RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 ABCA9Q8IUA7 1624 aa6.88□□□□□ -1.31
CDR1-201ENST00000370532 ARAP3Q8WWN8 1544 aa6.87□□□□□ -1.31
CDR1-201ENST00000370532 NEO1Q92859 1461 aa6.85□□□□□ -1.31
CDR1-201ENST00000370532 TSPOAP1O95153 1857 aa6.85□□□□□ -1.31
CDR1-201ENST00000370532 RAPGEF6Q8TEU7 1601 aa6.85□□□□□ -1.31
CDR1-201ENST00000370532 MKRN4PQ13434 485 aaPredicted RBP6.82□□□□□ -1.32
CDR1-201ENST00000370532 ZEB1P37275 1124 aaPredicted RBP6.81□□□□□ -1.32
CDR1-201ENST00000370532 ZMYM4Q5VZL5 1548 aa6.8□□□□□ -1.32
CDR1-201ENST00000370532 CD109Q6YHK3 1445 aa6.8□□□□□ -1.32
CDR1-201ENST00000370532 ATP10BO94823 1461 aa6.79□□□□□ -1.32
CDR1-201ENST00000370532 ADGRL1O94910 1474 aa6.79□□□□□ -1.32
CDR1-201ENST00000370532 MAGI2Q86UL8 1455 aa6.79□□□□□ -1.32
CDR1-201ENST00000370532 ZNF219Q9P2Y4 722 aaPredicted RBP6.78□□□□□ -1.32
CDR1-201ENST00000370532 ADAMTSL3P82987 1691 aa6.78□□□□□ -1.32
CDR1-201ENST00000370532 ARHGEF40Q8TER5 1519 aa6.77□□□□□ -1.33
CDR1-201ENST00000370532 HECW1Q76N89 1606 aa6.77□□□□□ -1.33
CDR1-201ENST00000370532 ANO8Q9HCE9 1232 aaPredicted RBP6.76□□□□□ -1.33
CDR1-201ENST00000370532 FHOD3Q2V2M9 1422 aa6.76□□□□□ -1.33
CDR1-201ENST00000370532 REREQ9P2R6 1566 aa6.76□□□□□ -1.33
CDR1-201ENST00000370532 COL17A1Q9UMD9 1497 aaPredicted RBP6.76□□□□□ -1.33
CDR1-201ENST00000370532 NUP153P49790 1475 aaKnown RBP6.76□□□□□ -1.33
CDR1-201ENST00000370532 RICTORQ6R327 1708 aa6.75□□□□□ -1.33
CDR1-201ENST00000370532 SAMD1Q6SPF0 538 aaPredicted RBP6.75□□□□□ -1.33
CDR1-201ENST00000370532 FMN1Q68DA7 1419 aa6.75□□□□□ -1.33
CDR1-201ENST00000370532 BCORL1Q5H9F3 1711 aa6.75□□□□□ -1.33
CDR1-201ENST00000370532 KDM4FA0A1W2PPD8 638 aa6.74□□□□□ -1.33
CDR1-201ENST00000370532 AMER1Q5JTC6 1135 aaPredicted RBP6.74□□□□□ -1.33
CDR1-201ENST00000370532 FRMPD1Q5SYB0 1578 aa6.74□□□□□ -1.33
CDR1-201ENST00000370532 MYO5CQ9NQX4 1742 aa6.72□□□□□ -1.33
CDR1-201ENST00000370532 RNF39Q9H2S5 420 aa6.72□□□□□ -1.33
CDR1-201ENST00000370532 CCDC18Q5T9S5 1454 aa6.72□□□□□ -1.33
CDR1-201ENST00000370532 DENND4BO75064 1496 aaPredicted RBP6.72□□□□□ -1.33
CDR1-201ENST00000370532 POGZQ7Z3K3 1410 aa6.71□□□□□ -1.34
CDR1-201ENST00000370532 FANCAO15360 1455 aa6.71□□□□□ -1.34
CDR1-201ENST00000370532 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.71□□□□□ -1.34
CDR1-201ENST00000370532 ABCB7O75027 752 aa6.71□□□□□ -1.34
CDR1-201ENST00000370532 TRIM26Q12899 539 aaPredicted RBP6.71□□□□□ -1.34
CDR1-201ENST00000370532 POLA2Q14181 598 aa6.71□□□□□ -1.34
CDR1-201ENST00000370532 AKNAQ7Z591 1439 aa6.7□□□□□ -1.34
CDR1-201ENST00000370532 KIF14Q15058 1648 aa6.7□□□□□ -1.34
CDR1-201ENST00000370532 HECW2Q9P2P5 1572 aa6.7□□□□□ -1.34
CDR1-201ENST00000370532 PLCH2O75038 1416 aa6.7□□□□□ -1.34
CDR1-201ENST00000370532 KDM5CP41229 1560 aa6.69□□□□□ -1.34
CDR1-201ENST00000370532 ZFYVE16Q7Z3T8 1539 aa6.69□□□□□ -1.34
CDR1-201ENST00000370532 TTC37Q6PGP7 1564 aa6.69□□□□□ -1.34
CDR1-201ENST00000370532 AGLP35573 1532 aa6.68□□□□□ -1.34
CDR1-201ENST00000370532 FAM135AQ9P2D6 1515 aa6.68□□□□□ -1.34
CDR1-201ENST00000370532 CLIP1P30622 1438 aa6.68□□□□□ -1.34
CDR1-201ENST00000370532 PLEKHD1A6NEE1 506 aa6.68□□□□□ -1.34
CDR1-201ENST00000370532 CDK11AQ9UQ88 783 aaPredicted RBP6.68□□□□□ -1.34
CDR1-201ENST00000370532 TROQ12816 1431 aaPredicted RBP6.67□□□□□ -1.34
CDR1-201ENST00000370532 PREX2Q70Z35 1606 aa6.67□□□□□ -1.34
CDR1-201ENST00000370532 LOC105371045A0A1W2PR82 267 aa6.67□□□□□ -1.34
CDR1-201ENST00000370532 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.67□□□□□ -1.34
CDR1-201ENST00000370532 HNRNPUL2Q1KMD3 747 aaKnown RBP6.67□□□□□ -1.34
CDR1-201ENST00000370532 CASKIN1Q8WXD9 1431 aa6.67□□□□□ -1.34
CDR1-201ENST00000370532 ARHGEF12Q9NZN5 1544 aa6.67□□□□□ -1.34
CDR1-201ENST00000370532 PTPRMP28827 1452 aa6.67□□□□□ -1.34
CDR1-201ENST00000370532 FYCO1Q9BQS8 1478 aa6.67□□□□□ -1.34
CDR1-201ENST00000370532 EIF5BO60841 1220 aaKnown RBP6.67□□□□□ -1.34
CDR1-201ENST00000370532 CAPN15O75808 1086 aa6.67□□□□□ -1.34
CDR1-201ENST00000370532 TSHZ2Q9NRE2 1034 aa6.67□□□□□ -1.34
CDR1-201ENST00000370532 ARHGAP35Q9NRY4 1499 aa6.66□□□□□ -1.34
CDR1-201ENST00000370532 MROH2AA6NES4 1674 aa6.66□□□□□ -1.34
CDR1-201ENST00000370532 ZNF518AQ6AHZ1 1483 aa6.66□□□□□ -1.34
CDR1-201ENST00000370532 MLH3Q9UHC1 1453 aa6.66□□□□□ -1.34
CDR1-201ENST00000370532 PCF11O94913 1555 aaKnown RBP6.66□□□□□ -1.34
CDR1-201ENST00000370532 C9orf84Q5VXU9 1444 aa6.66□□□□□ -1.34
CDR1-201ENST00000370532 ITSN2Q9NZM3 1697 aa6.65□□□□□ -1.34
CDR1-201ENST00000370532 PLEKHH2Q8IVE3 1493 aa6.65□□□□□ -1.34
CDR1-201ENST00000370532 PLEKHG5O94827 1062 aa6.65□□□□□ -1.34
CDR1-201ENST00000370532 MADDQ8WXG6 1647 aa6.65□□□□□ -1.35
CDR1-201ENST00000370532 ATP10AO60312 1499 aa6.65□□□□□ -1.35
CDR1-201ENST00000370532 FER1L4A9Z1Z3 1794 aa6.65□□□□□ -1.35
CDR1-201ENST00000370532 PREX1Q8TCU6 1659 aa6.64□□□□□ -1.35
CDR1-201ENST00000370532 UBE2Q2Q8WVN8 375 aa6.64□□□□□ -1.35
CDR1-201ENST00000370532 ABCC1P33527 1531 aa6.63□□□□□ -1.35
CDR1-201ENST00000370532 DIEXFQ68CQ4 756 aaKnown RBP6.63□□□□□ -1.35
CDR1-201ENST00000370532 CNTLNQ9NXG0 1405 aa6.63□□□□□ -1.35
CDR1-201ENST00000370532 RIMS1Q86UR5 1692 aaKnown RBP6.63□□□□□ -1.35
CDR1-201ENST00000370532 LRRIQ1Q96JM4 1722 aa6.63□□□□□ -1.35
CDR1-201ENST00000370532 CDC42BPBQ9Y5S2 1711 aa6.63□□□□□ -1.35
CDR1-201ENST00000370532 EFCAB2Q5VUJ9 269 aa6.62□□□□□ -1.35
CDR1-201ENST00000370532 YTHDC1Q96MU7 727 aaKnown RBP6.62□□□□□ -1.35
CDR1-201ENST00000370532 SETD1BQ9UPS6 1966 aaKnown RBP6.62□□□□□ -1.35
CDR1-201ENST00000370532 SPDYE4A6NLX3 237 aa6.62□□□□□ -1.35
CDR1-201ENST00000370532 KIAA1107Q9UPP5 1409 aa6.62□□□□□ -1.35
CDR1-201ENST00000370532 IQSEC2Q5JU85 1478 aa6.62□□□□□ -1.35
CDR1-201ENST00000370532 KCNH8Q96L42 1107 aa6.61□□□□□ -1.35
CDR1-201ENST00000370532 DAXXQ9UER7 740 aaPredicted RBP6.61□□□□□ -1.35
CDR1-201ENST00000370532 SALL2Q9Y467 1007 aaPredicted RBP6.61□□□□□ -1.35
CDR1-201ENST00000370532 DIP2CQ9Y2E4 1556 aa6.61□□□□□ -1.35
CDR1-201ENST00000370532 CDC42BPAQ5VT25 1732 aa6.61□□□□□ -1.35
CDR1-201ENST00000370532 CCDC136Q96JN2 1154 aa6.61□□□□□ -1.35
CDR1-201ENST00000370532 CDK13Q14004 1512 aaKnown RBP6.61□□□□□ -1.35
CDR1-201ENST00000370532 SCAPERQ9BY12 1400 aa6.6□□□□□ -1.35
CDR1-201ENST00000370532 LMTK3Q96Q04 1460 aa6.6□□□□□ -1.35
CDR1-201ENST00000370532 ADGBQ8N7X0 1667 aa6.6□□□□□ -1.35
CDR1-201ENST00000370532 NPATQ14207 1427 aa6.59□□□□□ -1.35
CDR1-201ENST00000370532 ARHGAP5Q13017 1502 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms