RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 ZNF644Q9H582 1327 aaPredicted RBP21.8■■□□□ 1.08
SYNCRIP-202ENST00000369622 MAGI3Q5TCQ9 1506 aa21.8■■□□□ 1.08
SYNCRIP-202ENST00000369622 EHBP1L1Q8N3D4 1523 aa21.8■■□□□ 1.08
SYNCRIP-202ENST00000369622 SENP3-EIF4A1A0A087X0R7 540 aa21.8■■□□□ 1.08
SYNCRIP-202ENST00000369622 LRRIQ1Q96JM4 1722 aa21.79■■□□□ 1.08
SYNCRIP-202ENST00000369622 B4GALNT3Q6L9W6 998 aa21.78■■□□□ 1.08
SYNCRIP-202ENST00000369622 ZNF777Q9ULD5 760 aaPredicted RBP21.77■■□□□ 1.07
SYNCRIP-202ENST00000369622 SAMD9Q5K651 1589 aa21.77■■□□□ 1.07
SYNCRIP-202ENST00000369622 CDK13Q14004 1512 aaKnown RBP21.76■■□□□ 1.07
SYNCRIP-202ENST00000369622 NBPF8Q3BBV2 869 aa21.75■■□□□ 1.07
SYNCRIP-202ENST00000369622 UGGT2Q9NYU1 1516 aa21.75■■□□□ 1.07
SYNCRIP-202ENST00000369622 PRKRIP1Q9H875 184 aaPredicted RBP21.73■■□□□ 1.07
SYNCRIP-202ENST00000369622 ABCA5Q8WWZ7 1642 aa21.72■■□□□ 1.07
SYNCRIP-202ENST00000369622 KDM6BO15054 1643 aa21.71■■□□□ 1.07
SYNCRIP-202ENST00000369622 KDM5BQ9UGL1 1544 aa21.71■■□□□ 1.07
SYNCRIP-202ENST00000369622 LAMC3Q9Y6N6 1575 aa21.71■■□□□ 1.07
SYNCRIP-202ENST00000369622 EPRSP07814 1512 aaKnown RBP21.71■■□□□ 1.07
SYNCRIP-202ENST00000369622 DENND4BO75064 1496 aaPredicted RBP21.69■■□□□ 1.06
SYNCRIP-202ENST00000369622 PKNOX2Q96KN3 472 aa21.69■■□□□ 1.06
SYNCRIP-202ENST00000369622 CCDC7Q96M83 1385 aa21.67■■□□□ 1.06
SYNCRIP-202ENST00000369622 CNTLNQ9NXG0 1405 aa21.67■■□□□ 1.06
SYNCRIP-202ENST00000369622 FBLN2P98095 1184 aa21.66■■□□□ 1.06
SYNCRIP-202ENST00000369622 KIF7Q2M1P5 1343 aa21.63■■□□□ 1.05
SYNCRIP-202ENST00000369622 THOC2Q8NI27 1593 aaKnown RBP21.63■■□□□ 1.05
SYNCRIP-202ENST00000369622 CFDP1Q9UEE9 299 aaPredicted RBP21.62■■□□□ 1.05
SYNCRIP-202ENST00000369622 HECW1Q76N89 1606 aa21.61■■□□□ 1.05
SYNCRIP-202ENST00000369622 LAS1LQ9Y4W2 734 aaKnown RBP21.61■■□□□ 1.05
SYNCRIP-202ENST00000369622 TCOF1Q13428 1488 aaKnown RBP21.61■■□□□ 1.05
SYNCRIP-202ENST00000369622 PPP4R2Q9NY27 417 aa21.61■■□□□ 1.05
SYNCRIP-202ENST00000369622 BRPF3Q9ULD4 1205 aa21.61■■□□□ 1.05
SYNCRIP-202ENST00000369622 ARHGEF11O15085 1522 aa21.61■■□□□ 1.05
SYNCRIP-202ENST00000369622 MIA2Q96PC5 1412 aa21.6■■□□□ 1.05
SYNCRIP-202ENST00000369622 ANKRD30BQ9BXX2 1392 aa21.59■■□□□ 1.05
SYNCRIP-202ENST00000369622 IQGAP2Q13576 1575 aa21.59■■□□□ 1.05
SYNCRIP-202ENST00000369622 ZBTB47Q9UFB7 747 aaPredicted RBP21.58■■□□□ 1.05
SYNCRIP-202ENST00000369622 DAPK1P53355 1430 aa21.58■■□□□ 1.04
SYNCRIP-202ENST00000369622 KIF21AQ7Z4S6 1674 aa21.57■■□□□ 1.04
SYNCRIP-202ENST00000369622 NCOA1Q15788 1441 aa21.56■■□□□ 1.04
SYNCRIP-202ENST00000369622 NPM2Q86SE8 214 aaKnown RBP21.55■■□□□ 1.04
SYNCRIP-202ENST00000369622 ABCC5O15440 1437 aa21.55■■□□□ 1.04
SYNCRIP-202ENST00000369622 PKD2Q13563 968 aa21.54■■□□□ 1.04
SYNCRIP-202ENST00000369622 KDM2AQ9Y2K7 1162 aa21.54■■□□□ 1.04
SYNCRIP-202ENST00000369622 ANP32AP39687 249 aaKnown RBP21.53■■□□□ 1.04
SYNCRIP-202ENST00000369622 PLEKHG5O94827 1062 aa21.53■■□□□ 1.04
SYNCRIP-202ENST00000369622 ZBED9Q6R2W3 1325 aa21.52■■□□□ 1.04
SYNCRIP-202ENST00000369622 TARBP1Q13395 1621 aaKnown RBP21.52■■□□□ 1.04
SYNCRIP-202ENST00000369622 AKNAQ7Z591 1439 aa21.52■■□□□ 1.04
SYNCRIP-202ENST00000369622 GCC2Q8IWJ2 1684 aa21.52■■□□□ 1.03
SYNCRIP-202ENST00000369622 RPRD2Q5VT52 1461 aaKnown RBP21.51■■□□□ 1.03
SYNCRIP-202ENST00000369622 NEFMP07197 916 aa21.5■■□□□ 1.03
SYNCRIP-202ENST00000369622 ZNF608Q9ULD9 1512 aaPredicted RBP21.49■■□□□ 1.03
SYNCRIP-202ENST00000369622 PRG4Q92954 1404 aaPredicted RBP21.49■■□□□ 1.03
SYNCRIP-202ENST00000369622 CHMP7Q8WUX9 453 aaPredicted RBP21.49■■□□□ 1.03
SYNCRIP-202ENST00000369622 IPO9Q96P70 1041 aaKnown RBP21.49■■□□□ 1.03
SYNCRIP-202ENST00000369622 WDR62O43379 1518 aa21.49■■□□□ 1.03
SYNCRIP-202ENST00000369622 ROCK1Q13464 1354 aa21.46■■□□□ 1.03
SYNCRIP-202ENST00000369622 TMC1Q8TDI8 760 aa21.45■■□□□ 1.02
SYNCRIP-202ENST00000369622 USP47Q96K76 1375 aa21.44■■□□□ 1.02
SYNCRIP-202ENST00000369622 CARD11Q9BXL7 1154 aa21.43■■□□□ 1.02
SYNCRIP-202ENST00000369622 TEX14Q8IWB6 1497 aa21.43■■□□□ 1.02
SYNCRIP-202ENST00000369622 PBRM1Q86U86 1689 aa21.43■■□□□ 1.02
SYNCRIP-202ENST00000369622 NUP153P49790 1475 aaKnown RBP21.42■■□□□ 1.02
SYNCRIP-202ENST00000369622 ADAMTS12P58397 1594 aa21.42■■□□□ 1.02
SYNCRIP-202ENST00000369622 SPATA31E1Q6ZUB1 1445 aa21.4■■□□□ 1.02
SYNCRIP-202ENST00000369622 NUP155O75694 1391 aa21.37■■□□□ 1.01
SYNCRIP-202ENST00000369622 DCAF11Q8TEB1 546 aa21.37■■□□□ 1.01
SYNCRIP-202ENST00000369622 DISP1Q96F81 1524 aa21.37■■□□□ 1.01
SYNCRIP-202ENST00000369622 KIAA0586Q9BVV6 1533 aa21.37■■□□□ 1.01
SYNCRIP-202ENST00000369622 PLB1Q6P1J6 1458 aa21.36■■□□□ 1.01
SYNCRIP-202ENST00000369622 MRC2Q9UBG0 1479 aa21.36■■□□□ 1.01
SYNCRIP-202ENST00000369622 PLEKHD1A6NEE1 506 aa21.36■■□□□ 1.01
SYNCRIP-202ENST00000369622 ST20-MTHFSA0A0A6YYL1 179 aa21.35■■□□□ 1.01
SYNCRIP-202ENST00000369622 TSPY4P0CV99 314 aa21.35■■□□□ 1.01
SYNCRIP-202ENST00000369622 TSPY10P0CW01 314 aa21.35■■□□□ 1.01
SYNCRIP-202ENST00000369622 NUDCQ9Y266 331 aa21.34■■□□□ 1.01
SYNCRIP-202ENST00000369622 DNMT1P26358 1616 aaKnown RBP21.34■■□□□ 1.01
SYNCRIP-202ENST00000369622 PZPP20742 1482 aa21.34■■□□□ 1.01
SYNCRIP-202ENST00000369622 CAMSAP2Q08AD1 1489 aa21.34■■□□□ 1.01
SYNCRIP-202ENST00000369622 ANKRD30AQ9BXX3 1397 aa21.34■■□□□ 1.01
SYNCRIP-202ENST00000369622 TROQ12816 1431 aaPredicted RBP21.33■■□□□ 1
SYNCRIP-202ENST00000369622 KIAA1107Q9UPP5 1409 aa21.33■■□□□ 1
SYNCRIP-202ENST00000369622 HNRNPMP52272 730 aaKnown RBP eCLIP21.32■■□□□ 19e-7■■■■□ 22.9
SYNCRIP-202ENST00000369622 RGL3Q3MIN7 710 aa21.32■■□□□ 1
SYNCRIP-202ENST00000369622 VSIG10Q8N0Z9 540 aa21.32■■□□□ 1
SYNCRIP-202ENST00000369622 JPH4Q96JJ6 628 aa21.32■■□□□ 1
SYNCRIP-202ENST00000369622 DHX29Q7Z478 1369 aaKnown RBP21.31■■□□□ 1
SYNCRIP-202ENST00000369622 KIAA0556O60303 1618 aa21.31■■□□□ 1
SYNCRIP-202ENST00000369622 ANKRD50Q9ULJ7 1429 aa21.3■■□□□ 1
SYNCRIP-202ENST00000369622 GPATCH8Q9UKJ3 1502 aaKnown RBP21.28■■□□□ 1
SYNCRIP-202ENST00000369622 RAPGEF6Q8TEU7 1601 aa21.28■■□□□ 1
SYNCRIP-202ENST00000369622 PNISRQ8TF01 805 aaKnown RBP21.28■■□□□ 1
SYNCRIP-202ENST00000369622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.28■■□□□ 11e-7■■□□□ 13.2
SYNCRIP-202ENST00000369622 GRIN2AQ12879 1464 aa21.27■■□□□ 1
SYNCRIP-202ENST00000369622 IFT140Q96RY7 1462 aa21.27■■□□□ 1
SYNCRIP-202ENST00000369622 ZMYND15Q9H091 742 aa21.25■□□□□ 0.99
SYNCRIP-202ENST00000369622 PODXL2Q9NZ53 605 aa21.25■□□□□ 0.99
SYNCRIP-202ENST00000369622 SMG6Q86US8 1419 aaKnown RBP21.23■□□□□ 0.99
SYNCRIP-202ENST00000369622 KIF14Q15058 1648 aa21.2■□□□□ 0.99
SYNCRIP-202ENST00000369622 BCORL1Q5H9F3 1711 aa21.19■□□□□ 0.98
SYNCRIP-202ENST00000369622 CARMIL2Q6F5E8 1435 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms