RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 NISCHQ9Y2I1 1504 aa34.37■■■■□ 3.09
VPS26A-202ENST00000373382 SHROOM4Q9ULL8 1493 aa30.78■■■□□ 2.52
VPS26A-202ENST00000373382 SUPT5HO00267 1087 aaKnown RBP30.52■■■□□ 2.48
VPS26A-202ENST00000373382 DCAF8L2P0C7V8 631 aa29.67■■■□□ 2.34
VPS26A-202ENST00000373382 HRCP23327 699 aa29.58■■■□□ 2.33
VPS26A-202ENST00000373382 PCGF6Q9BYE7 350 aa29.58■■■□□ 2.33
VPS26A-202ENST00000373382 CHIC1Q5VXU3 224 aa29.48■■■□□ 2.31
VPS26A-202ENST00000373382 MYO15BQ96JP2 1530 aa29.4■■■□□ 2.3
VPS26A-202ENST00000373382 PPARGC1BQ86YN6 1023 aaKnown RBP29.33■■■□□ 2.29
VPS26A-202ENST00000373382 ZCCHC6Q5VYS8 1495 aaKnown RBP29.08■■■□□ 2.25
VPS26A-202ENST00000373382 LOC105371045A0A1W2PR82 267 aa29.01■■■□□ 2.24
VPS26A-202ENST00000373382 TRIM26Q12899 539 aaPredicted RBP28.47■■■□□ 2.15
VPS26A-202ENST00000373382 EHMT2Q96KQ7 1210 aa28.47■■■□□ 2.15
VPS26A-202ENST00000373382 CCDC180Q9P1Z9 1646 aa28.45■■■□□ 2.14
VPS26A-202ENST00000373382 DCAF1Q9Y4B6 1507 aa28.42■■■□□ 2.14
VPS26A-202ENST00000373382 FAM9AQ8IZU1 332 aaPredicted RBP28.35■■■□□ 2.13
VPS26A-202ENST00000373382 TRIM41Q8WV44 630 aa28.11■■■□□ 2.09
VPS26A-202ENST00000373382 ZEB1P37275 1124 aaPredicted RBP27.97■■■□□ 2.07
VPS26A-202ENST00000373382 SCAF1Q9H7N4 1312 aaKnown RBP27.79■■■□□ 2.04
VPS26A-202ENST00000373382 RSF1Q96T23 1441 aaPredicted RBP27.63■■■□□ 2.01
VPS26A-202ENST00000373382 TTBK1Q5TCY1 1321 aaPredicted RBP27.62■■■□□ 2.01
VPS26A-202ENST00000373382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.61■■■□□ 2.01
VPS26A-202ENST00000373382 PELP1Q8IZL8 1130 aaKnown RBP27.6■■■□□ 2.01
VPS26A-202ENST00000373382 CCER1Q8TC90 406 aaPredicted RBP27.53■■■□□ 2
VPS26A-202ENST00000373382 SCRIBQ14160 1630 aa27.53■■■□□ 2
VPS26A-202ENST00000373382 ABCC9O60706 1549 aa27.5■■□□□ 1.99
VPS26A-202ENST00000373382 RB1CC1Q8TDY2 1594 aa27.42■■□□□ 1.98
VPS26A-202ENST00000373382 NEUROD1Q13562 356 aa27.29■■□□□ 1.96
VPS26A-202ENST00000373382 ACIN1Q9UKV3 1341 aaKnown RBP27.24■■□□□ 1.95
VPS26A-202ENST00000373382 DIEXFQ68CQ4 756 aaKnown RBP27.18■■□□□ 1.94
VPS26A-202ENST00000373382 GTF3C3Q9Y5Q9 886 aa27.16■■□□□ 1.94
VPS26A-202ENST00000373382 CECR2Q9BXF3 1484 aa27.12■■□□□ 1.93
VPS26A-202ENST00000373382 CENPBP07199 599 aaPredicted RBP27.07■■□□□ 1.92
VPS26A-202ENST00000373382 YTHDC1Q96MU7 727 aaKnown RBP27.02■■□□□ 1.92
VPS26A-202ENST00000373382 MROH2BQ7Z745 1585 aa26.94■■□□□ 1.9
VPS26A-202ENST00000373382 UBTFP17480 764 aaKnown RBP26.86■■□□□ 1.89
VPS26A-202ENST00000373382 WIZO95785 1651 aa26.8■■□□□ 1.88
VPS26A-202ENST00000373382 HNRNPUL2Q1KMD3 747 aaKnown RBP26.72■■□□□ 1.87
VPS26A-202ENST00000373382 ZNF316A6NFI3 1004 aaPredicted RBP26.69■■□□□ 1.86
VPS26A-202ENST00000373382 RANGAP1P46060 587 aaPredicted RBP26.64■■□□□ 1.86
VPS26A-202ENST00000373382 CEP162Q5TB80 1403 aa26.64■■□□□ 1.86
VPS26A-202ENST00000373382 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
VPS26A-202ENST00000373382 CCDC88BA6NC98 1476 aa26.61■■□□□ 1.85
VPS26A-202ENST00000373382 SOGA1O94964 1423 aa26.58■■□□□ 1.84
VPS26A-202ENST00000373382 MIER1Q8N108 512 aa26.55■■□□□ 1.84
VPS26A-202ENST00000373382 CSRNP3Q8WYN3 585 aa26.54■■□□□ 1.84
VPS26A-202ENST00000373382 NACADO15069 1562 aa26.42■■□□□ 1.82
VPS26A-202ENST00000373382 RUSC2Q8N2Y8 1516 aa26.41■■□□□ 1.82
VPS26A-202ENST00000373382 WRNQ14191 1432 aaPredicted RBP eCLIP26.4■■□□□ 1.82
VPS26A-202ENST00000373382 TNIKQ9UKE5 1360 aa26.39■■□□□ 1.82
VPS26A-202ENST00000373382 BAZ1AQ9NRL2 1556 aaPredicted RBP26.38■■□□□ 1.81
VPS26A-202ENST00000373382 APLP2Q06481 763 aa26.35■■□□□ 1.81
VPS26A-202ENST00000373382 MYT1Q01538 1121 aa26.27■■□□□ 1.8
VPS26A-202ENST00000373382 EIF4G1Q04637 1599 aaKnown RBP26.23■■□□□ 1.79
VPS26A-202ENST00000373382 PABPN1Q86U42 306 aaKnown RBP eCLIP26.19■■□□□ 1.78
VPS26A-202ENST00000373382 TOP2AP11388 1531 aaKnown RBP26.15■■□□□ 1.78
VPS26A-202ENST00000373382 GOLGA3Q08378 1498 aa26.14■■□□□ 1.78
VPS26A-202ENST00000373382 SMARCA2P51531 1590 aa26.1■■□□□ 1.77
VPS26A-202ENST00000373382 EEA1Q15075 1411 aa26.07■■□□□ 1.76
VPS26A-202ENST00000373382 CLIP1P30622 1438 aa26.06■■□□□ 1.76
VPS26A-202ENST00000373382 SMARCA4P51532 1647 aa25.99■■□□□ 1.75
VPS26A-202ENST00000373382 ITGAEP38570 1179 aa25.95■■□□□ 1.75
VPS26A-202ENST00000373382 CEP164Q9UPV0 1460 aa25.89■■□□□ 1.74
VPS26A-202ENST00000373382 VPS8Q8N3P4 1428 aa25.85■■□□□ 1.73
VPS26A-202ENST00000373382 SUPT16HQ9Y5B9 1047 aaKnown RBP25.84■■□□□ 1.73
VPS26A-202ENST00000373382 RAPGEF2Q9Y4G8 1499 aa25.8■■□□□ 1.72
VPS26A-202ENST00000373382 BCANQ96GW7 911 aa25.76■■□□□ 1.72
VPS26A-202ENST00000373382 KANK4Q5T7N3 995 aaPredicted RBP25.75■■□□□ 1.71
VPS26A-202ENST00000373382 SYNJ1O43426 1573 aa25.71■■□□□ 1.71
VPS26A-202ENST00000373382 DHX57Q6P158 1386 aaKnown RBP25.69■■□□□ 1.7
VPS26A-202ENST00000373382 KCNH8Q96L42 1107 aa25.69■■□□□ 1.7
VPS26A-202ENST00000373382 KIF21BO75037 1637 aa25.6■■□□□ 1.69
VPS26A-202ENST00000373382 TSHZ2Q9NRE2 1034 aa25.57■■□□□ 1.68
VPS26A-202ENST00000373382 CLSPNQ9HAW4 1339 aa25.52■■□□□ 1.68
VPS26A-202ENST00000373382 DDX10Q13206 875 aaKnown RBP25.5■■□□□ 1.67
VPS26A-202ENST00000373382 HIRIP3Q9BW71 556 aaPredicted RBP25.48■■□□□ 1.67
VPS26A-202ENST00000373382 BAZ1BQ9UIG0 1483 aaKnown RBP25.48■■□□□ 1.67
VPS26A-202ENST00000373382 FKBP8Q14318 412 aa25.46■■□□□ 1.67
VPS26A-202ENST00000373382 UNC13AQ9UPW8 1703 aa25.46■■□□□ 1.67
VPS26A-202ENST00000373382 ATP1B4Q9UN42 357 aaPredicted RBP25.46■■□□□ 1.67
VPS26A-202ENST00000373382 SIN3AQ96ST3 1273 aa25.38■■□□□ 1.65
VPS26A-202ENST00000373382 FAM50AQ14320 339 aaKnown RBP25.38■■□□□ 1.65
VPS26A-202ENST00000373382 CCNB3Q8WWL7 1395 aa25.36■■□□□ 1.65
VPS26A-202ENST00000373382 ARAP1Q96P48 1450 aa25.35■■□□□ 1.65
VPS26A-202ENST00000373382 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
VPS26A-202ENST00000373382 TRIM52Q96A61 297 aa25.35■■□□□ 1.65
VPS26A-202ENST00000373382 ANP32EQ9BTT0 268 aa25.35■■□□□ 1.65
VPS26A-202ENST00000373382 NEFLP07196 543 aa25.29■■□□□ 1.64
VPS26A-202ENST00000373382 RAB3GAP2Q9H2M9 1393 aa25.28■■□□□ 1.64
VPS26A-202ENST00000373382 P3H3Q8IVL6 736 aa25.28■■□□□ 1.64
VPS26A-202ENST00000373382 BICRAQ9NZM4 1560 aa25.25■■□□□ 1.63
VPS26A-202ENST00000373382 RRBP1Q9P2E9 1410 aaKnown RBP25.21■■□□□ 1.63
VPS26A-202ENST00000373382 PRXQ9BXM0 1461 aa25.19■■□□□ 1.62
VPS26A-202ENST00000373382 TOP2BQ02880 1626 aa25.15■■□□□ 1.62
VPS26A-202ENST00000373382 KIF27Q86VH2 1401 aa25.14■■□□□ 1.62
VPS26A-202ENST00000373382 PEG3Q9GZU2 1588 aa25.13■■□□□ 1.61
VPS26A-202ENST00000373382 ANP32CO43423 234 aa25.12■■□□□ 1.61
VPS26A-202ENST00000373382 RBM19Q9Y4C8 960 aaKnown RBP25.08■■□□□ 1.61
VPS26A-202ENST00000373382 ARHGAP35Q9NRY4 1499 aa25.08■■□□□ 1.61
VPS26A-202ENST00000373382 ERICH3Q5RHP9 1530 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms