RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 PREX2Q70Z35 1606 aa17.7■□□□□ 0.42
HSPG2-202ENST00000374676 FANCAO15360 1455 aa17.69■□□□□ 0.42
HSPG2-202ENST00000374676 CFAP74Q9C0B2 1584 aa17.69■□□□□ 0.42
HSPG2-202ENST00000374676 AKNAQ7Z591 1439 aa17.67■□□□□ 0.42
HSPG2-202ENST00000374676 ARHGAP5Q13017 1502 aa17.67■□□□□ 0.42
HSPG2-202ENST00000374676 CFDP1Q9UEE9 299 aaPredicted RBP17.66■□□□□ 0.42
HSPG2-202ENST00000374676 ITSN2Q9NZM3 1697 aa17.66■□□□□ 0.42
HSPG2-202ENST00000374676 COL17A1Q9UMD9 1497 aaPredicted RBP17.64■□□□□ 0.41
HSPG2-202ENST00000374676 KDM6BO15054 1643 aa17.64■□□□□ 0.41
HSPG2-202ENST00000374676 MYOM3Q5VTT5 1437 aa17.62■□□□□ 0.41
HSPG2-202ENST00000374676 ADGRL1O94910 1474 aa17.61■□□□□ 0.41
HSPG2-202ENST00000374676 MIA2Q96PC5 1412 aa17.6■□□□□ 0.41
HSPG2-202ENST00000374676 SCAPERQ9BY12 1400 aa17.6■□□□□ 0.41
HSPG2-202ENST00000374676 ZNF777Q9ULD5 760 aaPredicted RBP17.59■□□□□ 0.41
HSPG2-202ENST00000374676 SAMD9LQ8IVG5 1584 aa17.58■□□□□ 0.41
HSPG2-202ENST00000374676 DENND4BO75064 1496 aaPredicted RBP17.58■□□□□ 0.41
HSPG2-202ENST00000374676 PLEKHH2Q8IVE3 1493 aa17.58■□□□□ 0.41
HSPG2-202ENST00000374676 KIAA1107Q9UPP5 1409 aa17.57■□□□□ 0.4
HSPG2-202ENST00000374676 PPARGC1BQ86YN6 1023 aaKnown RBP17.57■□□□□ 0.4
HSPG2-202ENST00000374676 ABCC1P33527 1531 aa17.57■□□□□ 0.4
HSPG2-202ENST00000374676 RAPGEF3O95398 923 aa17.56■□□□□ 0.4
HSPG2-202ENST00000374676 ZNF644Q9H582 1327 aaPredicted RBP17.55■□□□□ 0.4
HSPG2-202ENST00000374676 ARHGEF12Q9NZN5 1544 aa17.55■□□□□ 0.4
HSPG2-202ENST00000374676 RICTORQ6R327 1708 aa17.55■□□□□ 0.4
HSPG2-202ENST00000374676 POGZQ7Z3K3 1410 aa17.54■□□□□ 0.4
HSPG2-202ENST00000374676 FGD6Q6ZV73 1430 aa17.53■□□□□ 0.4
HSPG2-202ENST00000374676 CAMSAP2Q08AD1 1489 aa17.52■□□□□ 0.4
HSPG2-202ENST00000374676 HNRNPMP52272 730 aaKnown RBP eCLIP17.52■□□□□ 0.4
HSPG2-202ENST00000374676 RSPH4AQ5TD94 716 aa17.52■□□□□ 0.4
HSPG2-202ENST00000374676 FRMPD1Q5SYB0 1578 aa17.52■□□□□ 0.39
HSPG2-202ENST00000374676 ZNF518AQ6AHZ1 1483 aa17.51■□□□□ 0.39
HSPG2-202ENST00000374676 MBD5Q9P267 1494 aa17.51■□□□□ 0.39
HSPG2-202ENST00000374676 AFAP1Q8N556 730 aa17.51■□□□□ 0.39
HSPG2-202ENST00000374676 SYCP2Q9BX26 1530 aa17.51■□□□□ 0.39
HSPG2-202ENST00000374676 TRAPPC8Q9Y2L5 1435 aa17.5■□□□□ 0.39
HSPG2-202ENST00000374676 PTPN23Q9H3S7 1636 aa17.5■□□□□ 0.39
HSPG2-202ENST00000374676 TCOF1Q13428 1488 aaKnown RBP17.5■□□□□ 0.39
HSPG2-202ENST00000374676 KDM5CP41229 1560 aa17.49■□□□□ 0.39
HSPG2-202ENST00000374676 ZMYM4Q5VZL5 1548 aa17.48■□□□□ 0.39
HSPG2-202ENST00000374676 MAGI2Q86UL8 1455 aa17.48■□□□□ 0.39
HSPG2-202ENST00000374676 ARHGEF5Q12774 1597 aa17.47■□□□□ 0.39
HSPG2-202ENST00000374676 MLH3Q9UHC1 1453 aa17.45■□□□□ 0.38
HSPG2-202ENST00000374676 CCDC141Q6ZP82 1450 aa17.44■□□□□ 0.38
HSPG2-202ENST00000374676 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.43■□□□□ 0.38
HSPG2-202ENST00000374676 SPAG9O60271 1321 aaKnown RBP17.43■□□□□ 0.38
HSPG2-202ENST00000374676 HECW2Q9P2P5 1572 aa17.42■□□□□ 0.38
HSPG2-202ENST00000374676 TSPY4P0CV99 314 aa17.42■□□□□ 0.38
HSPG2-202ENST00000374676 TSPY10P0CW01 314 aa17.42■□□□□ 0.38
HSPG2-202ENST00000374676 RRBP1Q9P2E9 1410 aaKnown RBP17.41■□□□□ 0.38
HSPG2-202ENST00000374676 FAM50AQ14320 339 aaKnown RBP17.41■□□□□ 0.38
HSPG2-202ENST00000374676 ZFYVE16Q7Z3T8 1539 aa17.41■□□□□ 0.38
HSPG2-202ENST00000374676 RTEL1-TNFRSF6BF6WH68 1400 aa17.4■□□□□ 0.38
HSPG2-202ENST00000374676 KIDINS220Q9ULH0 1771 aa17.4■□□□□ 0.38
HSPG2-202ENST00000374676 ARHGEF40Q8TER5 1519 aa17.39■□□□□ 0.37
HSPG2-202ENST00000374676 MYT1LQ9UL68 1186 aa17.39■□□□□ 0.37
HSPG2-202ENST00000374676 DNMT1P26358 1616 aaKnown RBP17.39■□□□□ 0.37
HSPG2-202ENST00000374676 ABCC5O15440 1437 aa17.38■□□□□ 0.37
HSPG2-202ENST00000374676 YEATS2Q9ULM3 1422 aa17.38■□□□□ 0.37
HSPG2-202ENST00000374676 INO80Q9ULG1 1556 aaPredicted RBP17.38■□□□□ 0.37
HSPG2-202ENST00000374676 ATP7AQ04656 1500 aa17.37■□□□□ 0.37
HSPG2-202ENST00000374676 MAST1Q9Y2H9 1570 aa17.37■□□□□ 0.37
HSPG2-202ENST00000374676 DAPK1P53355 1430 aa17.37■□□□□ 0.37
HSPG2-202ENST00000374676 ATP10AO60312 1499 aa17.37■□□□□ 0.37
HSPG2-202ENST00000374676 SHANK2Q9UPX8 1470 aa17.36■□□□□ 0.37
HSPG2-202ENST00000374676 DIP2CQ9Y2E4 1556 aa17.35■□□□□ 0.37
HSPG2-202ENST00000374676 CROCC2H7BZ55 1655 aa17.35■□□□□ 0.37
HSPG2-202ENST00000374676 C9orf84Q5VXU9 1444 aa17.34■□□□□ 0.37
HSPG2-202ENST00000374676 ABCA6Q8N139 1617 aa17.34■□□□□ 0.37
HSPG2-202ENST00000374676 REREQ9P2R6 1566 aa17.32■□□□□ 0.36
HSPG2-202ENST00000374676 ADGBQ8N7X0 1667 aa17.3■□□□□ 0.36
HSPG2-202ENST00000374676 PLXNC1O60486 1568 aa17.29■□□□□ 0.36
HSPG2-202ENST00000374676 PTPRKQ15262 1439 aa17.29■□□□□ 0.36
HSPG2-202ENST00000374676 DHX29Q7Z478 1369 aaKnown RBP17.28■□□□□ 0.36
HSPG2-202ENST00000374676 CHIC2Q9UKJ5 165 aa17.28■□□□□ 0.36
HSPG2-202ENST00000374676 ADGRL2O95490 1459 aa17.28■□□□□ 0.36
HSPG2-202ENST00000374676 A2MP01023 1474 aa17.28■□□□□ 0.36
HSPG2-202ENST00000374676 ANKRD30AQ9BXX3 1397 aa17.28■□□□□ 0.36
HSPG2-202ENST00000374676 AGLP35573 1532 aa17.27■□□□□ 0.36
HSPG2-202ENST00000374676 NCOA1Q15788 1441 aa17.27■□□□□ 0.35
HSPG2-202ENST00000374676 SIGLEC1Q9BZZ2 1709 aa17.26■□□□□ 0.35
HSPG2-202ENST00000374676 ARID4BQ4LE39 1312 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-202ENST00000374676 ITGAEP38570 1179 aa17.25■□□□□ 0.35
HSPG2-202ENST00000374676 ROCK1Q13464 1354 aa17.25■□□□□ 0.35
HSPG2-202ENST00000374676 KIF15Q9NS87 1388 aa17.24■□□□□ 0.35
HSPG2-202ENST00000374676 DUOX2Q9NRD8 1548 aa17.23■□□□□ 0.35
HSPG2-202ENST00000374676 RRP7BPQ9NSQ0 103 aa17.23■□□□□ 0.35
HSPG2-202ENST00000374676 BCORL1Q5H9F3 1711 aa17.21■□□□□ 0.35
HSPG2-202ENST00000374676 ERBINQ96RT1 1412 aa17.18■□□□□ 0.34
HSPG2-202ENST00000374676 EIF2AK4Q9P2K8 1649 aaKnown RBP17.18■□□□□ 0.34
HSPG2-202ENST00000374676 ADAMTSL3P82987 1691 aa17.17■□□□□ 0.34
HSPG2-202ENST00000374676 KIF3BO15066 747 aa17.17■□□□□ 0.34
HSPG2-202ENST00000374676 MLECQ14165 292 aa17.17■□□□□ 0.34
HSPG2-202ENST00000374676 KDM4FA0A1W2PPD8 638 aa17.16■□□□□ 0.34
HSPG2-202ENST00000374676 PPP6R1Q9UPN7 881 aa17.16■□□□□ 0.34
HSPG2-202ENST00000374676 ANKRD50Q9ULJ7 1429 aa17.15■□□□□ 0.34
HSPG2-202ENST00000374676 GGT6Q6P531 493 aa17.13■□□□□ 0.33
HSPG2-202ENST00000374676 RNF17Q9BXT8 1623 aaKnown RBP17.12■□□□□ 0.33
HSPG2-202ENST00000374676 HFM1A2PYH4 1435 aa17.12■□□□□ 0.33
HSPG2-202ENST00000374676 NAIPQ13075 1403 aa17.12■□□□□ 0.33
HSPG2-202ENST00000374676 MADDQ8WXG6 1647 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms