RNA–Protein interactions for RNA: ENST00000371717.7

PMPCA-201, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCA, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-201ENST00000371717 EIF4G2P78344 907 aaKnown RBP eCLIP29.22■■■□□ 2.27
PMPCA-201ENST00000371717 NUP160Q12769 1436 aa29.21■■■□□ 2.27
PMPCA-201ENST00000371717 HNRNPUQ00839 825 aaKnown RBP eCLIP29.2■■■□□ 2.27
PMPCA-201ENST00000371717 JPH4Q96JJ6 628 aa29.2■■■□□ 2.27
PMPCA-201ENST00000371717 CNTLNQ9NXG0 1405 aa29.18■■■□□ 2.26
PMPCA-201ENST00000371717 KDM6BO15054 1643 aa29.17■■■□□ 2.26
PMPCA-201ENST00000371717 CHIC2Q9UKJ5 165 aa29.17■■■□□ 2.26
PMPCA-201ENST00000371717 MPHOSPH9Q99550 1183 aa29.16■■■□□ 2.26
PMPCA-201ENST00000371717 ERICH6BQ5W0A0 696 aa29.16■■■□□ 2.26
PMPCA-201ENST00000371717 KIAA0556O60303 1618 aa29.15■■■□□ 2.26
PMPCA-201ENST00000371717 ROCK1Q13464 1354 aa29.12■■■□□ 2.25
PMPCA-201ENST00000371717 NCOA1Q15788 1441 aa29.12■■■□□ 2.25
PMPCA-201ENST00000371717 CDK13Q14004 1512 aaKnown RBP29.08■■■□□ 2.25
PMPCA-201ENST00000371717 L3MBTL2Q969R5 705 aa29.08■■■□□ 2.25
PMPCA-201ENST00000371717 CCDC7Q96M83 1385 aa29.06■■■□□ 2.24
PMPCA-201ENST00000371717 RPRD2Q5VT52 1461 aaKnown RBP29.06■■■□□ 2.24
PMPCA-201ENST00000371717 ANKRD30BQ9BXX2 1392 aa29.05■■■□□ 2.24
PMPCA-201ENST00000371717 DAPK1P53355 1430 aa29.03■■■□□ 2.24
PMPCA-201ENST00000371717 CARMIL2Q6F5E8 1435 aa29.02■■■□□ 2.24
PMPCA-201ENST00000371717 DNMT1P26358 1616 aaKnown RBP29.01■■■□□ 2.23
PMPCA-201ENST00000371717 PRKRIP1Q9H875 184 aaPredicted RBP29.01■■■□□ 2.23
PMPCA-201ENST00000371717 TEX14Q8IWB6 1497 aa29■■■□□ 2.23
PMPCA-201ENST00000371717 CDK11AQ9UQ88 783 aaPredicted RBP28.99■■■□□ 2.23
PMPCA-201ENST00000371717 CHD1O14646 1710 aa28.99■■■□□ 2.23
PMPCA-201ENST00000371717 POLR1AO95602 1720 aaPredicted RBP28.97■■■□□ 2.23
PMPCA-201ENST00000371717 FANCIQ9NVI1 1328 aa28.96■■■□□ 2.23
PMPCA-201ENST00000371717 ABCC5O15440 1437 aa28.96■■■□□ 2.23
PMPCA-201ENST00000371717 SPATA31E1Q6ZUB1 1445 aa28.96■■■□□ 2.23
PMPCA-201ENST00000371717 PLB1Q6P1J6 1458 aa28.95■■■□□ 2.22
PMPCA-201ENST00000371717 C11orf95C9JLR9 678 aaPredicted RBP28.95■■■□□ 2.22
PMPCA-201ENST00000371717 PRG4Q92954 1404 aaPredicted RBP28.94■■■□□ 2.22
PMPCA-201ENST00000371717 NUP153P49790 1475 aaKnown RBP28.93■■■□□ 2.22
PMPCA-201ENST00000371717 PPP4R2Q9NY27 417 aa28.93■■■□□ 2.22
PMPCA-201ENST00000371717 ZBED9Q6R2W3 1325 aa28.93■■■□□ 2.22
PMPCA-201ENST00000371717 CCDC184Q52MB2 194 aa28.91■■■□□ 2.22
PMPCA-201ENST00000371717 FOXD1Q16676 465 aa28.91■■■□□ 2.22
PMPCA-201ENST00000371717 NBPF8Q3BBV2 869 aa28.91■■■□□ 2.22
PMPCA-201ENST00000371717 RAPGEF6Q8TEU7 1601 aa28.9■■■□□ 2.22
PMPCA-201ENST00000371717 MRS2Q9HD23 443 aa28.88■■■□□ 2.21
PMPCA-201ENST00000371717 IRX6P78412 446 aaPredicted RBP28.87■■■□□ 2.21
PMPCA-201ENST00000371717 KIF7Q2M1P5 1343 aa28.85■■■□□ 2.21
PMPCA-201ENST00000371717 SLC4A1APQ9BWU0 796 aaKnown RBP28.84■■■□□ 2.21
PMPCA-201ENST00000371717 MSH5O43196 834 aa28.81■■■□□ 2.2
PMPCA-201ENST00000371717 FAM9BQ8IZU0 186 aa28.81■■■□□ 2.2
PMPCA-201ENST00000371717 PTPRGP23470 1445 aa28.79■■■□□ 2.2
PMPCA-201ENST00000371717 PZPP20742 1482 aa28.79■■■□□ 2.2
PMPCA-201ENST00000371717 MBD5Q9P267 1494 aa28.77■■■□□ 2.2
PMPCA-201ENST00000371717 ZNF644Q9H582 1327 aaPredicted RBP28.76■■■□□ 2.19
PMPCA-201ENST00000371717 ADGBQ8N7X0 1667 aa28.75■■■□□ 2.19
PMPCA-201ENST00000371717 ITSN2Q9NZM3 1697 aa28.73■■■□□ 2.19
PMPCA-201ENST00000371717 ADGRL2O95490 1459 aa28.73■■■□□ 2.19
PMPCA-201ENST00000371717 TROQ12816 1431 aaPredicted RBP28.73■■■□□ 2.19
PMPCA-201ENST00000371717 ARID4BQ4LE39 1312 aaPredicted RBP28.72■■■□□ 2.19
PMPCA-201ENST00000371717 CAMSAP2Q08AD1 1489 aa28.72■■■□□ 2.19
PMPCA-201ENST00000371717 ERCC6L2Q5T890 1561 aa28.71■■■□□ 2.19
PMPCA-201ENST00000371717 KIAA1107Q9UPP5 1409 aa28.71■■■□□ 2.19
PMPCA-201ENST00000371717 ABCA8O94911 1581 aa28.7■■■□□ 2.19
PMPCA-201ENST00000371717 DHX29Q7Z478 1369 aaKnown RBP28.69■■■□□ 2.18
PMPCA-201ENST00000371717 SMG6Q86US8 1419 aaKnown RBP28.68■■■□□ 2.18
PMPCA-201ENST00000371717 SHROOM2Q13796 1616 aa28.67■■■□□ 2.18
PMPCA-201ENST00000371717 KIF14Q15058 1648 aa28.66■■■□□ 2.18
PMPCA-201ENST00000371717 ATP10BO94823 1461 aa28.66■■■□□ 2.18
PMPCA-201ENST00000371717 ADCY10Q96PN6 1610 aa28.66■■■□□ 2.18
PMPCA-201ENST00000371717 CROCC2H7BZ55 1655 aa28.65■■■□□ 2.18
PMPCA-201ENST00000371717 CFDP1Q9UEE9 299 aaPredicted RBP28.64■■■□□ 2.18
PMPCA-201ENST00000371717 GPATCH8Q9UKJ3 1502 aaKnown RBP28.64■■■□□ 2.17
PMPCA-201ENST00000371717 USP47Q96K76 1375 aa28.64■■■□□ 2.17
PMPCA-201ENST00000371717 PLEKHD1A6NEE1 506 aa28.63■■■□□ 2.17
PMPCA-201ENST00000371717 CLASP1Q7Z460 1538 aa28.63■■■□□ 2.17
PMPCA-201ENST00000371717 ERICH6Q7L0X2 663 aa28.61■■■□□ 2.17
PMPCA-201ENST00000371717 KDM5CP41229 1560 aa28.6■■■□□ 2.17
PMPCA-201ENST00000371717 BCORL1Q5H9F3 1711 aa28.6■■■□□ 2.17
PMPCA-201ENST00000371717 ANKRD30AQ9BXX3 1397 aa28.59■■■□□ 2.17
PMPCA-201ENST00000371717 UHRF1BP1Q6BDS2 1440 aa28.59■■■□□ 2.17
PMPCA-201ENST00000371717 B4GALNT3Q6L9W6 998 aa28.59■■■□□ 2.17
PMPCA-201ENST00000371717 ROCK2O75116 1388 aaKnown RBP28.59■■■□□ 2.17
PMPCA-201ENST00000371717 RNF123Q5XPI4 1314 aa28.57■■■□□ 2.16
PMPCA-201ENST00000371717 BCL11AQ9H165 835 aa28.55■■■□□ 2.16
PMPCA-201ENST00000371717 NUDCQ9Y266 331 aa28.55■■■□□ 2.16
PMPCA-201ENST00000371717 RALGAPBQ86X10 1494 aa28.54■■■□□ 2.16
PMPCA-201ENST00000371717 PKD2Q13563 968 aa28.54■■■□□ 2.16
PMPCA-201ENST00000371717 ARHGEF12Q9NZN5 1544 aa28.52■■■□□ 2.16
PMPCA-201ENST00000371717 ANKRD50Q9ULJ7 1429 aa28.52■■■□□ 2.16
PMPCA-201ENST00000371717 SHANK2Q9UPX8 1470 aa28.51■■■□□ 2.15
PMPCA-201ENST00000371717 ZNF777Q9ULD5 760 aaPredicted RBP28.51■■■□□ 2.15
PMPCA-201ENST00000371717 MYT1LQ9UL68 1186 aa28.5■■■□□ 2.15
PMPCA-201ENST00000371717 KDM5DQ9BY66 1539 aa28.47■■■□□ 2.15
PMPCA-201ENST00000371717 KTN1Q86UP2 1357 aaKnown RBP28.45■■■□□ 2.15
PMPCA-201ENST00000371717 PNISRQ8TF01 805 aaKnown RBP28.44■■■□□ 2.14
PMPCA-201ENST00000371717 OSCARQ8IYS5 282 aa28.44■■■□□ 2.14
PMPCA-201ENST00000371717 ZNF326Q5BKZ1 582 aaKnown RBP28.43■■■□□ 2.14
PMPCA-201ENST00000371717 KIF15Q9NS87 1388 aa28.42■■■□□ 2.14
PMPCA-201ENST00000371717 ABCC2Q92887 1545 aa28.4■■■□□ 2.14
PMPCA-201ENST00000371717 C9orf84Q5VXU9 1444 aa28.39■■■□□ 2.14
PMPCA-201ENST00000371717 NUP155O75694 1391 aa28.39■■■□□ 2.14
PMPCA-201ENST00000371717 CDC42BPAQ5VT25 1732 aa28.39■■■□□ 2.14
PMPCA-201ENST00000371717 POLR3GLQ9BT43 218 aa28.38■■■□□ 2.13
PMPCA-201ENST00000371717 TMC1Q8TDI8 760 aa28.38■■■□□ 2.13
PMPCA-201ENST00000371717 ABCC10Q5T3U5 1492 aa28.38■■■□□ 2.13
PMPCA-201ENST00000371717 LRPPRCP42704 1394 aaKnown RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms