 1232 aa24.77■■□□□ 1.56
COL15A1-201ENST00000375001 ITPRIPQ8IWB1 547 aa24.77■■□□□ 1.56
COL15A1-201ENST00000375001 EIF4G1Q04637 1599 aaKnown RBP24.77■■□□□ 1.56
COL15A1-201ENST00000375001 DHX57Q6P158 1386 aaKnown RBP24.75■■□□□ 1.55
COL15A1-201ENST00000375001 IPO8O15397 1037 aaKnown RBP24.75■■□□□ 1.55
COL15A1-201ENST00000375001 MORC1Q86VD1 984 aa24.75■■□□□ 1.55
COL15A1-201ENST00000375001 L3MBTL2Q969R5 705 aa24.75■■□□□ 1.55
COL15A1-201ENST00000375001 FAM13BQ9NYF5 915 aa24.74■■□□□ 1.55
COL15A1-201ENST00000375001 RALBP1Q15311 655 aa24.74■■□□□ 1.55
COL15A1-201ENST00000375001 HAP1P54257 671 aaPredicted RBP24.73■■□□□ 1.55
COL15A1-201ENST00000375001 NOL8Q76FK4 1167 aaKnown RBP24.73■■□□□ 1.55
COL15A1-201ENST00000375001 DDX11L8A8MPP1 907 aa24.72■■□□□ 1.55
COL15A1-201ENST00000375001 HSP90B1P14625 803 aaKnown RBP24.71■■□□□ 1.55
COL15A1-201ENST00000375001 PDE4CQ08493 712 aa24.71■■□□□ 1.55
COL15A1-201ENST00000375001 FOXD4L5Q5VV16 416 aaPredicted RBP24.71■■□□□ 1.55
COL15A1-201ENST00000375001 FOXD4L4Q8WXT5 416 aaPredicted RBP24.71■■□□□ 1.55
COL15A1-201ENST00000375001 PMFBP1Q8TBY8 1022 aa24.7■■□□□ 1.55
COL15A1-201ENST00000375001 PHF14O94880 888 aa24.69■■□□□ 1.54
COL15A1-201ENST00000375001 NPHP1O15259 732 aa24.68■■□□□ 1.54
COL15A1-201ENST00000375001 CSPP1Q1MSJ5 1256 aa24.67■■□□□ 1.54
COL15A1-201ENST00000375001 DDX49Q9Y6V7 483 aaKnown RBP24.67■■□□□ 1.54
COL15A1-201ENST00000375001 ISY1Q9ULR0 285 aaKnown RBP24.67■■□□□ 1.54
COL15A1-201ENST00000375001 LMOD2Q6P5Q4 547 aa24.66■■□□□ 1.54
COL15A1-201ENST00000375001 ROCK2O75116 1388 aaKnown RBP24.66■■□□□ 1.54
COL15A1-201ENST00000375001 TPM3P06753 285 aa24.65■■□□□ 1.54
COL15A1-201ENST00000375001 CCAR2Q8N163 923 aaKnown RBP24.65■■□□□ 1.54
COL15A1-201ENST00000375001 CREBRFQ8IUR6 639 aa24.65■■□□□ 1.54
COL15A1-201ENST00000375001 SAFB2Q14151 953 aaKnown RBP eCLIP24.64■■□□□ 1.53
COL15A1-201ENST00000375001 FMN1Q68DA7 1419 aa24.63■■□□□ 1.53
COL15A1-201ENST00000375001 CALRP27797 417 aaKnown RBP24.63■■□□□ 1.53
COL15A1-201ENST00000375001 PDE4AP27815 886 aa24.63■■□□□ 1.53
COL15A1-201ENST00000375001 SRPK2P78362 688 aaKnown RBP24.61■■□□□ 1.53
COL15A1-201ENST00000375001 PATL2C9JE40 543 aaKnown RBP24.6■■□□□ 1.53
COL15A1-201ENST00000375001 NUP155O75694 1391 aa24.6■■□□□ 1.53
COL15A1-201ENST00000375001 TRIM6-TRIM34B2RNG4 842 aa24.59■■□□□ 1.53
COL15A1-201ENST00000375001 CLUAP1Q96AJ1 413 aa24.59■■□□□ 1.53
COL15A1-201ENST00000375001 SOX12O15370 315 aa24.59■■□□□ 1.53
COL15A1-201ENST00000375001 ZNF592Q92610 1267 aa24.58■■□□□ 1.53
COL15A1-201ENST00000375001 RAPGEF2Q9Y4G8 1499 aa24.58■■□□□ 1.53
COL15A1-201ENST00000375001 CCDC34Q96HJ3 373 aa24.58■■□□□ 1.53
COL15A1-201ENST00000375001 ST18O60284 1047 aa24.56■■□□□ 1.52
COL15A1-201ENST00000375001 WIZO95785 1651 aa24.56■■□□□ 1.52
COL15A1-201ENST00000375001 GPS2Q13227 327 aa24.56■■□□□ 1.52
COL15A1-201ENST00000375001 SKOR2Q2VWA4 1001 aaPredicted RBP24.56■■□□□ 1.52
COL15A1-201ENST00000375001 NLRP13Q86W25 1043 aa24.56■■□□□ 1.52
COL15A1-201ENST00000375001 FANCIQ9NVI1 1328 aa24.56■■□□□ 1.52
COL15A1-201ENST00000375001 U2AF1L5P0DN76 240 aaPredicted RBP24.56■■□□□ 1.52
COL15A1-201ENST00000375001 U2AF1Q01081 240 aaKnown RBP eCLIP24.56■■□□□ 1.52
COL15A1-201ENST00000375001 CCDC146Q8IYE0 955 aa24.54■■□□□ 1.52
COL15A1-201ENST00000375001 PKNOX2Q96KN3 472 aa24.54■■□□□ 1.52
COL15A1-201ENST00000375001 RTF1Q92541 710 aaKnown RBP24.54■■□□□ 1.52
COL15A1-201ENST00000375001 RUSC2Q8N2Y8 1516 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms