RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 AEBP2Q6ZN18 517 aaPredicted RBP11.25□□□□□ -0.61
CDR1-201ENST00000370532 CHIC1Q5VXU3 224 aa10.97□□□□□ -0.65
CDR1-201ENST00000370532 NISCHQ9Y2I1 1504 aa10.22□□□□□ -0.77
CDR1-201ENST00000370532 PHF23Q9BUL5 403 aaPredicted RBP9.91□□□□□ -0.82
CDR1-201ENST00000370532 POTEDQ86YR6 584 aa9.47□□□□□ -0.89
CDR1-201ENST00000370532 CCDC180Q9P1Z9 1646 aa9.37□□□□□ -0.91
CDR1-201ENST00000370532 SENP3Q9H4L4 574 aaPredicted RBP9.13□□□□□ -0.95
CDR1-201ENST00000370532 ABCC9O60706 1549 aa8.96□□□□□ -0.97
CDR1-201ENST00000370532 PLPPR3Q6T4P5 718 aa8.92□□□□□ -0.98
CDR1-201ENST00000370532 RB1CC1Q8TDY2 1594 aa8.8□□□□□ -1
CDR1-201ENST00000370532 MYO15BQ96JP2 1530 aa8.8□□□□□ -1
CDR1-201ENST00000370532 NACADO15069 1562 aa8.79□□□□□ -1
CDR1-201ENST00000370532 ADRA2BP18089 450 aa8.75□□□□□ -1.01
CDR1-201ENST00000370532 PPP6R1Q9UPN7 881 aa8.74□□□□□ -1.01
CDR1-201ENST00000370532 FOXD1Q16676 465 aa8.7□□□□□ -1.02
CDR1-201ENST00000370532 SHROOM4Q9ULL8 1493 aa8.65□□□□□ -1.03
CDR1-201ENST00000370532 DCAF1Q9Y4B6 1507 aa8.64□□□□□ -1.03
CDR1-201ENST00000370532 UNC13AQ9UPW8 1703 aa8.54□□□□□ -1.04
CDR1-201ENST00000370532 ZCCHC6Q5VYS8 1495 aaKnown RBP8.51□□□□□ -1.05
CDR1-201ENST00000370532 BICRAQ9NZM4 1560 aa8.46□□□□□ -1.05
CDR1-201ENST00000370532 DNAJC5BQ9UF47 199 aa8.3□□□□□ -1.08
CDR1-201ENST00000370532 KCNA4P22459 653 aa8.29□□□□□ -1.08
CDR1-201ENST00000370532 EIF4G1Q04637 1599 aaKnown RBP8.25□□□□□ -1.09
CDR1-201ENST00000370532 CC2D2AQ9P2K1 1620 aa8.23□□□□□ -1.09
CDR1-201ENST00000370532 SCRIBQ14160 1630 aa8.23□□□□□ -1.09
CDR1-201ENST00000370532 PABPN1Q86U42 306 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDR1-201ENST00000370532 DCAF8L2P0C7V8 631 aa8.2□□□□□ -1.1
CDR1-201ENST00000370532 PIAS4Q8N2W9 510 aaPredicted RBP8.19□□□□□ -1.1
CDR1-201ENST00000370532 CECR2Q9BXF3 1484 aa8.18□□□□□ -1.1
CDR1-201ENST00000370532 EHMT2Q96KQ7 1210 aa8.06□□□□□ -1.12
CDR1-201ENST00000370532 HMGXB3Q12766 1538 aa8.05□□□□□ -1.12
CDR1-201ENST00000370532 NCAPD3P42695 1498 aa8.05□□□□□ -1.12
CDR1-201ENST00000370532 SMARCA2P51531 1590 aa8.04□□□□□ -1.12
CDR1-201ENST00000370532 PEG3Q9GZU2 1588 aa8.03□□□□□ -1.12
CDR1-201ENST00000370532 PPP4R3CPQ6ZMV5 832 aa8.01□□□□□ -1.13
CDR1-201ENST00000370532 CUX2O14529 1486 aa7.99□□□□□ -1.13
CDR1-201ENST00000370532 SMARCA4P51532 1647 aa7.99□□□□□ -1.13
CDR1-201ENST00000370532 BAZ1AQ9NRL2 1556 aaPredicted RBP7.98□□□□□ -1.13
CDR1-201ENST00000370532 ATAD2BQ9ULI0 1458 aa7.95□□□□□ -1.14
CDR1-201ENST00000370532 LAMC3Q9Y6N6 1575 aa7.91□□□□□ -1.14
CDR1-201ENST00000370532 MAPK8IP2Q13387 824 aaPredicted RBP7.87□□□□□ -1.15
CDR1-201ENST00000370532 BAZ1BQ9UIG0 1483 aaKnown RBP7.86□□□□□ -1.15
CDR1-201ENST00000370532 PELP1Q8IZL8 1130 aaKnown RBP7.84□□□□□ -1.15
CDR1-201ENST00000370532 NPM3O75607 178 aaKnown RBP7.83□□□□□ -1.16
CDR1-201ENST00000370532 THOC2Q8NI27 1593 aaKnown RBP7.82□□□□□ -1.16
CDR1-201ENST00000370532 ERCC6Q03468 1493 aa7.81□□□□□ -1.16
CDR1-201ENST00000370532 CSRNP3Q8WYN3 585 aa7.8□□□□□ -1.16
CDR1-201ENST00000370532 PDS5BQ9NTI5 1447 aa7.79□□□□□ -1.16
CDR1-201ENST00000370532 DNAJC5Q9H3Z4 198 aa7.78□□□□□ -1.16
CDR1-201ENST00000370532 MROH2BQ7Z745 1585 aa7.78□□□□□ -1.16
CDR1-201ENST00000370532 SLC4A1APQ9BWU0 796 aaKnown RBP7.76□□□□□ -1.17
CDR1-201ENST00000370532 PRDM2Q13029 1718 aa7.76□□□□□ -1.17
CDR1-201ENST00000370532 WDR62O43379 1518 aa7.74□□□□□ -1.17
CDR1-201ENST00000370532 ZBTB22O15209 634 aa7.74□□□□□ -1.17
CDR1-201ENST00000370532 CADPSQ9ULU8 1353 aa7.73□□□□□ -1.17
CDR1-201ENST00000370532 KIF21AQ7Z4S6 1674 aa7.73□□□□□ -1.17
CDR1-201ENST00000370532 MRC2Q9UBG0 1479 aa7.72□□□□□ -1.17
CDR1-201ENST00000370532 TOP2AP11388 1531 aaKnown RBP7.72□□□□□ -1.17
CDR1-201ENST00000370532 NESP48681 1621 aa7.69□□□□□ -1.18
CDR1-201ENST00000370532 CFTRP13569 1480 aa7.69□□□□□ -1.18
CDR1-201ENST00000370532 WIZO95785 1651 aa7.67□□□□□ -1.18
CDR1-201ENST00000370532 MSH5O43196 834 aa7.67□□□□□ -1.18
CDR1-201ENST00000370532 CEP164Q9UPV0 1460 aa7.66□□□□□ -1.18
CDR1-201ENST00000370532 ABCC8Q09428 1581 aa7.64□□□□□ -1.19
CDR1-201ENST00000370532 RSF1Q96T23 1441 aaPredicted RBP7.64□□□□□ -1.19
CDR1-201ENST00000370532 MYT1Q01538 1121 aa7.63□□□□□ -1.19
CDR1-201ENST00000370532 WDR97A6NE52 1622 aa7.63□□□□□ -1.19
CDR1-201ENST00000370532 NCBP3Q53F19 620 aaKnown RBP7.62□□□□□ -1.19
CDR1-201ENST00000370532 FANCD2Q9BXW9 1451 aa7.62□□□□□ -1.19
CDR1-201ENST00000370532 CNKSR2Q8WXI2 1034 aa7.61□□□□□ -1.19
CDR1-201ENST00000370532 IFT140Q96RY7 1462 aa7.56□□□□□ -1.2
CDR1-201ENST00000370532 DNMBPQ6XZF7 1577 aa7.54□□□□□ -1.2
CDR1-201ENST00000370532 URB2Q14146 1524 aaKnown RBP7.54□□□□□ -1.2
CDR1-201ENST00000370532 CCDC88BA6NC98 1476 aa7.51□□□□□ -1.21
CDR1-201ENST00000370532 HRCP23327 699 aa7.5□□□□□ -1.21
CDR1-201ENST00000370532 TOPBP1Q92547 1522 aa7.49□□□□□ -1.21
CDR1-201ENST00000370532 SCAF1Q9H7N4 1312 aaKnown RBP7.49□□□□□ -1.21
CDR1-201ENST00000370532 TARBP1Q13395 1621 aaKnown RBP7.47□□□□□ -1.21
CDR1-201ENST00000370532 EIF4G3O43432 1585 aaKnown RBP7.45□□□□□ -1.22
CDR1-201ENST00000370532 OSCARQ8IYS5 282 aa7.43□□□□□ -1.22
CDR1-201ENST00000370532 SLC4A2P04920 1241 aa7.41□□□□□ -1.22
CDR1-201ENST00000370532 MAGI1Q96QZ7 1491 aaPredicted RBP7.41□□□□□ -1.22
CDR1-201ENST00000370532 PPARGC1BQ86YN6 1023 aaKnown RBP7.4□□□□□ -1.22
CDR1-201ENST00000370532 DMRT2Q9Y5R5 561 aa7.4□□□□□ -1.23
CDR1-201ENST00000370532 RIMBP3CA6NJZ7 1639 aa7.4□□□□□ -1.23
CDR1-201ENST00000370532 RIMBP3BA6NNM3 1639 aa7.4□□□□□ -1.23
CDR1-201ENST00000370532 RIMBP3Q9UFD9 1639 aa7.4□□□□□ -1.23
CDR1-201ENST00000370532 RNF216Q9NWF9 866 aaPredicted RBP7.39□□□□□ -1.23
CDR1-201ENST00000370532 POLA1P09884 1462 aaPredicted RBP7.39□□□□□ -1.23
CDR1-201ENST00000370532 CHD1O14646 1710 aa7.39□□□□□ -1.23
CDR1-201ENST00000370532 CLASP1Q7Z460 1538 aa7.37□□□□□ -1.23
CDR1-201ENST00000370532 SYNJ1O43426 1573 aa7.37□□□□□ -1.23
CDR1-201ENST00000370532 PRKCSHP14314 528 aaPredicted RBP7.36□□□□□ -1.23
CDR1-201ENST00000370532 ARHGEF11O15085 1522 aa7.36□□□□□ -1.23
CDR1-201ENST00000370532 ZNF608Q9ULD9 1512 aaPredicted RBP7.36□□□□□ -1.23
CDR1-201ENST00000370532 BIVM-ERCC5R4GMW8 1640 aa7.36□□□□□ -1.23
CDR1-201ENST00000370532 GRIN2BQ13224 1484 aa7.35□□□□□ -1.23
CDR1-201ENST00000370532 PBRM1Q86U86 1689 aa7.35□□□□□ -1.23
CDR1-201ENST00000370532 ABCA5Q8WWZ7 1642 aa7.35□□□□□ -1.23
CDR1-201ENST00000370532 ABCA10Q8WWZ4 1543 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms