RNA–Protein interactions for RNA: ENST00000373104.5

CSF3R-204, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF3R, Length 2,953 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-204ENST00000373104 DENND4BO75064 1496 aaPredicted RBP16.71■□□□□ 0.27
CSF3R-204ENST00000373104 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
CSF3R-204ENST00000373104 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
CSF3R-204ENST00000373104 EFCAB5A4FU69 1503 aa16.68■□□□□ 0.26
CSF3R-204ENST00000373104 CADPSQ9ULU8 1353 aa16.68■□□□□ 0.26
CSF3R-204ENST00000373104 TCERG1O14776 1098 aaKnown RBP16.67■□□□□ 0.26
CSF3R-204ENST00000373104 PNISRQ8TF01 805 aaKnown RBP16.67■□□□□ 0.26
CSF3R-204ENST00000373104 SNAPC4Q5SXM2 1469 aa16.66■□□□□ 0.26
CSF3R-204ENST00000373104 RRP1P56182 461 aaKnown RBP16.66■□□□□ 0.26
CSF3R-204ENST00000373104 USP35Q9P2H5 1018 aa16.66■□□□□ 0.26
CSF3R-204ENST00000373104 BRPF3Q9ULD4 1205 aa16.65■□□□□ 0.26
CSF3R-204ENST00000373104 SKAP1Q86WV1 359 aa16.65■□□□□ 0.26
CSF3R-204ENST00000373104 PPM1GO15355 546 aaPredicted RBP16.65■□□□□ 0.26
CSF3R-204ENST00000373104 EIF5BO60841 1220 aaKnown RBP16.65■□□□□ 0.26
CSF3R-204ENST00000373104 BACH2Q9BYV9 841 aa16.64■□□□□ 0.25
CSF3R-204ENST00000373104 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
CSF3R-204ENST00000373104 DHX29Q7Z478 1369 aaKnown RBP16.63■□□□□ 0.25
CSF3R-204ENST00000373104 KDM6BO15054 1643 aa16.62■□□□□ 0.25
CSF3R-204ENST00000373104 SLC4A3P48751 1232 aa16.62■□□□□ 0.25
CSF3R-204ENST00000373104 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
CSF3R-204ENST00000373104 ANKRD30BQ9BXX2 1392 aa16.61■□□□□ 0.25
CSF3R-204ENST00000373104 PLIN1O60240 522 aa16.59■□□□□ 0.25
CSF3R-204ENST00000373104 DAXXQ9UER7 740 aaPredicted RBP16.59■□□□□ 0.25
CSF3R-204ENST00000373104 USP47Q96K76 1375 aa16.59■□□□□ 0.25
CSF3R-204ENST00000373104 SUPT6HQ7KZ85 1726 aaKnown RBP16.58■□□□□ 0.24
CSF3R-204ENST00000373104 RPRD2Q5VT52 1461 aaKnown RBP16.58■□□□□ 0.24
CSF3R-204ENST00000373104 GSE1Q14687 1217 aa16.57■□□□□ 0.24
CSF3R-204ENST00000373104 HECW1Q76N89 1606 aa16.56■□□□□ 0.24
CSF3R-204ENST00000373104 WASHC2CQ9Y4E1 1318 aa16.56■□□□□ 0.24
CSF3R-204ENST00000373104 EHBP1L1Q8N3D4 1523 aa16.55■□□□□ 0.24
CSF3R-204ENST00000373104 NFKBIBQ15653 356 aa16.54■□□□□ 0.24
CSF3R-204ENST00000373104 TEX14Q8IWB6 1497 aa16.54■□□□□ 0.24
CSF3R-204ENST00000373104 MS4A1P11836 297 aa16.54■□□□□ 0.24
CSF3R-204ENST00000373104 CDCA7LQ96GN5 454 aa16.54■□□□□ 0.24
CSF3R-204ENST00000373104 GRIN2BQ13224 1484 aa16.53■□□□□ 0.24
CSF3R-204ENST00000373104 UGGT2Q9NYU1 1516 aa16.53■□□□□ 0.24
CSF3R-204ENST00000373104 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
CSF3R-204ENST00000373104 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
CSF3R-204ENST00000373104 ZNF644Q9H582 1327 aaPredicted RBP16.53■□□□□ 0.24
CSF3R-204ENST00000373104 FANCD2Q9BXW9 1451 aa16.52■□□□□ 0.24
CSF3R-204ENST00000373104 CARD11Q9BXL7 1154 aa16.52■□□□□ 0.24
CSF3R-204ENST00000373104 MAGI3Q5TCQ9 1506 aa16.52■□□□□ 0.23
CSF3R-204ENST00000373104 FRAT1Q92837 279 aaPredicted RBP16.52■□□□□ 0.23
CSF3R-204ENST00000373104 KDM2AQ9Y2K7 1162 aa16.52■□□□□ 0.23
CSF3R-204ENST00000373104 POLA1P09884 1462 aaPredicted RBP16.51■□□□□ 0.23
CSF3R-204ENST00000373104 MIA2Q96PC5 1412 aa16.5■□□□□ 0.23
CSF3R-204ENST00000373104 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
CSF3R-204ENST00000373104 LRRIQ1Q96JM4 1722 aa16.49■□□□□ 0.23
CSF3R-204ENST00000373104 MYBBP1AQ9BQG0 1328 aaKnown RBP16.49■□□□□ 0.23
CSF3R-204ENST00000373104 CRBNQ96SW2 442 aa16.48■□□□□ 0.23
CSF3R-204ENST00000373104 CTTNBP2Q8WZ74 1663 aa16.48■□□□□ 0.23
CSF3R-204ENST00000373104 ST20-MTHFSA0A0A6YYL1 179 aa16.48■□□□□ 0.23
CSF3R-204ENST00000373104 GCC2Q8IWJ2 1684 aa16.48■□□□□ 0.23
CSF3R-204ENST00000373104 KIF15Q9NS87 1388 aa16.48■□□□□ 0.23
CSF3R-204ENST00000373104 TCOF1Q13428 1488 aaKnown RBP16.47■□□□□ 0.23
CSF3R-204ENST00000373104 PKD2Q13563 968 aa16.46■□□□□ 0.23
CSF3R-204ENST00000373104 RALBP1Q15311 655 aa16.45■□□□□ 0.22
CSF3R-204ENST00000373104 BRD4O60885 1362 aaPredicted RBP16.44■□□□□ 0.22
CSF3R-204ENST00000373104 LRPPRCP42704 1394 aaKnown RBP16.44■□□□□ 0.22
CSF3R-204ENST00000373104 ZNF777Q9ULD5 760 aaPredicted RBP16.44■□□□□ 0.22
CSF3R-204ENST00000373104 ABCA5Q8WWZ7 1642 aa16.44■□□□□ 0.22
CSF3R-204ENST00000373104 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
CSF3R-204ENST00000373104 ROCK2O75116 1388 aaKnown RBP16.43■□□□□ 0.22
CSF3R-204ENST00000373104 BCORL1Q5H9F3 1711 aa16.43■□□□□ 0.22
CSF3R-204ENST00000373104 ARHGEF11O15085 1522 aa16.43■□□□□ 0.22
CSF3R-204ENST00000373104 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
CSF3R-204ENST00000373104 ARID4BQ4LE39 1312 aaPredicted RBP16.42■□□□□ 0.22
CSF3R-204ENST00000373104 CUL7Q14999 1698 aa16.42■□□□□ 0.22
CSF3R-204ENST00000373104 PDE3BQ13370 1112 aa16.42■□□□□ 0.22
CSF3R-204ENST00000373104 CC2D2AQ9P2K1 1620 aa16.42■□□□□ 0.22
CSF3R-204ENST00000373104 DAPK1P53355 1430 aa16.42■□□□□ 0.22
CSF3R-204ENST00000373104 CDK13Q14004 1512 aaKnown RBP16.41■□□□□ 0.22
CSF3R-204ENST00000373104 FRAT2O75474 233 aaPredicted RBP16.41■□□□□ 0.22
CSF3R-204ENST00000373104 NLRP13Q86W25 1043 aa16.41■□□□□ 0.22
CSF3R-204ENST00000373104 UBE2Q2Q8WVN8 375 aa16.41■□□□□ 0.22
CSF3R-204ENST00000373104 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
CSF3R-204ENST00000373104 CC2D1BQ5T0F9 858 aaKnown RBP16.41■□□□□ 0.22
CSF3R-204ENST00000373104 RGS3P49796 1198 aa16.4■□□□□ 0.22
CSF3R-204ENST00000373104 ABCC5O15440 1437 aa16.39■□□□□ 0.21
CSF3R-204ENST00000373104 SAMD9Q5K651 1589 aa16.39■□□□□ 0.21
CSF3R-204ENST00000373104 EPRSP07814 1512 aaKnown RBP16.38■□□□□ 0.21
CSF3R-204ENST00000373104 DCAF11Q8TEB1 546 aa16.38■□□□□ 0.21
CSF3R-204ENST00000373104 DNMBPQ6XZF7 1577 aa16.38■□□□□ 0.21
CSF3R-204ENST00000373104 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
CSF3R-204ENST00000373104 ROCK1Q13464 1354 aa16.37■□□□□ 0.21
CSF3R-204ENST00000373104 POLR1AO95602 1720 aaPredicted RBP16.37■□□□□ 0.21
CSF3R-204ENST00000373104 KTN1Q86UP2 1357 aaKnown RBP16.35■□□□□ 0.21
CSF3R-204ENST00000373104 FAM161AQ3B820 660 aa16.34■□□□□ 0.21
CSF3R-204ENST00000373104 CFDP1Q9UEE9 299 aaPredicted RBP16.34■□□□□ 0.21
CSF3R-204ENST00000373104 GAPVD1Q14C86 1478 aa16.33■□□□□ 0.21
CSF3R-204ENST00000373104 NESP48681 1621 aa16.33■□□□□ 0.21
CSF3R-204ENST00000373104 KIAA1107Q9UPP5 1409 aa16.32■□□□□ 0.2
CSF3R-204ENST00000373104 PZPP20742 1482 aa16.32■□□□□ 0.2
CSF3R-204ENST00000373104 ARXQ96QS3 562 aa16.32■□□□□ 0.2
CSF3R-204ENST00000373104 C8orf34Q49A92 452 aa16.3■□□□□ 0.2
CSF3R-204ENST00000373104 KDM5CP41229 1560 aa16.3■□□□□ 0.2
CSF3R-204ENST00000373104 CENPQQ7L2Z9 268 aaPredicted RBP16.3■□□□□ 0.2
CSF3R-204ENST00000373104 MBD5Q9P267 1494 aa16.29■□□□□ 0.2
CSF3R-204ENST00000373104 RGL3Q3MIN7 710 aa16.28■□□□□ 0.2
CSF3R-204ENST00000373104 NUP155O75694 1391 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms