RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 NUDCQ9Y266 331 aa23.98■■□□□ 1.43
VPS26A-202ENST00000373382 KDM6BO15054 1643 aa23.97■■□□□ 1.43
VPS26A-202ENST00000373382 MYT1LQ9UL68 1186 aa23.97■■□□□ 1.43
VPS26A-202ENST00000373382 SUPT6HQ7KZ85 1726 aaKnown RBP23.95■■□□□ 1.42
VPS26A-202ENST00000373382 GRIN2BQ13224 1484 aa23.94■■□□□ 1.42
VPS26A-202ENST00000373382 PRDM2Q13029 1718 aa23.94■■□□□ 1.42
VPS26A-202ENST00000373382 DNMBPQ6XZF7 1577 aa23.93■■□□□ 1.42
VPS26A-202ENST00000373382 KDM2AQ9Y2K7 1162 aa23.92■■□□□ 1.42
VPS26A-202ENST00000373382 MAGI3Q5TCQ9 1506 aa23.92■■□□□ 1.42
VPS26A-202ENST00000373382 EHBP1L1Q8N3D4 1523 aa23.91■■□□□ 1.42
VPS26A-202ENST00000373382 IPO9Q96P70 1041 aaKnown RBP23.91■■□□□ 1.42
VPS26A-202ENST00000373382 CTTNBP2Q8WZ74 1663 aa23.9■■□□□ 1.42
VPS26A-202ENST00000373382 ANKRD30BQ9BXX2 1392 aa23.88■■□□□ 1.41
VPS26A-202ENST00000373382 UGGT2Q9NYU1 1516 aa23.88■■□□□ 1.41
VPS26A-202ENST00000373382 GAPVD1Q14C86 1478 aa23.88■■□□□ 1.41
VPS26A-202ENST00000373382 CDK13Q14004 1512 aaKnown RBP23.87■■□□□ 1.41
VPS26A-202ENST00000373382 LAS1LQ9Y4W2 734 aaKnown RBP23.87■■□□□ 1.41
VPS26A-202ENST00000373382 CUL7Q14999 1698 aa23.86■■□□□ 1.41
VPS26A-202ENST00000373382 LRRIQ1Q96JM4 1722 aa23.85■■□□□ 1.41
VPS26A-202ENST00000373382 CC2D2AQ9P2K1 1620 aa23.85■■□□□ 1.41
VPS26A-202ENST00000373382 SMG6Q86US8 1419 aaKnown RBP23.83■■□□□ 1.41
VPS26A-202ENST00000373382 USP47Q96K76 1375 aa23.83■■□□□ 1.4
VPS26A-202ENST00000373382 RTN4Q9NQC3 1192 aaKnown RBP23.82■■□□□ 1.4
VPS26A-202ENST00000373382 PKD2Q13563 968 aa23.82■■□□□ 1.4
VPS26A-202ENST00000373382 PRKCSHP14314 528 aaPredicted RBP23.81■■□□□ 1.4
VPS26A-202ENST00000373382 EXOC6Q8TAG9 804 aa23.81■■□□□ 1.4
VPS26A-202ENST00000373382 CARD11Q9BXL7 1154 aa23.8■■□□□ 1.4
VPS26A-202ENST00000373382 RPRD2Q5VT52 1461 aaKnown RBP23.8■■□□□ 1.4
VPS26A-202ENST00000373382 PNISRQ8TF01 805 aaKnown RBP23.79■■□□□ 1.4
VPS26A-202ENST00000373382 EPRSP07814 1512 aaKnown RBP23.77■■□□□ 1.4
VPS26A-202ENST00000373382 URB2Q14146 1524 aaKnown RBP23.77■■□□□ 1.4
VPS26A-202ENST00000373382 HECW1Q76N89 1606 aa23.76■■□□□ 1.39
VPS26A-202ENST00000373382 CFDP1Q9UEE9 299 aaPredicted RBP23.75■■□□□ 1.39
VPS26A-202ENST00000373382 DHX29Q7Z478 1369 aaKnown RBP23.75■■□□□ 1.39
VPS26A-202ENST00000373382 SAMD9Q5K651 1589 aa23.75■■□□□ 1.39
VPS26A-202ENST00000373382 SPATA31E1Q6ZUB1 1445 aa23.75■■□□□ 1.39
VPS26A-202ENST00000373382 TCOF1Q13428 1488 aaKnown RBP23.74■■□□□ 1.39
VPS26A-202ENST00000373382 DNAJC5BQ9UF47 199 aa23.74■■□□□ 1.39
VPS26A-202ENST00000373382 SKAP1Q86WV1 359 aa23.73■■□□□ 1.39
VPS26A-202ENST00000373382 DAPK1P53355 1430 aa23.73■■□□□ 1.39
VPS26A-202ENST00000373382 ST20-MTHFSA0A0A6YYL1 179 aa23.72■■□□□ 1.39
VPS26A-202ENST00000373382 TEX14Q8IWB6 1497 aa23.72■■□□□ 1.39
VPS26A-202ENST00000373382 NEFMP07197 916 aa23.71■■□□□ 1.39
VPS26A-202ENST00000373382 ABCC5O15440 1437 aa23.7■■□□□ 1.39
VPS26A-202ENST00000373382 MIA2Q96PC5 1412 aa23.7■■□□□ 1.39
VPS26A-202ENST00000373382 PLIN1O60240 522 aa23.7■■□□□ 1.38
VPS26A-202ENST00000373382 THOC2Q8NI27 1593 aaKnown RBP23.7■■□□□ 1.38
VPS26A-202ENST00000373382 RCAN3Q9UKA8 241 aa23.69■■□□□ 1.38
VPS26A-202ENST00000373382 RRP1P56182 461 aaKnown RBP23.69■■□□□ 1.38
VPS26A-202ENST00000373382 GCC2Q8IWJ2 1684 aa23.68■■□□□ 1.38
VPS26A-202ENST00000373382 ARHGEF11O15085 1522 aa23.68■■□□□ 1.38
VPS26A-202ENST00000373382 IL27Q8NEV9 243 aa23.68■■□□□ 1.38
VPS26A-202ENST00000373382 DCAF11Q8TEB1 546 aa23.67■■□□□ 1.38
VPS26A-202ENST00000373382 PDE4AP27815 886 aa23.66■■□□□ 1.38
VPS26A-202ENST00000373382 RNF123Q5XPI4 1314 aa23.66■■□□□ 1.38
VPS26A-202ENST00000373382 CDCA7LQ96GN5 454 aa23.65■■□□□ 1.38
VPS26A-202ENST00000373382 ANO8Q9HCE9 1232 aaPredicted RBP23.63■■□□□ 1.37
VPS26A-202ENST00000373382 RGL3Q3MIN7 710 aa23.62■■□□□ 1.37
VPS26A-202ENST00000373382 CC2D1BQ5T0F9 858 aaKnown RBP23.61■■□□□ 1.37
VPS26A-202ENST00000373382 PDS5BQ9NTI5 1447 aa23.61■■□□□ 1.37
VPS26A-202ENST00000373382 ROCK1Q13464 1354 aa23.59■■□□□ 1.37
VPS26A-202ENST00000373382 LAMC3Q9Y6N6 1575 aa23.59■■□□□ 1.37
VPS26A-202ENST00000373382 FBLN2P98095 1184 aa23.59■■□□□ 1.37
VPS26A-202ENST00000373382 MYBBP1AQ9BQG0 1328 aaKnown RBP23.58■■□□□ 1.37
VPS26A-202ENST00000373382 KIF15Q9NS87 1388 aa23.58■■□□□ 1.37
VPS26A-202ENST00000373382 TCERG1O14776 1098 aaKnown RBP23.58■■□□□ 1.37
VPS26A-202ENST00000373382 NUP155O75694 1391 aa23.58■■□□□ 1.36
VPS26A-202ENST00000373382 SLC4A3P48751 1232 aa23.57■■□□□ 1.36
VPS26A-202ENST00000373382 PRG4Q92954 1404 aaPredicted RBP23.54■■□□□ 1.36
VPS26A-202ENST00000373382 ABCA5Q8WWZ7 1642 aa23.54■■□□□ 1.36
VPS26A-202ENST00000373382 KIAA1107Q9UPP5 1409 aa23.53■■□□□ 1.36
VPS26A-202ENST00000373382 BCORL1Q5H9F3 1711 aa23.53■■□□□ 1.36
VPS26A-202ENST00000373382 PZPP20742 1482 aa23.53■■□□□ 1.36
VPS26A-202ENST00000373382 RALBP1Q15311 655 aa23.52■■□□□ 1.36
VPS26A-202ENST00000373382 BACH2Q9BYV9 841 aa23.52■■□□□ 1.35
VPS26A-202ENST00000373382 IQGAP2Q13576 1575 aa23.51■■□□□ 1.35
VPS26A-202ENST00000373382 CRBNQ96SW2 442 aa23.5■■□□□ 1.35
VPS26A-202ENST00000373382 DAXXQ9UER7 740 aaPredicted RBP23.5■■□□□ 1.35
VPS26A-202ENST00000373382 ROCK2O75116 1388 aaKnown RBP23.49■■□□□ 1.35
VPS26A-202ENST00000373382 NLRP13Q86W25 1043 aa23.49■■□□□ 1.35
VPS26A-202ENST00000373382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.47■■□□□ 1.35
VPS26A-202ENST00000373382 BRD4O60885 1362 aaPredicted RBP23.47■■□□□ 1.35
VPS26A-202ENST00000373382 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.47■■□□□ 1.35
VPS26A-202ENST00000373382 TSPY4P0CV99 314 aa23.46■■□□□ 1.35
VPS26A-202ENST00000373382 TSPY10P0CW01 314 aa23.46■■□□□ 1.35
VPS26A-202ENST00000373382 WDR62O43379 1518 aa23.46■■□□□ 1.35
VPS26A-202ENST00000373382 ANKRD30AQ9BXX3 1397 aa23.46■■□□□ 1.35
VPS26A-202ENST00000373382 ARID4BQ4LE39 1312 aaPredicted RBP23.46■■□□□ 1.35
VPS26A-202ENST00000373382 KTN1Q86UP2 1357 aaKnown RBP23.44■■□□□ 1.34
VPS26A-202ENST00000373382 NBPF1Q3BBV0 1214 aa23.44■■□□□ 1.34
VPS26A-202ENST00000373382 ANKRD50Q9ULJ7 1429 aa23.44■■□□□ 1.34
VPS26A-202ENST00000373382 HNRNPMP52272 730 aaKnown RBP eCLIP23.42■■□□□ 1.342e-7■■■■■ 29.2
VPS26A-202ENST00000373382 C20orf194Q5TEA3 1177 aa23.42■■□□□ 1.34
VPS26A-202ENST00000373382 LRPPRCP42704 1394 aaKnown RBP23.42■■□□□ 1.34
VPS26A-202ENST00000373382 DNMT1P26358 1616 aaKnown RBP23.42■■□□□ 1.34
VPS26A-202ENST00000373382 CAMSAP2Q08AD1 1489 aa23.41■■□□□ 1.34
VPS26A-202ENST00000373382 PPM1GO15355 546 aaPredicted RBP23.4■■□□□ 1.34
VPS26A-202ENST00000373382 NUP153P49790 1475 aaKnown RBP23.4■■□□□ 1.34
VPS26A-202ENST00000373382 RGS3P49796 1198 aa23.37■■□□□ 1.33
VPS26A-202ENST00000373382 PANK3Q9H999 370 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms