RNA–Protein interactions for RNA: ENST00000371610.6

PARD6B-201, Transcript of par-6 family cell polarity regulator beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARD6B, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-201ENST00000371610 FMN1Q68DA7 1419 aa16.81■□□□□ 0.28
PARD6B-201ENST00000371610 HNRNPMP52272 730 aaKnown RBP eCLIP16.81■□□□□ 0.28
PARD6B-201ENST00000371610 RUSC2Q8N2Y8 1516 aa16.8■□□□□ 0.28
PARD6B-201ENST00000371610 ROCK2O75116 1388 aaKnown RBP16.8■□□□□ 0.28
PARD6B-201ENST00000371610 KTN1Q86UP2 1357 aaKnown RBP16.8■□□□□ 0.28
PARD6B-201ENST00000371610 GLIPR1L2Q4G1C9 344 aa16.79■□□□□ 0.28
PARD6B-201ENST00000371610 U2AF1L5P0DN76 240 aaPredicted RBP16.78■□□□□ 0.28
PARD6B-201ENST00000371610 U2AF1Q01081 240 aaKnown RBP eCLIP16.78■□□□□ 0.28
PARD6B-201ENST00000371610 SPRYD3Q8NCJ5 442 aa16.78■□□□□ 0.28
PARD6B-201ENST00000371610 RCAN3Q9UKA8 241 aa16.78■□□□□ 0.28
PARD6B-201ENST00000371610 OS9Q13438 667 aaPredicted RBP16.77■□□□□ 0.28
PARD6B-201ENST00000371610 EFCAB2Q5VUJ9 269 aa16.77■□□□□ 0.28
PARD6B-201ENST00000371610 PTMAP06454 111 aaKnown RBP16.77■□□□□ 0.28
PARD6B-201ENST00000371610 MS4A1P11836 297 aa16.77■□□□□ 0.28
PARD6B-201ENST00000371610 CARMIL2Q6F5E8 1435 aa16.77■□□□□ 0.27
PARD6B-201ENST00000371610 KIF3BO15066 747 aa16.77■□□□□ 0.27
PARD6B-201ENST00000371610 APBB1O00213 710 aa16.76■□□□□ 0.27
PARD6B-201ENST00000371610 HSP90AB1P08238 724 aaKnown RBP16.76■□□□□ 0.27
PARD6B-201ENST00000371610 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
PARD6B-201ENST00000371610 SMARCA2P51531 1590 aa16.75■□□□□ 0.27
PARD6B-201ENST00000371610 PLCB2Q00722 1185 aa16.75■□□□□ 0.27
PARD6B-201ENST00000371610 ANKRD30AQ9BXX3 1397 aa16.74■□□□□ 0.27
PARD6B-201ENST00000371610 NUTM2DQ5VT03 806 aaPredicted RBP16.73■□□□□ 0.27
PARD6B-201ENST00000371610 PNNQ9H307 717 aaKnown RBP16.73■□□□□ 0.27
PARD6B-201ENST00000371610 CHMP4BQ9H444 224 aaKnown RBP16.73■□□□□ 0.27
PARD6B-201ENST00000371610 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
PARD6B-201ENST00000371610 KCNJ4P48050 445 aa16.72■□□□□ 0.27
PARD6B-201ENST00000371610 RALBP1Q15311 655 aa16.71■□□□□ 0.27
PARD6B-201ENST00000371610 FGD1P98174 961 aa16.7■□□□□ 0.26
PARD6B-201ENST00000371610 ZRSR1Q15695 479 aaKnown RBP16.7■□□□□ 0.26
PARD6B-201ENST00000371610 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
PARD6B-201ENST00000371610 DHX57Q6P158 1386 aaKnown RBP16.7■□□□□ 0.26
PARD6B-201ENST00000371610 DNTTIP2Q5QJE6 756 aaKnown RBP16.69■□□□□ 0.26
PARD6B-201ENST00000371610 CLUAP1Q96AJ1 413 aa16.69■□□□□ 0.26
PARD6B-201ENST00000371610 ERICH6BQ5W0A0 696 aa16.69■□□□□ 0.26
PARD6B-201ENST00000371610 CCDC146Q8IYE0 955 aa16.69■□□□□ 0.26
PARD6B-201ENST00000371610 ST20-MTHFSA0A0A6YYL1 179 aa16.68■□□□□ 0.26
PARD6B-201ENST00000371610 JPH4Q96JJ6 628 aa16.68■□□□□ 0.26
PARD6B-201ENST00000371610 HDGFL2Q7Z4V5 671 aaPredicted RBP16.68■□□□□ 0.26
PARD6B-201ENST00000371610 TSHZ2Q9NRE2 1034 aa16.68■□□□□ 0.26
PARD6B-201ENST00000371610 HDGFP51858 240 aaKnown RBP16.67■□□□□ 0.26
PARD6B-201ENST00000371610 NAP1L2Q9ULW6 460 aaPredicted RBP16.67■□□□□ 0.26
PARD6B-201ENST00000371610 NLRP13Q86W25 1043 aa16.66■□□□□ 0.26
PARD6B-201ENST00000371610 HSCBQ8IWL3 235 aa16.66■□□□□ 0.26
PARD6B-201ENST00000371610 RTF1Q92541 710 aaKnown RBP16.66■□□□□ 0.26
PARD6B-201ENST00000371610 CYB5RLQ6IPT4 315 aa16.65■□□□□ 0.26
PARD6B-201ENST00000371610 SLKQ9H2G2 1235 aaPredicted RBP16.65■□□□□ 0.26
PARD6B-201ENST00000371610 PAK3O75914 559 aaPredicted RBP16.65■□□□□ 0.26
PARD6B-201ENST00000371610 ITPRIPQ8IWB1 547 aa16.64■□□□□ 0.25
PARD6B-201ENST00000371610 DEKP35659 375 aaKnown RBP16.63■□□□□ 0.25
PARD6B-201ENST00000371610 SPAG9O60271 1321 aaKnown RBP16.63■□□□□ 0.25
PARD6B-201ENST00000371610 ATAD2BQ9ULI0 1458 aa16.63■□□□□ 0.25
PARD6B-201ENST00000371610 TRAK1Q9UPV9 953 aa16.62■□□□□ 0.25
PARD6B-201ENST00000371610 GOLGA2Q08379 1002 aa16.62■□□□□ 0.25
PARD6B-201ENST00000371610 NUTM2FA1L443 756 aa16.62■□□□□ 0.25
PARD6B-201ENST00000371610 IPO8O15397 1037 aaKnown RBP16.62■□□□□ 0.25
PARD6B-201ENST00000371610 CDK11BP21127 795 aaKnown RBP16.62■□□□□ 0.25
PARD6B-201ENST00000371610 NAP1L5Q96NT1 182 aaPredicted RBP16.62■□□□□ 0.25
PARD6B-201ENST00000371610 NPHP1O15259 732 aa16.61■□□□□ 0.25
PARD6B-201ENST00000371610 WASHC2CQ9Y4E1 1318 aa16.59■□□□□ 0.25
PARD6B-201ENST00000371610 SMC4Q9NTJ3 1288 aa16.58■□□□□ 0.25
PARD6B-201ENST00000371610 RRP7AQ9Y3A4 280 aaKnown RBP16.58■□□□□ 0.25
PARD6B-201ENST00000371610 TULP1O00294 542 aaPredicted RBP16.58■□□□□ 0.24
PARD6B-201ENST00000371610 TCERG1O14776 1098 aaKnown RBP16.58■□□□□ 0.24
PARD6B-201ENST00000371610 PRKRIP1Q9H875 184 aaPredicted RBP16.58■□□□□ 0.24
PARD6B-201ENST00000371610 PANK3Q9H999 370 aa16.57■□□□□ 0.24
PARD6B-201ENST00000371610 RWDD1Q9H446 243 aaPredicted RBP16.57■□□□□ 0.24
PARD6B-201ENST00000371610 CCDC18Q5T9S5 1454 aa16.56■□□□□ 0.24
PARD6B-201ENST00000371610 GZF1Q9H116 711 aaPredicted RBP16.56■□□□□ 0.24
PARD6B-201ENST00000371610 GOLGA6L4A6NEF3 574 aa16.55■□□□□ 0.24
PARD6B-201ENST00000371610 PLIN1O60240 522 aa16.55■□□□□ 0.24
PARD6B-201ENST00000371610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.55■□□□□ 0.24
PARD6B-201ENST00000371610 BCL2L13Q9BXK5 485 aa16.55■□□□□ 0.24
PARD6B-201ENST00000371610 RSPH4AQ5TD94 716 aa16.54■□□□□ 0.24
PARD6B-201ENST00000371610 ZNF330Q9Y3S2 320 aaPredicted RBP16.54■□□□□ 0.24
PARD6B-201ENST00000371610 TERF2IPQ9NYB0 399 aa16.54■□□□□ 0.24
PARD6B-201ENST00000371610 MFAP1P55081 439 aaKnown RBP16.53■□□□□ 0.24
PARD6B-201ENST00000371610 CENPJQ9HC77 1338 aaPredicted RBP16.51■□□□□ 0.23
PARD6B-201ENST00000371610 ELL2O00472 640 aaPredicted RBP16.51■□□□□ 0.23
PARD6B-201ENST00000371610 MCCP23508 829 aa16.51■□□□□ 0.23
PARD6B-201ENST00000371610 EIF3AQ14152 1382 aaKnown RBP16.51■□□□□ 0.23
PARD6B-201ENST00000371610 SLC4A10Q6U841 1118 aa16.5■□□□□ 0.23
PARD6B-201ENST00000371610 CALD1Q05682 793 aaKnown RBP16.5■□□□□ 0.23
PARD6B-201ENST00000371610 PDE3BQ13370 1112 aa16.5■□□□□ 0.23
PARD6B-201ENST00000371610 CCDC144AA2RUR9 1427 aa16.5■□□□□ 0.23
PARD6B-201ENST00000371610 ZNF644Q9H582 1327 aaPredicted RBP16.49■□□□□ 0.23
PARD6B-201ENST00000371610 CSB-PGBD3P0DP91 1061 aa16.49■□□□□ 0.23
PARD6B-201ENST00000371610 MYBBP1AQ9BQG0 1328 aaKnown RBP16.49■□□□□ 0.23
PARD6B-201ENST00000371610 LTV1Q96GA3 475 aaPredicted RBP16.49■□□□□ 0.23
PARD6B-201ENST00000371610 STK31Q9BXU1 1019 aa16.47■□□□□ 0.23
PARD6B-201ENST00000371610 IGF1RP08069 1367 aa16.47■□□□□ 0.23
PARD6B-201ENST00000371610 KIF15Q9NS87 1388 aa16.47■□□□□ 0.23
PARD6B-201ENST00000371610 KIAA1211Q6ZU35 1233 aa16.47■□□□□ 0.23
PARD6B-201ENST00000371610 NGDNQ8NEJ9 315 aaKnown RBP16.47■□□□□ 0.23
PARD6B-201ENST00000371610 IPO9Q96P70 1041 aaKnown RBP16.47■□□□□ 0.23
PARD6B-201ENST00000371610 SMARCA4P51532 1647 aa16.47■□□□□ 0.23
PARD6B-201ENST00000371610 USP47Q96K76 1375 aa16.47■□□□□ 0.23
PARD6B-201ENST00000371610 FANCD2Q9BXW9 1451 aa16.47■□□□□ 0.23
PARD6B-201ENST00000371610 PMFBP1Q8TBY8 1022 aa16.46■□□□□ 0.23
PARD6B-201ENST00000371610 OSCARQ8IYS5 282 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms