RNA–Protein interactions for RNA: ENST00000373668.7

COL16A1-202, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL16A1, Length 3,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-202ENST00000373668 ANP32CO43423 234 aa19.15■□□□□ 0.66
COL16A1-202ENST00000373668 NUP155O75694 1391 aa19.15■□□□□ 0.66
COL16A1-202ENST00000373668 ABCA5Q8WWZ7 1642 aa19.15■□□□□ 0.66
COL16A1-202ENST00000373668 RRBP1Q9P2E9 1410 aaKnown RBP19.14■□□□□ 0.66
COL16A1-202ENST00000373668 EFCAB5A4FU69 1503 aa19.13■□□□□ 0.65
COL16A1-202ENST00000373668 DCAF11Q8TEB1 546 aa19.12■□□□□ 0.65
COL16A1-202ENST00000373668 L3MBTL2Q969R5 705 aa19.12■□□□□ 0.65
COL16A1-202ENST00000373668 KIF3BO15066 747 aa19.11■□□□□ 0.65
COL16A1-202ENST00000373668 ADAMTS12P58397 1594 aa19.1■□□□□ 0.65
COL16A1-202ENST00000373668 NUTM2DQ5VT03 806 aaPredicted RBP19.08■□□□□ 0.65
COL16A1-202ENST00000373668 THOC2Q8NI27 1593 aaKnown RBP19.08■□□□□ 0.64
COL16A1-202ENST00000373668 PTPRKQ15262 1439 aa19.07■□□□□ 0.64
COL16A1-202ENST00000373668 ARHGEF11O15085 1522 aa19.06■□□□□ 0.64
COL16A1-202ENST00000373668 ARID4BQ4LE39 1312 aaPredicted RBP19.05■□□□□ 0.64
COL16A1-202ENST00000373668 PPP1R15AO75807 674 aaPredicted RBP19.05■□□□□ 0.64
COL16A1-202ENST00000373668 PBRM1Q86U86 1689 aa19.04■□□□□ 0.64
COL16A1-202ENST00000373668 SPAG9O60271 1321 aaKnown RBP19.04■□□□□ 0.64
COL16A1-202ENST00000373668 DISP1Q96F81 1524 aa19.03■□□□□ 0.64
COL16A1-202ENST00000373668 IRX6P78412 446 aaPredicted RBP19.03■□□□□ 0.64
COL16A1-202ENST00000373668 FAM69CQ0P6D2 419 aa19.03■□□□□ 0.64
COL16A1-202ENST00000373668 STAG3Q9UJ98 1225 aa19.02■□□□□ 0.64
COL16A1-202ENST00000373668 RAPGEF3O95398 923 aa19.02■□□□□ 0.64
COL16A1-202ENST00000373668 ANKRD30AQ9BXX3 1397 aa19.02■□□□□ 0.63
COL16A1-202ENST00000373668 NUP153P49790 1475 aaKnown RBP19.01■□□□□ 0.63
COL16A1-202ENST00000373668 TROQ12816 1431 aaPredicted RBP19.01■□□□□ 0.63
COL16A1-202ENST00000373668 EIF4G2P78344 907 aaKnown RBP eCLIP19■□□□□ 0.63
COL16A1-202ENST00000373668 ESF1Q9H501 851 aaKnown RBP18.99■□□□□ 0.63
COL16A1-202ENST00000373668 CTTNBP2Q8WZ74 1663 aa18.99■□□□□ 0.63
COL16A1-202ENST00000373668 UACAQ9BZF9 1416 aa18.99■□□□□ 0.63
COL16A1-202ENST00000373668 CEP170Q5SW79 1584 aa18.98■□□□□ 0.63
COL16A1-202ENST00000373668 SALL2Q9Y467 1007 aaPredicted RBP18.98■□□□□ 0.63
COL16A1-202ENST00000373668 RBM19Q9Y4C8 960 aaKnown RBP18.97■□□□□ 0.63
COL16A1-202ENST00000373668 CARD11Q9BXL7 1154 aa18.97■□□□□ 0.63
COL16A1-202ENST00000373668 ATP10BO94823 1461 aa18.97■□□□□ 0.63
COL16A1-202ENST00000373668 HSPA5P11021 654 aaKnown RBP18.96■□□□□ 0.63
COL16A1-202ENST00000373668 HNRNPUQ00839 825 aaKnown RBP eCLIP18.96■□□□□ 0.63
COL16A1-202ENST00000373668 FAM9BQ8IZU0 186 aa18.95■□□□□ 0.62
COL16A1-202ENST00000373668 HECW1Q76N89 1606 aa18.93■□□□□ 0.62
COL16A1-202ENST00000373668 KIF15Q9NS87 1388 aa18.93■□□□□ 0.62
COL16A1-202ENST00000373668 MAGI3Q5TCQ9 1506 aa18.92■□□□□ 0.62
COL16A1-202ENST00000373668 NAIPQ13075 1403 aa18.91■□□□□ 0.62
COL16A1-202ENST00000373668 SAFB2Q14151 953 aaKnown RBP eCLIP18.91■□□□□ 0.62
COL16A1-202ENST00000373668 NUP160Q12769 1436 aa18.91■□□□□ 0.62
COL16A1-202ENST00000373668 EHBP1L1Q8N3D4 1523 aa18.9■□□□□ 0.62
COL16A1-202ENST00000373668 ARHGAP5Q13017 1502 aa18.89■□□□□ 0.61
COL16A1-202ENST00000373668 KIAA0556O60303 1618 aa18.89■□□□□ 0.61
COL16A1-202ENST00000373668 ERCC6L2Q5T890 1561 aa18.88■□□□□ 0.61
COL16A1-202ENST00000373668 UGGT2Q9NYU1 1516 aa18.87■□□□□ 0.61
COL16A1-202ENST00000373668 ANKRD50Q9ULJ7 1429 aa18.87■□□□□ 0.61
COL16A1-202ENST00000373668 ABCC5O15440 1437 aa18.86■□□□□ 0.61
COL16A1-202ENST00000373668 SUPT6HQ7KZ85 1726 aaKnown RBP18.86■□□□□ 0.61
COL16A1-202ENST00000373668 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
COL16A1-202ENST00000373668 DAPK1P53355 1430 aa18.85■□□□□ 0.61
COL16A1-202ENST00000373668 SCAPERQ9BY12 1400 aa18.85■□□□□ 0.61
COL16A1-202ENST00000373668 PLEKHG5O94827 1062 aa18.83■□□□□ 0.61
COL16A1-202ENST00000373668 NBPF8Q3BBV2 869 aa18.82■□□□□ 0.6
COL16A1-202ENST00000373668 GPATCH8Q9UKJ3 1502 aaKnown RBP18.82■□□□□ 0.6
COL16A1-202ENST00000373668 WASHC2CQ9Y4E1 1318 aa18.82■□□□□ 0.6
COL16A1-202ENST00000373668 RAPGEF6Q8TEU7 1601 aa18.81■□□□□ 0.6
COL16A1-202ENST00000373668 PTPN23Q9H3S7 1636 aa18.81■□□□□ 0.6
COL16A1-202ENST00000373668 HFM1A2PYH4 1435 aa18.81■□□□□ 0.6
COL16A1-202ENST00000373668 C9orf84Q5VXU9 1444 aa18.8■□□□□ 0.6
COL16A1-202ENST00000373668 STK26Q9P289 416 aa18.79■□□□□ 0.6
COL16A1-202ENST00000373668 SAMD9Q5K651 1589 aa18.78■□□□□ 0.6
COL16A1-202ENST00000373668 RSPH4AQ5TD94 716 aa18.78■□□□□ 0.6
COL16A1-202ENST00000373668 CAMSAP2Q08AD1 1489 aa18.78■□□□□ 0.6
COL16A1-202ENST00000373668 MAP3K1Q13233 1512 aa18.77■□□□□ 0.6
COL16A1-202ENST00000373668 MIA2Q96PC5 1412 aa18.77■□□□□ 0.6
COL16A1-202ENST00000373668 CCER2I3L3R5 266 aa18.75■□□□□ 0.59
COL16A1-202ENST00000373668 TMC1Q8TDI8 760 aa18.75■□□□□ 0.59
COL16A1-202ENST00000373668 ST20-MTHFSA0A0A6YYL1 179 aa18.75■□□□□ 0.59
COL16A1-202ENST00000373668 MRS2Q9HD23 443 aa18.75■□□□□ 0.59
COL16A1-202ENST00000373668 PRKCSHP14314 528 aaPredicted RBP18.74■□□□□ 0.59
COL16A1-202ENST00000373668 NBPF1Q3BBV0 1214 aa18.73■□□□□ 0.59
COL16A1-202ENST00000373668 NCOA1Q15788 1441 aa18.72■□□□□ 0.59
COL16A1-202ENST00000373668 TNNT2P45379 298 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-202ENST00000373668 CC2D1BQ5T0F9 858 aaKnown RBP18.71■□□□□ 0.59
COL16A1-202ENST00000373668 CHD1O14646 1710 aa18.71■□□□□ 0.59
COL16A1-202ENST00000373668 KIF14Q15058 1648 aa18.7■□□□□ 0.58
COL16A1-202ENST00000373668 TIMELESSQ9UNS1 1208 aa18.68■□□□□ 0.58
COL16A1-202ENST00000373668 KANK1Q14678 1352 aa18.68■□□□□ 0.58
COL16A1-202ENST00000373668 ROCK2O75116 1388 aaKnown RBP18.66■□□□□ 0.58
COL16A1-202ENST00000373668 ASXL2Q76L83 1435 aa18.65■□□□□ 0.58
COL16A1-202ENST00000373668 TRAK1Q9UPV9 953 aa18.65■□□□□ 0.58
COL16A1-202ENST00000373668 CCDC144AA2RUR9 1427 aa18.65■□□□□ 0.58
COL16A1-202ENST00000373668 CD109Q6YHK3 1445 aa18.64■□□□□ 0.57
COL16A1-202ENST00000373668 CFAP43Q8NDM7 1665 aa18.64■□□□□ 0.57
COL16A1-202ENST00000373668 PLEKHH2Q8IVE3 1493 aa18.64■□□□□ 0.57
COL16A1-202ENST00000373668 C11orf95C9JLR9 678 aaPredicted RBP18.64■□□□□ 0.57
COL16A1-202ENST00000373668 TMEM132EQ6IEE7 984 aa18.64■□□□□ 0.57
COL16A1-202ENST00000373668 TRAPPC8Q9Y2L5 1435 aa18.63■□□□□ 0.57
COL16A1-202ENST00000373668 B4GALNT3Q6L9W6 998 aa18.63■□□□□ 0.57
COL16A1-202ENST00000373668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.63■□□□□ 0.57
COL16A1-202ENST00000373668 NUTM2FA1L443 756 aa18.62■□□□□ 0.57
COL16A1-202ENST00000373668 MAPKBP1O60336 1514 aa18.62■□□□□ 0.57
COL16A1-202ENST00000373668 NBR1Q14596 966 aa18.61■□□□□ 0.57
COL16A1-202ENST00000373668 AKNAQ7Z591 1439 aa18.61■□□□□ 0.57
COL16A1-202ENST00000373668 CFAP70Q5T0N1 1121 aa18.57■□□□□ 0.56
COL16A1-202ENST00000373668 WASHC2AQ641Q2 1341 aa18.57■□□□□ 0.56
COL16A1-202ENST00000373668 SYCP2Q9BX26 1530 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms