RNA–Protein interactions for RNA: ENST00000372771.4

RLF-201, Transcript of rearranged L-myc fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLF, Length 6,246 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLF-201ENST00000372771 FHOD3Q2V2M9 1422 aa19.15■□□□□ 0.66
RLF-201ENST00000372771 PTMAP06454 111 aaKnown RBP19.14■□□□□ 0.65
RLF-201ENST00000372771 HSP90AB1P08238 724 aaKnown RBP19.14■□□□□ 0.65
RLF-201ENST00000372771 KTN1Q86UP2 1357 aaKnown RBP19.14■□□□□ 0.65
RLF-201ENST00000372771 RAPGEF2Q9Y4G8 1499 aa19.14■□□□□ 0.65
RLF-201ENST00000372771 NUP155O75694 1391 aa19.13■□□□□ 0.65
RLF-201ENST00000372771 OS9Q13438 667 aaPredicted RBP19.12■□□□□ 0.65
RLF-201ENST00000372771 RUSC2Q8N2Y8 1516 aa19.1■□□□□ 0.65
RLF-201ENST00000372771 FMN1Q68DA7 1419 aa19.1■□□□□ 0.65
RLF-201ENST00000372771 HNRNPMP52272 730 aaKnown RBP eCLIP19.08■□□□□ 0.656e-6■■□□□ 13.2
RLF-201ENST00000372771 L3MBTL2Q969R5 705 aa19.08■□□□□ 0.65
RLF-201ENST00000372771 PLCB2Q00722 1185 aa19.07■□□□□ 0.64
RLF-201ENST00000372771 MS4A1P11836 297 aa19.07■□□□□ 0.64
RLF-201ENST00000372771 PNNQ9H307 717 aaKnown RBP19.06■□□□□ 0.64
RLF-201ENST00000372771 RCAN3Q9UKA8 241 aa19.06■□□□□ 0.64
RLF-201ENST00000372771 CARMIL2Q6F5E8 1435 aa19.06■□□□□ 0.64
RLF-201ENST00000372771 DNTTIP2Q5QJE6 756 aaKnown RBP19.05■□□□□ 0.64
RLF-201ENST00000372771 APBB1O00213 710 aa19.05■□□□□ 0.64
RLF-201ENST00000372771 ZRSR1Q15695 479 aaKnown RBP19.04■□□□□ 0.64
RLF-201ENST00000372771 NUTM2DQ5VT03 806 aaPredicted RBP19.03■□□□□ 0.64
RLF-201ENST00000372771 PDS5BQ9NTI5 1447 aa19.03■□□□□ 0.64
RLF-201ENST00000372771 ANKRD30AQ9BXX3 1397 aa19.03■□□□□ 0.64
RLF-201ENST00000372771 CHMP4BQ9H444 224 aaKnown RBP19.02■□□□□ 0.63
RLF-201ENST00000372771 U2AF1L5P0DN76 240 aaPredicted RBP19.01■□□□□ 0.63
RLF-201ENST00000372771 U2AF1Q01081 240 aaKnown RBP eCLIP19.01■□□□□ 0.632e-8■■□□□ 11.7
RLF-201ENST00000372771 HSCBQ8IWL3 235 aa19.01■□□□□ 0.63
RLF-201ENST00000372771 NAP1L2Q9ULW6 460 aaPredicted RBP19.01■□□□□ 0.63
RLF-201ENST00000372771 NAP1L5Q96NT1 182 aaPredicted RBP19.01■□□□□ 0.63
RLF-201ENST00000372771 KCNJ4P48050 445 aa19.01■□□□□ 0.63
RLF-201ENST00000372771 CCDC146Q8IYE0 955 aa19.01■□□□□ 0.63
RLF-201ENST00000372771 RALBP1Q15311 655 aa18.99■□□□□ 0.63
RLF-201ENST00000372771 CDK11BP21127 795 aaKnown RBP18.99■□□□□ 0.63
RLF-201ENST00000372771 DEKP35659 375 aaKnown RBP18.98■□□□□ 0.63
RLF-201ENST00000372771 FGD1P98174 961 aa18.98■□□□□ 0.63
RLF-201ENST00000372771 TULP1O00294 542 aaPredicted RBP18.97■□□□□ 0.63
RLF-201ENST00000372771 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
RLF-201ENST00000372771 HDGFL2Q7Z4V5 671 aaPredicted RBP18.97■□□□□ 0.63
RLF-201ENST00000372771 DHX57Q6P158 1386 aaKnown RBP18.96■□□□□ 0.63
RLF-201ENST00000372771 ITPRIPQ8IWB1 547 aa18.96■□□□□ 0.63
RLF-201ENST00000372771 KIF3BO15066 747 aa18.96■□□□□ 0.63
RLF-201ENST00000372771 TSHZ2Q9NRE2 1034 aa18.96■□□□□ 0.63
RLF-201ENST00000372771 ERICH6BQ5W0A0 696 aa18.96■□□□□ 0.63
RLF-201ENST00000372771 EFCAB2Q5VUJ9 269 aa18.95■□□□□ 0.62
RLF-201ENST00000372771 RTF1Q92541 710 aaKnown RBP18.95■□□□□ 0.62
RLF-201ENST00000372771 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
RLF-201ENST00000372771 PAK3O75914 559 aaPredicted RBP18.93■□□□□ 0.62
RLF-201ENST00000372771 NPHP1O15259 732 aa18.93■□□□□ 0.62
RLF-201ENST00000372771 HDGFP51858 240 aaKnown RBP18.92■□□□□ 0.62
RLF-201ENST00000372771 SMARCA4P51532 1647 aa18.91■□□□□ 0.62
RLF-201ENST00000372771 SLKQ9H2G2 1235 aaPredicted RBP18.9■□□□□ 0.62
RLF-201ENST00000372771 ATAD2BQ9ULI0 1458 aa18.89■□□□□ 0.61
RLF-201ENST00000372771 CLUAP1Q96AJ1 413 aa18.89■□□□□ 0.61
RLF-201ENST00000372771 CCDC18Q5T9S5 1454 aa18.88■□□□□ 0.61
RLF-201ENST00000372771 IPO8O15397 1037 aaKnown RBP18.87■□□□□ 0.61
RLF-201ENST00000372771 ST20-MTHFSA0A0A6YYL1 179 aa18.86■□□□□ 0.61
RLF-201ENST00000372771 GZF1Q9H116 711 aaPredicted RBP18.86■□□□□ 0.61
RLF-201ENST00000372771 EIF3AQ14152 1382 aaKnown RBP18.85■□□□□ 0.61
RLF-201ENST00000372771 GOLGA2Q08379 1002 aa18.85■□□□□ 0.61
RLF-201ENST00000372771 SMC4Q9NTJ3 1288 aa18.85■□□□□ 0.61
RLF-201ENST00000372771 RWDD1Q9H446 243 aaPredicted RBP18.84■□□□□ 0.61
RLF-201ENST00000372771 MCCP23508 829 aa18.84■□□□□ 0.61
RLF-201ENST00000372771 TCERG1O14776 1098 aaKnown RBP18.84■□□□□ 0.61
RLF-201ENST00000372771 RRP7AQ9Y3A4 280 aaKnown RBP18.84■□□□□ 0.61
RLF-201ENST00000372771 SPAG9O60271 1321 aaKnown RBP18.84■□□□□ 0.61
RLF-201ENST00000372771 MFAP1P55081 439 aaKnown RBP18.83■□□□□ 0.61
RLF-201ENST00000372771 TRAK1Q9UPV9 953 aa18.83■□□□□ 0.61
RLF-201ENST00000372771 NLRP13Q86W25 1043 aa18.83■□□□□ 0.6
RLF-201ENST00000372771 GOLGA6L4A6NEF3 574 aa18.82■□□□□ 0.6
RLF-201ENST00000372771 JPH4Q96JJ6 628 aa18.82■□□□□ 0.6
RLF-201ENST00000372771 PANK3Q9H999 370 aa18.81■□□□□ 0.6
RLF-201ENST00000372771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.81■□□□□ 0.6
RLF-201ENST00000372771 NUTM2FA1L443 756 aa18.81■□□□□ 0.6
RLF-201ENST00000372771 PLIN1O60240 522 aa18.8■□□□□ 0.6
RLF-201ENST00000372771 WASHC2CQ9Y4E1 1318 aa18.79■□□□□ 0.6
RLF-201ENST00000372771 ZNF330Q9Y3S2 320 aaPredicted RBP18.79■□□□□ 0.6
RLF-201ENST00000372771 KIF15Q9NS87 1388 aa18.78■□□□□ 0.6
RLF-201ENST00000372771 CENPJQ9HC77 1338 aaPredicted RBP18.77■□□□□ 0.6
RLF-201ENST00000372771 PMFBP1Q8TBY8 1022 aa18.77■□□□□ 0.59
RLF-201ENST00000372771 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.59
RLF-201ENST00000372771 L1TD1Q5T7N2 865 aaKnown RBP18.76■□□□□ 0.59
RLF-201ENST00000372771 FOXD4L1Q9NU39 408 aa18.76■□□□□ 0.59
RLF-201ENST00000372771 MYBBP1AQ9BQG0 1328 aaKnown RBP18.76■□□□□ 0.59
RLF-201ENST00000372771 CALD1Q05682 793 aaKnown RBP18.76■□□□□ 0.59
RLF-201ENST00000372771 CSB-PGBD3P0DP91 1061 aa18.75■□□□□ 0.59
RLF-201ENST00000372771 SLC4A10Q6U841 1118 aa18.75■□□□□ 0.59
RLF-201ENST00000372771 CCDC144AA2RUR9 1427 aa18.75■□□□□ 0.59
RLF-201ENST00000372771 IPO9Q96P70 1041 aaKnown RBP18.75■□□□□ 0.59
RLF-201ENST00000372771 TERF2IPQ9NYB0 399 aa18.75■□□□□ 0.59
RLF-201ENST00000372771 BCL2L13Q9BXK5 485 aa18.75■□□□□ 0.59
RLF-201ENST00000372771 PRKRIP1Q9H875 184 aaPredicted RBP18.74■□□□□ 0.59
RLF-201ENST00000372771 KIAA1211Q6ZU35 1233 aa18.73■□□□□ 0.59
RLF-201ENST00000372771 MSNP26038 577 aaKnown RBP18.73■□□□□ 0.59
RLF-201ENST00000372771 GOLGA6L6A8MZA4 724 aa18.72■□□□□ 0.59
RLF-201ENST00000372771 DRC7Q8IY82 874 aa18.72■□□□□ 0.59
RLF-201ENST00000372771 LTV1Q96GA3 475 aaPredicted RBP18.72■□□□□ 0.59
RLF-201ENST00000372771 USP47Q96K76 1375 aa18.72■□□□□ 0.59
RLF-201ENST00000372771 NOL8Q76FK4 1167 aaKnown RBP18.71■□□□□ 0.59
RLF-201ENST00000372771 EXOC6Q8TAG9 804 aa18.71■□□□□ 0.59
RLF-201ENST00000372771 TRIM6-TRIM34B2RNG4 842 aa18.7■□□□□ 0.58
RLF-201ENST00000372771 RSPH4AQ5TD94 716 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms