RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 KCNH8Q96L42 1107 aa26.26■■□□□ 1.79
HLA-DMA-201ENST00000374843 CAMSAP2Q08AD1 1489 aa26.25■■□□□ 1.79
HLA-DMA-201ENST00000374843 PCGF6Q9BYE7 350 aa26.25■■□□□ 1.79
HLA-DMA-201ENST00000374843 CFDP1Q9UEE9 299 aaPredicted RBP26.23■■□□□ 1.79
HLA-DMA-201ENST00000374843 ARHGAP5Q13017 1502 aa26.23■■□□□ 1.79
HLA-DMA-201ENST00000374843 MAP3K4Q9Y6R4 1608 aa26.21■■□□□ 1.79
HLA-DMA-201ENST00000374843 SAMD9LQ8IVG5 1584 aa26.21■■□□□ 1.79
HLA-DMA-201ENST00000374843 DNMT1P26358 1616 aaKnown RBP26.17■■□□□ 1.78
HLA-DMA-201ENST00000374843 FAM50AQ14320 339 aaKnown RBP26.17■■□□□ 1.78
HLA-DMA-201ENST00000374843 PLEKHH2Q8IVE3 1493 aa26.17■■□□□ 1.78
HLA-DMA-201ENST00000374843 ARHGEF5Q12774 1597 aa26.15■■□□□ 1.78
HLA-DMA-201ENST00000374843 CFAP74Q9C0B2 1584 aa26.15■■□□□ 1.78
HLA-DMA-201ENST00000374843 ABCC1P33527 1531 aa26.14■■□□□ 1.78
HLA-DMA-201ENST00000374843 CD109Q6YHK3 1445 aa26.14■■□□□ 1.77
HLA-DMA-201ENST00000374843 KIAA1107Q9UPP5 1409 aa26.14■■□□□ 1.77
HLA-DMA-201ENST00000374843 ZNF644Q9H582 1327 aaPredicted RBP26.13■■□□□ 1.77
HLA-DMA-201ENST00000374843 CROCC2H7BZ55 1655 aa26.12■■□□□ 1.77
HLA-DMA-201ENST00000374843 FANCAO15360 1455 aa26.11■■□□□ 1.77
HLA-DMA-201ENST00000374843 MBD5Q9P267 1494 aa26.11■■□□□ 1.77
HLA-DMA-201ENST00000374843 KIF13AQ9H1H9 1805 aa26.1■■□□□ 1.77
HLA-DMA-201ENST00000374843 DAPK1P53355 1430 aa26.1■■□□□ 1.77
HLA-DMA-201ENST00000374843 ABCC5O15440 1437 aa26.09■■□□□ 1.77
HLA-DMA-201ENST00000374843 EFCAB2Q5VUJ9 269 aa26.09■■□□□ 1.77
HLA-DMA-201ENST00000374843 SHANK2Q9UPX8 1470 aa26.09■■□□□ 1.77
HLA-DMA-201ENST00000374843 SYCP2Q9BX26 1530 aa26.09■■□□□ 1.77
HLA-DMA-201ENST00000374843 PTPRKQ15262 1439 aa26.08■■□□□ 1.77
HLA-DMA-201ENST00000374843 NEO1Q92859 1461 aa26.06■■□□□ 1.76
HLA-DMA-201ENST00000374843 AKNAQ7Z591 1439 aa26.05■■□□□ 1.76
HLA-DMA-201ENST00000374843 CCDC141Q6ZP82 1450 aa26.04■■□□□ 1.76
HLA-DMA-201ENST00000374843 ZNF777Q9ULD5 760 aaPredicted RBP26.04■■□□□ 1.76
HLA-DMA-201ENST00000374843 ARHGEF12Q9NZN5 1544 aa26.04■■□□□ 1.76
HLA-DMA-201ENST00000374843 PPRC1Q5VV67 1664 aaKnown RBP26.03■■□□□ 1.76
HLA-DMA-201ENST00000374843 FAM69CQ0P6D2 419 aa26.01■■□□□ 1.75
HLA-DMA-201ENST00000374843 MAST1Q9Y2H9 1570 aa26.01■■□□□ 1.75
HLA-DMA-201ENST00000374843 ADGRL2O95490 1459 aa26■■□□□ 1.75
HLA-DMA-201ENST00000374843 ADGBQ8N7X0 1667 aa25.99■■□□□ 1.75
HLA-DMA-201ENST00000374843 ADGRL1O94910 1474 aa25.99■■□□□ 1.75
HLA-DMA-201ENST00000374843 ROCK1Q13464 1354 aa25.99■■□□□ 1.75
HLA-DMA-201ENST00000374843 RSPH4AQ5TD94 716 aa25.98■■□□□ 1.75
HLA-DMA-201ENST00000374843 TEX14Q8IWB6 1497 aa25.98■■□□□ 1.75
HLA-DMA-201ENST00000374843 ITGAEP38570 1179 aa25.97■■□□□ 1.75
HLA-DMA-201ENST00000374843 HFM1A2PYH4 1435 aa25.97■■□□□ 1.75
HLA-DMA-201ENST00000374843 GCC2Q8IWJ2 1684 aa25.95■■□□□ 1.74
HLA-DMA-201ENST00000374843 C9orf84Q5VXU9 1444 aa25.95■■□□□ 1.74
HLA-DMA-201ENST00000374843 TRAPPC8Q9Y2L5 1435 aa25.93■■□□□ 1.74
HLA-DMA-201ENST00000374843 HNRNPMP52272 730 aaKnown RBP eCLIP25.92■■□□□ 1.74
HLA-DMA-201ENST00000374843 SCAPERQ9BY12 1400 aa25.91■■□□□ 1.74
HLA-DMA-201ENST00000374843 NAIPQ13075 1403 aa25.9■■□□□ 1.74
HLA-DMA-201ENST00000374843 POGZQ7Z3K3 1410 aa25.9■■□□□ 1.74
HLA-DMA-201ENST00000374843 PLXNC1O60486 1568 aa25.9■■□□□ 1.74
HLA-DMA-201ENST00000374843 KDM5CP41229 1560 aa25.9■■□□□ 1.74
HLA-DMA-201ENST00000374843 ZFYVE16Q7Z3T8 1539 aa25.88■■□□□ 1.73
HLA-DMA-201ENST00000374843 INO80Q9ULG1 1556 aaPredicted RBP25.88■■□□□ 1.73
HLA-DMA-201ENST00000374843 ZNF518AQ6AHZ1 1483 aa25.88■■□□□ 1.73
HLA-DMA-201ENST00000374843 NCOA1Q15788 1441 aa25.88■■□□□ 1.73
HLA-DMA-201ENST00000374843 SETD5Q9C0A6 1442 aa25.88■■□□□ 1.73
HLA-DMA-201ENST00000374843 TSPOAP1O95153 1857 aa25.86■■□□□ 1.73
HLA-DMA-201ENST00000374843 ANKRD30AQ9BXX3 1397 aa25.85■■□□□ 1.73
HLA-DMA-201ENST00000374843 RTEL1-TNFRSF6BF6WH68 1400 aa25.85■■□□□ 1.73
HLA-DMA-201ENST00000374843 DENND4BO75064 1496 aaPredicted RBP25.84■■□□□ 1.73
HLA-DMA-201ENST00000374843 RICTORQ6R327 1708 aa25.83■■□□□ 1.73
HLA-DMA-201ENST00000374843 TSPY4P0CV99 314 aa25.83■■□□□ 1.73
HLA-DMA-201ENST00000374843 TSPY10P0CW01 314 aa25.83■■□□□ 1.73
HLA-DMA-201ENST00000374843 FRMPD1Q5SYB0 1578 aa25.82■■□□□ 1.72
HLA-DMA-201ENST00000374843 RAB3GAP2Q9H2M9 1393 aa25.82■■□□□ 1.72
HLA-DMA-201ENST00000374843 CHIC2Q9UKJ5 165 aa25.81■■□□□ 1.72
HLA-DMA-201ENST00000374843 ATP7AQ04656 1500 aa25.81■■□□□ 1.72
HLA-DMA-201ENST00000374843 ZMYM4Q5VZL5 1548 aa25.79■■□□□ 1.72
HLA-DMA-201ENST00000374843 HECW2Q9P2P5 1572 aa25.78■■□□□ 1.72
HLA-DMA-201ENST00000374843 HRCP23327 699 aa25.78■■□□□ 1.72
HLA-DMA-201ENST00000374843 MLH3Q9UHC1 1453 aa25.78■■□□□ 1.72
HLA-DMA-201ENST00000374843 KIF15Q9NS87 1388 aa25.77■■□□□ 1.72
HLA-DMA-201ENST00000374843 AFAP1Q8N556 730 aa25.76■■□□□ 1.71
HLA-DMA-201ENST00000374843 SPAG9O60271 1321 aaKnown RBP25.76■■□□□ 1.71
HLA-DMA-201ENST00000374843 KIDINS220Q9ULH0 1771 aa25.75■■□□□ 1.71
HLA-DMA-201ENST00000374843 RRP7BPQ9NSQ0 103 aa25.75■■□□□ 1.71
HLA-DMA-201ENST00000374843 KDM6BO15054 1643 aa25.74■■□□□ 1.71
HLA-DMA-201ENST00000374843 DUOX2Q9NRD8 1548 aa25.73■■□□□ 1.71
HLA-DMA-201ENST00000374843 ANKRD50Q9ULJ7 1429 aa25.71■■□□□ 1.71
HLA-DMA-201ENST00000374843 ERBINQ96RT1 1412 aa25.69■■□□□ 1.7
HLA-DMA-201ENST00000374843 ACIN1Q9UKV3 1341 aaKnown RBP25.67■■□□□ 1.7
HLA-DMA-201ENST00000374843 MAGI2Q86UL8 1455 aa25.67■■□□□ 1.7
HLA-DMA-201ENST00000374843 ABCA6Q8N139 1617 aa25.66■■□□□ 1.7
HLA-DMA-201ENST00000374843 COL17A1Q9UMD9 1497 aaPredicted RBP25.66■■□□□ 1.7
HLA-DMA-201ENST00000374843 TRHP20396 242 aaPredicted RBP25.65■■□□□ 1.7
HLA-DMA-201ENST00000374843 DIP2CQ9Y2E4 1556 aa25.65■■□□□ 1.7
HLA-DMA-201ENST00000374843 RAPGEF3O95398 923 aa25.64■■□□□ 1.7
HLA-DMA-201ENST00000374843 EIF2AK4Q9P2K8 1649 aaKnown RBP25.63■■□□□ 1.69
HLA-DMA-201ENST00000374843 UNC13BO14795 1591 aa25.61■■□□□ 1.69
HLA-DMA-201ENST00000374843 KDM5DQ9BY66 1539 aa25.61■■□□□ 1.69
HLA-DMA-201ENST00000374843 DHX57Q6P158 1386 aaKnown RBP25.6■■□□□ 1.69
HLA-DMA-201ENST00000374843 ARHGEF40Q8TER5 1519 aa25.58■■□□□ 1.69
HLA-DMA-201ENST00000374843 BCORL1Q5H9F3 1711 aa25.58■■□□□ 1.69
HLA-DMA-201ENST00000374843 REREQ9P2R6 1566 aa25.58■■□□□ 1.69
HLA-DMA-201ENST00000374843 A2MP01023 1474 aa25.58■■□□□ 1.69
HLA-DMA-201ENST00000374843 DHX29Q7Z478 1369 aaKnown RBP25.57■■□□□ 1.68
HLA-DMA-201ENST00000374843 DEPDC5O75140 1603 aa25.56■■□□□ 1.68
HLA-DMA-201ENST00000374843 YEATS2Q9ULM3 1422 aa25.56■■□□□ 1.68
HLA-DMA-201ENST00000374843 RNF17Q9BXT8 1623 aaKnown RBP25.52■■□□□ 1.68
HLA-DMA-201ENST00000374843 PZPP20742 1482 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms