RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 PHLDB1Q86UU1 1377 aa28.68■■■□□ 2.18
PBX3-202ENST00000373482 CCNB3Q8WWL7 1395 aa28.64■■■□□ 2.18
PBX3-202ENST00000373482 NCOA2Q15596 1464 aa28.64■■■□□ 2.17
PBX3-202ENST00000373482 KANK4Q5T7N3 995 aaPredicted RBP28.63■■■□□ 2.17
PBX3-202ENST00000373482 EFCAB2Q5VUJ9 269 aa28.61■■■□□ 2.17
PBX3-202ENST00000373482 AKNAQ7Z591 1439 aa28.6■■■□□ 2.17
PBX3-202ENST00000373482 GPATCH8Q9UKJ3 1502 aaKnown RBP28.6■■■□□ 2.17
PBX3-202ENST00000373482 RICTORQ6R327 1708 aa28.56■■■□□ 2.16
PBX3-202ENST00000373482 ADGRL1O94910 1474 aa28.55■■■□□ 2.16
PBX3-202ENST00000373482 COL17A1Q9UMD9 1497 aaPredicted RBP28.54■■■□□ 2.16
PBX3-202ENST00000373482 SAMD9LQ8IVG5 1584 aa28.51■■■□□ 2.15
PBX3-202ENST00000373482 CFDP1Q9UEE9 299 aaPredicted RBP28.51■■■□□ 2.15
PBX3-202ENST00000373482 DENND4BO75064 1496 aaPredicted RBP28.5■■■□□ 2.15
PBX3-202ENST00000373482 ABCC1P33527 1531 aa28.48■■■□□ 2.15
PBX3-202ENST00000373482 SCAPERQ9BY12 1400 aa28.48■■■□□ 2.15
PBX3-202ENST00000373482 FRMPD1Q5SYB0 1578 aa28.47■■■□□ 2.15
PBX3-202ENST00000373482 ZNF777Q9ULD5 760 aaPredicted RBP28.47■■■□□ 2.15
PBX3-202ENST00000373482 PLEKHH2Q8IVE3 1493 aa28.44■■■□□ 2.14
PBX3-202ENST00000373482 MYOM3Q5VTT5 1437 aa28.43■■■□□ 2.14
PBX3-202ENST00000373482 RAPGEF3O95398 923 aa28.42■■■□□ 2.14
PBX3-202ENST00000373482 SYCP2Q9BX26 1530 aa28.41■■■□□ 2.14
PBX3-202ENST00000373482 POGZQ7Z3K3 1410 aa28.41■■■□□ 2.14
PBX3-202ENST00000373482 ZNF518AQ6AHZ1 1483 aa28.4■■■□□ 2.14
PBX3-202ENST00000373482 ZMYM4Q5VZL5 1548 aa28.38■■■□□ 2.13
PBX3-202ENST00000373482 MIA2Q96PC5 1412 aa28.38■■■□□ 2.13
PBX3-202ENST00000373482 CAMSAP2Q08AD1 1489 aa28.38■■■□□ 2.13
PBX3-202ENST00000373482 KIAA1107Q9UPP5 1409 aa28.36■■■□□ 2.13
PBX3-202ENST00000373482 ARHGEF12Q9NZN5 1544 aa28.36■■■□□ 2.13
PBX3-202ENST00000373482 KDM5CP41229 1560 aa28.35■■■□□ 2.13
PBX3-202ENST00000373482 PTPN23Q9H3S7 1636 aa28.35■■■□□ 2.13
PBX3-202ENST00000373482 HECW2Q9P2P5 1572 aa28.33■■■□□ 2.12
PBX3-202ENST00000373482 PPARGC1BQ86YN6 1023 aaKnown RBP28.32■■■□□ 2.12
PBX3-202ENST00000373482 ZNF644Q9H582 1327 aaPredicted RBP28.31■■■□□ 2.12
PBX3-202ENST00000373482 MAGI2Q86UL8 1455 aa28.3■■■□□ 2.12
PBX3-202ENST00000373482 TRAPPC8Q9Y2L5 1435 aa28.3■■■□□ 2.12
PBX3-202ENST00000373482 HNRNPMP52272 730 aaKnown RBP eCLIP28.3■■■□□ 2.12
PBX3-202ENST00000373482 FGD6Q6ZV73 1430 aa28.29■■■□□ 2.12
PBX3-202ENST00000373482 ZFYVE16Q7Z3T8 1539 aa28.28■■■□□ 2.12
PBX3-202ENST00000373482 ARHGEF40Q8TER5 1519 aa28.28■■■□□ 2.12
PBX3-202ENST00000373482 ARHGEF5Q12774 1597 aa28.28■■■□□ 2.12
PBX3-202ENST00000373482 AFAP1Q8N556 730 aa28.27■■■□□ 2.12
PBX3-202ENST00000373482 KIDINS220Q9ULH0 1771 aa28.26■■■□□ 2.11
PBX3-202ENST00000373482 MYT1LQ9UL68 1186 aa28.25■■■□□ 2.11
PBX3-202ENST00000373482 MBD5Q9P267 1494 aa28.25■■■□□ 2.11
PBX3-202ENST00000373482 CCDC141Q6ZP82 1450 aa28.23■■■□□ 2.11
PBX3-202ENST00000373482 RSPH4AQ5TD94 716 aa28.23■■■□□ 2.11
PBX3-202ENST00000373482 TCOF1Q13428 1488 aaKnown RBP28.22■■■□□ 2.11
PBX3-202ENST00000373482 MLH3Q9UHC1 1453 aa28.22■■■□□ 2.11
PBX3-202ENST00000373482 CROCC2H7BZ55 1655 aa28.22■■■□□ 2.11
PBX3-202ENST00000373482 INO80Q9ULG1 1556 aaPredicted RBP28.21■■■□□ 2.11
PBX3-202ENST00000373482 ATP7AQ04656 1500 aa28.19■■■□□ 2.1
PBX3-202ENST00000373482 ABCA6Q8N139 1617 aa28.19■■■□□ 2.1
PBX3-202ENST00000373482 SPAG9O60271 1321 aaKnown RBP28.18■■■□□ 2.1
PBX3-202ENST00000373482 DNMT1P26358 1616 aaKnown RBP28.18■■■□□ 2.1
PBX3-202ENST00000373482 YEATS2Q9ULM3 1422 aa28.18■■■□□ 2.1
PBX3-202ENST00000373482 DIP2CQ9Y2E4 1556 aa28.17■■■□□ 2.1
PBX3-202ENST00000373482 ADGBQ8N7X0 1667 aa28.16■■■□□ 2.1
PBX3-202ENST00000373482 ATP10AO60312 1499 aa28.13■■■□□ 2.09
PBX3-202ENST00000373482 MAST1Q9Y2H9 1570 aa28.12■■■□□ 2.09
PBX3-202ENST00000373482 TSPY4P0CV99 314 aa28.12■■■□□ 2.09
PBX3-202ENST00000373482 TSPY10P0CW01 314 aa28.12■■■□□ 2.09
PBX3-202ENST00000373482 RTEL1-TNFRSF6BF6WH68 1400 aa28.11■■■□□ 2.09
PBX3-202ENST00000373482 FAM50AQ14320 339 aaKnown RBP28.11■■■□□ 2.09
PBX3-202ENST00000373482 C9orf84Q5VXU9 1444 aa28.1■■■□□ 2.09
PBX3-202ENST00000373482 REREQ9P2R6 1566 aa28.09■■■□□ 2.09
PBX3-202ENST00000373482 SIGLEC1Q9BZZ2 1709 aa28.08■■■□□ 2.09
PBX3-202ENST00000373482 DAPK1P53355 1430 aa28.08■■■□□ 2.09
PBX3-202ENST00000373482 SHANK2Q9UPX8 1470 aa28.06■■■□□ 2.08
PBX3-202ENST00000373482 ABCC5O15440 1437 aa28.04■■■□□ 2.08
PBX3-202ENST00000373482 BCORL1Q5H9F3 1711 aa28.04■■■□□ 2.08
PBX3-202ENST00000373482 PLXNC1O60486 1568 aa28.03■■■□□ 2.08
PBX3-202ENST00000373482 RRBP1Q9P2E9 1410 aaKnown RBP28.03■■■□□ 2.08
PBX3-202ENST00000373482 ARID4BQ4LE39 1312 aaPredicted RBP28.03■■■□□ 2.08
PBX3-202ENST00000373482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.02■■■□□ 2.08
PBX3-202ENST00000373482 A2MP01023 1474 aa27.98■■■□□ 2.07
PBX3-202ENST00000373482 AGLP35573 1532 aa27.96■■■□□ 2.07
PBX3-202ENST00000373482 ADAMTSL3P82987 1691 aa27.94■■■□□ 2.06
PBX3-202ENST00000373482 FER1L4A9Z1Z3 1794 aa27.94■■■□□ 2.06
PBX3-202ENST00000373482 DHX29Q7Z478 1369 aaKnown RBP27.9■■■□□ 2.06
PBX3-202ENST00000373482 ANKRD30AQ9BXX3 1397 aa27.9■■■□□ 2.06
PBX3-202ENST00000373482 CHIC2Q9UKJ5 165 aa27.9■■■□□ 2.06
PBX3-202ENST00000373482 ADGRL2O95490 1459 aa27.89■■■□□ 2.06
PBX3-202ENST00000373482 EIF2AK4Q9P2K8 1649 aaKnown RBP27.89■■■□□ 2.06
PBX3-202ENST00000373482 DUOX2Q9NRD8 1548 aa27.89■■■□□ 2.06
PBX3-202ENST00000373482 ITGAEP38570 1179 aa27.87■■■□□ 2.05
PBX3-202ENST00000373482 MADDQ8WXG6 1647 aa27.87■■■□□ 2.05
PBX3-202ENST00000373482 KIF15Q9NS87 1388 aa27.86■■■□□ 2.05
PBX3-202ENST00000373482 RIMS1Q86UR5 1692 aaKnown RBP27.85■■■□□ 2.05
PBX3-202ENST00000373482 NCOA1Q15788 1441 aa27.84■■■□□ 2.05
PBX3-202ENST00000373482 MLECQ14165 292 aa27.84■■■□□ 2.05
PBX3-202ENST00000373482 KDM4FA0A1W2PPD8 638 aa27.83■■■□□ 2.05
PBX3-202ENST00000373482 RRP7BPQ9NSQ0 103 aa27.83■■■□□ 2.05
PBX3-202ENST00000373482 PTPRKQ15262 1439 aa27.83■■■□□ 2.05
PBX3-202ENST00000373482 ERBINQ96RT1 1412 aa27.79■■■□□ 2.04
PBX3-202ENST00000373482 ROCK1Q13464 1354 aa27.79■■■□□ 2.04
PBX3-202ENST00000373482 RNF17Q9BXT8 1623 aaKnown RBP27.78■■■□□ 2.04
PBX3-202ENST00000373482 KIF3BO15066 747 aa27.77■■■□□ 2.04
PBX3-202ENST00000373482 CLTCQ00610 1675 aaKnown RBP27.75■■■□□ 2.03
PBX3-202ENST00000373482 MROH2AA6NES4 1674 aa27.75■■■□□ 2.03
PBX3-202ENST00000373482 GCC2Q8IWJ2 1684 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms