RNA–Protein interactions for RNA: ENST00000370008.3

STXBP3-201, Transcript of syntaxin binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STXBP3, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STXBP3-201ENST00000370008 MRC2Q9UBG0 1479 aa24.22■■□□□ 1.47
STXBP3-201ENST00000370008 ANKRD30BQ9BXX2 1392 aa24.21■■□□□ 1.47
STXBP3-201ENST00000370008 IRX6P78412 446 aaPredicted RBP24.21■■□□□ 1.47
STXBP3-201ENST00000370008 CCDC184Q52MB2 194 aa24.21■■□□□ 1.47
STXBP3-201ENST00000370008 ABCC5O15440 1437 aa24.21■■□□□ 1.47
STXBP3-201ENST00000370008 NBPF8Q3BBV2 869 aa24.21■■□□□ 1.47
STXBP3-201ENST00000370008 CCDC7Q96M83 1385 aa24.2■■□□□ 1.46
STXBP3-201ENST00000370008 SLC4A1APQ9BWU0 796 aaKnown RBP24.19■■□□□ 1.46
STXBP3-201ENST00000370008 NCOA1Q15788 1441 aa24.18■■□□□ 1.46
STXBP3-201ENST00000370008 RPRD2Q5VT52 1461 aaKnown RBP24.18■■□□□ 1.46
STXBP3-201ENST00000370008 ZNF608Q9ULD9 1512 aaPredicted RBP24.18■■□□□ 1.46
STXBP3-201ENST00000370008 DNMT1P26358 1616 aaKnown RBP24.15■■□□□ 1.46
STXBP3-201ENST00000370008 PRKRIP1Q9H875 184 aaPredicted RBP24.15■■□□□ 1.46
STXBP3-201ENST00000370008 DISP1Q96F81 1524 aa24.15■■□□□ 1.46
STXBP3-201ENST00000370008 NUP153P49790 1475 aaKnown RBP24.14■■□□□ 1.46
STXBP3-201ENST00000370008 KIAA0556O60303 1618 aa24.14■■□□□ 1.46
STXBP3-201ENST00000370008 KIAA0586Q9BVV6 1533 aa24.14■■□□□ 1.46
STXBP3-201ENST00000370008 CDK11AQ9UQ88 783 aaPredicted RBP24.14■■□□□ 1.45
STXBP3-201ENST00000370008 FAM9BQ8IZU0 186 aa24.13■■□□□ 1.45
STXBP3-201ENST00000370008 TEX14Q8IWB6 1497 aa24.12■■□□□ 1.45
STXBP3-201ENST00000370008 MRS2Q9HD23 443 aa24.11■■□□□ 1.45
STXBP3-201ENST00000370008 IFT140Q96RY7 1462 aa24.11■■□□□ 1.45
STXBP3-201ENST00000370008 RAPGEF6Q8TEU7 1601 aa24.09■■□□□ 1.45
STXBP3-201ENST00000370008 KIF7Q2M1P5 1343 aa24.08■■□□□ 1.45
STXBP3-201ENST00000370008 PRG4Q92954 1404 aaPredicted RBP24.06■■□□□ 1.44
STXBP3-201ENST00000370008 CFDP1Q9UEE9 299 aaPredicted RBP24.06■■□□□ 1.44
STXBP3-201ENST00000370008 SPATA31E1Q6ZUB1 1445 aa24.05■■□□□ 1.44
STXBP3-201ENST00000370008 ZNF777Q9ULD5 760 aaPredicted RBP24.04■■□□□ 1.44
STXBP3-201ENST00000370008 GRIN2AQ12879 1464 aa24.03■■□□□ 1.44
STXBP3-201ENST00000370008 PZPP20742 1482 aa24.02■■□□□ 1.43
STXBP3-201ENST00000370008 TROQ12816 1431 aaPredicted RBP24.01■■□□□ 1.43
STXBP3-201ENST00000370008 CAMSAP2Q08AD1 1489 aa24.01■■□□□ 1.43
STXBP3-201ENST00000370008 ERICH6BQ5W0A0 696 aa23.99■■□□□ 1.43
STXBP3-201ENST00000370008 ZBED9Q6R2W3 1325 aa23.98■■□□□ 1.43
STXBP3-201ENST00000370008 ZNF326Q5BKZ1 582 aaKnown RBP23.98■■□□□ 1.43
STXBP3-201ENST00000370008 PPP4R2Q9NY27 417 aa23.98■■□□□ 1.43
STXBP3-201ENST00000370008 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
STXBP3-201ENST00000370008 POLR3GLQ9BT43 218 aa23.96■■□□□ 1.43
STXBP3-201ENST00000370008 PLB1Q6P1J6 1458 aa23.96■■□□□ 1.43
STXBP3-201ENST00000370008 GPATCH8Q9UKJ3 1502 aaKnown RBP23.96■■□□□ 1.43
STXBP3-201ENST00000370008 PKD2Q13563 968 aa23.94■■□□□ 1.42
STXBP3-201ENST00000370008 CHMP7Q8WUX9 453 aaPredicted RBP23.94■■□□□ 1.42
STXBP3-201ENST00000370008 KIAA1107Q9UPP5 1409 aa23.94■■□□□ 1.42
STXBP3-201ENST00000370008 EIF4G3O43432 1585 aaKnown RBP23.93■■□□□ 1.42
STXBP3-201ENST00000370008 POLR1AO95602 1720 aaPredicted RBP23.92■■□□□ 1.42
STXBP3-201ENST00000370008 FBLN2P98095 1184 aa23.91■■□□□ 1.42
STXBP3-201ENST00000370008 ITSN2Q9NZM3 1697 aa23.91■■□□□ 1.42
STXBP3-201ENST00000370008 ADGBQ8N7X0 1667 aa23.9■■□□□ 1.42
STXBP3-201ENST00000370008 KIF14Q15058 1648 aa23.9■■□□□ 1.42
STXBP3-201ENST00000370008 USP47Q96K76 1375 aa23.9■■□□□ 1.42
STXBP3-201ENST00000370008 ANKRD30AQ9BXX3 1397 aa23.9■■□□□ 1.42
STXBP3-201ENST00000370008 MSH5O43196 834 aa23.9■■□□□ 1.42
STXBP3-201ENST00000370008 MBD5Q9P267 1494 aa23.89■■□□□ 1.42
STXBP3-201ENST00000370008 ADGRL2O95490 1459 aa23.88■■□□□ 1.41
STXBP3-201ENST00000370008 B4GALNT3Q6L9W6 998 aa23.87■■□□□ 1.41
STXBP3-201ENST00000370008 DHX29Q7Z478 1369 aaKnown RBP23.87■■□□□ 1.41
STXBP3-201ENST00000370008 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
STXBP3-201ENST00000370008 FANCIQ9NVI1 1328 aa23.84■■□□□ 1.41
STXBP3-201ENST00000370008 ANKRD50Q9ULJ7 1429 aa23.84■■□□□ 1.41
STXBP3-201ENST00000370008 MAGI1Q96QZ7 1491 aaPredicted RBP23.84■■□□□ 1.41
STXBP3-201ENST00000370008 JPH4Q96JJ6 628 aa23.84■■□□□ 1.41
STXBP3-201ENST00000370008 ADCY10Q96PN6 1610 aa23.83■■□□□ 1.41
STXBP3-201ENST00000370008 CROCC2H7BZ55 1655 aa23.83■■□□□ 1.41
STXBP3-201ENST00000370008 BCORL1Q5H9F3 1711 aa23.83■■□□□ 1.41
STXBP3-201ENST00000370008 CARMIL2Q6F5E8 1435 aa23.83■■□□□ 1.4
STXBP3-201ENST00000370008 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
STXBP3-201ENST00000370008 PLEKHD1A6NEE1 506 aa23.81■■□□□ 1.4
STXBP3-201ENST00000370008 NUP155O75694 1391 aa23.8■■□□□ 1.4
STXBP3-201ENST00000370008 KDM5CP41229 1560 aa23.77■■□□□ 1.4
STXBP3-201ENST00000370008 ERCC6Q03468 1493 aa23.77■■□□□ 1.4
STXBP3-201ENST00000370008 ARID4BQ4LE39 1312 aaPredicted RBP23.76■■□□□ 1.39
STXBP3-201ENST00000370008 CARD11Q9BXL7 1154 aa23.76■■□□□ 1.39
STXBP3-201ENST00000370008 KDM2AQ9Y2K7 1162 aa23.75■■□□□ 1.39
STXBP3-201ENST00000370008 C9orf84Q5VXU9 1444 aa23.75■■□□□ 1.39
STXBP3-201ENST00000370008 SMG6Q86US8 1419 aaKnown RBP23.75■■□□□ 1.39
STXBP3-201ENST00000370008 TSPY4P0CV99 314 aa23.74■■□□□ 1.39
STXBP3-201ENST00000370008 TSPY10P0CW01 314 aa23.74■■□□□ 1.39
STXBP3-201ENST00000370008 SENP3-EIF4A1A0A087X0R7 540 aa23.73■■□□□ 1.39
STXBP3-201ENST00000370008 UHRF1BP1Q6BDS2 1440 aa23.73■■□□□ 1.39
STXBP3-201ENST00000370008 NUDCQ9Y266 331 aa23.72■■□□□ 1.39
STXBP3-201ENST00000370008 RALGAPBQ86X10 1494 aa23.72■■□□□ 1.39
STXBP3-201ENST00000370008 ERICH6Q7L0X2 663 aa23.71■■□□□ 1.39
STXBP3-201ENST00000370008 CDC42BPAQ5VT25 1732 aa23.71■■□□□ 1.39
STXBP3-201ENST00000370008 NUP160Q12769 1436 aa23.71■■□□□ 1.39
STXBP3-201ENST00000370008 ATP10BO94823 1461 aa23.7■■□□□ 1.39
STXBP3-201ENST00000370008 ABCC10Q5T3U5 1492 aa23.7■■□□□ 1.39
STXBP3-201ENST00000370008 TMC1Q8TDI8 760 aa23.7■■□□□ 1.38
STXBP3-201ENST00000370008 ROCK2O75116 1388 aaKnown RBP23.7■■□□□ 1.38
STXBP3-201ENST00000370008 HNRNPMP52272 730 aaKnown RBP eCLIP23.7■■□□□ 1.387e-8■□□□□ 10.1
STXBP3-201ENST00000370008 SHANK2Q9UPX8 1470 aa23.69■■□□□ 1.38
STXBP3-201ENST00000370008 PNISRQ8TF01 805 aaKnown RBP23.68■■□□□ 1.38
STXBP3-201ENST00000370008 ST20-MTHFSA0A0A6YYL1 179 aa23.68■■□□□ 1.38
STXBP3-201ENST00000370008 DCAF11Q8TEB1 546 aa23.68■■□□□ 1.38
STXBP3-201ENST00000370008 ABCA8O94911 1581 aa23.67■■□□□ 1.38
STXBP3-201ENST00000370008 KIF15Q9NS87 1388 aa23.66■■□□□ 1.38
STXBP3-201ENST00000370008 ARHGEF12Q9NZN5 1544 aa23.65■■□□□ 1.38
STXBP3-201ENST00000370008 KDM5DQ9BY66 1539 aa23.62■■□□□ 1.37
STXBP3-201ENST00000370008 RNF123Q5XPI4 1314 aa23.61■■□□□ 1.37
STXBP3-201ENST00000370008 CCDC136Q96JN2 1154 aa23.58■■□□□ 1.37
STXBP3-201ENST00000370008 PTPRGP23470 1445 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms