RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 ZNF467Q7Z7K2 595 aaPredicted RBP11.53□□□□□ -0.56
ECHDC1-202ENST00000368289 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
ECHDC1-202ENST00000368289 TSPOAP1O95153 1857 aa11.53□□□□□ -0.56
ECHDC1-202ENST00000368289 NUP160Q12769 1436 aa11.52□□□□□ -0.56
ECHDC1-202ENST00000368289 SGIP1Q9BQI5 828 aa11.52□□□□□ -0.57
ECHDC1-202ENST00000368289 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
ECHDC1-202ENST00000368289 HAX1O00165 279 aa11.5□□□□□ -0.57
ECHDC1-202ENST00000368289 VGFO15240 615 aaPredicted RBP11.5□□□□□ -0.57
ECHDC1-202ENST00000368289 RNF25Q96BH1 459 aaPredicted RBP11.49□□□□□ -0.57
ECHDC1-202ENST00000368289 GRIN2AQ12879 1464 aa11.49□□□□□ -0.57
ECHDC1-202ENST00000368289 PPRC1Q5VV67 1664 aaKnown RBP11.46□□□□□ -0.57
ECHDC1-202ENST00000368289 PRG4Q92954 1404 aaPredicted RBP11.46□□□□□ -0.57
ECHDC1-202ENST00000368289 CHGAP10645 457 aaKnown RBP11.46□□□□□ -0.57
ECHDC1-202ENST00000368289 ZNF579Q8NAF0 562 aaKnown RBP11.46□□□□□ -0.57
ECHDC1-202ENST00000368289 KIF12Q96FN5 646 aa11.46□□□□□ -0.57
ECHDC1-202ENST00000368289 PCDHB13Q9Y5F0 798 aa11.46□□□□□ -0.57
ECHDC1-202ENST00000368289 ADCY10Q96PN6 1610 aa11.46□□□□□ -0.58
ECHDC1-202ENST00000368289 POTEHQ6S545 545 aa11.45□□□□□ -0.58
ECHDC1-202ENST00000368289 CLCN6P51797 869 aa11.44□□□□□ -0.58
ECHDC1-202ENST00000368289 BBXQ8WY36 941 aaPredicted RBP11.44□□□□□ -0.58
ECHDC1-202ENST00000368289 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.44□□□□□ -0.58
ECHDC1-202ENST00000368289 MAP3K13O43283 966 aa11.43□□□□□ -0.58
ECHDC1-202ENST00000368289 PBRM1Q86U86 1689 aa11.43□□□□□ -0.58
ECHDC1-202ENST00000368289 CUX1P39880 1505 aa11.42□□□□□ -0.58
ECHDC1-202ENST00000368289 HS6ST3Q8IZP7 471 aa11.42□□□□□ -0.58
ECHDC1-202ENST00000368289 PDAP1Q13442 181 aaKnown RBP11.41□□□□□ -0.58
ECHDC1-202ENST00000368289 PHF12Q96QT6 1004 aa11.41□□□□□ -0.58
ECHDC1-202ENST00000368289 CERKQ8TCT0 537 aa11.4□□□□□ -0.58
ECHDC1-202ENST00000368289 JPH4Q96JJ6 628 aa11.4□□□□□ -0.58
ECHDC1-202ENST00000368289 PCDHB8Q9UN66 801 aa11.4□□□□□ -0.58
ECHDC1-202ENST00000368289 STK25O00506 426 aa11.39□□□□□ -0.59
ECHDC1-202ENST00000368289 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.38□□□□□ -0.59
ECHDC1-202ENST00000368289 ZFP91Q96JP5 570 aaPredicted RBP11.38□□□□□ -0.59
ECHDC1-202ENST00000368289 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
ECHDC1-202ENST00000368289 SPATA31D1Q6ZQQ2 1576 aa11.37□□□□□ -0.59
ECHDC1-202ENST00000368289 IFNL1Q8IU54 200 aa11.37□□□□□ -0.59
ECHDC1-202ENST00000368289 PSEN1P49768 467 aa11.35□□□□□ -0.59
ECHDC1-202ENST00000368289 STK24Q9Y6E0 443 aa11.35□□□□□ -0.59
ECHDC1-202ENST00000368289 ADAMTS12P58397 1594 aa11.34□□□□□ -0.59
ECHDC1-202ENST00000368289 BCL11BQ9C0K0 894 aaPredicted RBP11.33□□□□□ -0.6
ECHDC1-202ENST00000368289 ABCA10Q8WWZ4 1543 aa11.33□□□□□ -0.6
ECHDC1-202ENST00000368289 TOP2BQ02880 1626 aa11.32□□□□□ -0.6
ECHDC1-202ENST00000368289 PLCB2Q00722 1185 aa11.31□□□□□ -0.6
ECHDC1-202ENST00000368289 GLI2P10070 1586 aa11.3□□□□□ -0.6
ECHDC1-202ENST00000368289 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
ECHDC1-202ENST00000368289 PTPRMP28827 1452 aa11.3□□□□□ -0.6
ECHDC1-202ENST00000368289 EVX2Q03828 476 aa11.29□□□□□ -0.6
ECHDC1-202ENST00000368289 SLC24A1O60721 1099 aa11.28□□□□□ -0.6
ECHDC1-202ENST00000368289 SPRYD3Q8NCJ5 442 aa11.28□□□□□ -0.6
ECHDC1-202ENST00000368289 PCF11O94913 1555 aaKnown RBP11.28□□□□□ -0.6
ECHDC1-202ENST00000368289 SRCAPQ6ZRS2 3230 aa11.28□□□□□ -0.6
ECHDC1-202ENST00000368289 FHAD1B1AJZ9 1412 aa11.27□□□□□ -0.6
ECHDC1-202ENST00000368289 ASXL2Q76L83 1435 aa11.27□□□□□ -0.6
ECHDC1-202ENST00000368289 HSPA2P54652 639 aa11.27□□□□□ -0.61
ECHDC1-202ENST00000368289 RYDENQ9NUL5 291 aaKnown RBP11.27□□□□□ -0.61
ECHDC1-202ENST00000368289 PAXIP1Q6ZW49 1069 aaPredicted RBP11.26□□□□□ -0.61
ECHDC1-202ENST00000368289 CFAP44Q96MT7 982 aa11.25□□□□□ -0.61
ECHDC1-202ENST00000368289 TIE1P35590 1138 aa11.24□□□□□ -0.61
ECHDC1-202ENST00000368289 GOLGA2Q08379 1002 aa11.22□□□□□ -0.61
ECHDC1-202ENST00000368289 TMEM106CQ9BVX2 250 aa11.22□□□□□ -0.61
ECHDC1-202ENST00000368289 EPRSP07814 1512 aaKnown RBP11.21□□□□□ -0.61
ECHDC1-202ENST00000368289 GALR2O43603 387 aaPredicted RBP11.21□□□□□ -0.61
ECHDC1-202ENST00000368289 ADAMTSL3P82987 1691 aa11.2□□□□□ -0.62
ECHDC1-202ENST00000368289 KIF21BO75037 1637 aa11.2□□□□□ -0.62
ECHDC1-202ENST00000368289 MAP3K4Q9Y6R4 1608 aa11.2□□□□□ -0.62
ECHDC1-202ENST00000368289 RUSC2Q8N2Y8 1516 aa11.2□□□□□ -0.62
ECHDC1-202ENST00000368289 PLB1Q6P1J6 1458 aa11.2□□□□□ -0.62
ECHDC1-202ENST00000368289 CABP2Q9NPB3 220 aa11.2□□□□□ -0.62
ECHDC1-202ENST00000368289 ABCC2Q92887 1545 aa11.19□□□□□ -0.62
ECHDC1-202ENST00000368289 SOX12O15370 315 aa11.18□□□□□ -0.62
ECHDC1-202ENST00000368289 GABBR2O75899 941 aa11.18□□□□□ -0.62
ECHDC1-202ENST00000368289 NKX1-1Q15270 411 aaPredicted RBP11.17□□□□□ -0.62
ECHDC1-202ENST00000368289 TRPC6Q9Y210 931 aa11.17□□□□□ -0.62
ECHDC1-202ENST00000368289 HAP1P54257 671 aaPredicted RBP11.16□□□□□ -0.62
ECHDC1-202ENST00000368289 MKRN3Q13064 507 aaKnown RBP11.15□□□□□ -0.62
ECHDC1-202ENST00000368289 TEX14Q8IWB6 1497 aa11.14□□□□□ -0.63
ECHDC1-202ENST00000368289 TTLL13PA6NNM8 815 aa11.14□□□□□ -0.63
ECHDC1-202ENST00000368289 EFCAB3Q8N7B9 438 aa11.14□□□□□ -0.63
ECHDC1-202ENST00000368289 BMP2KQ9NSY1 1161 aaPredicted RBP11.14□□□□□ -0.63
ECHDC1-202ENST00000368289 PTPRGP23470 1445 aa11.14□□□□□ -0.63
ECHDC1-202ENST00000368289 GTPBP6O43824 516 aaPredicted RBP11.13□□□□□ -0.63
ECHDC1-202ENST00000368289 NLRP6P59044 892 aa11.12□□□□□ -0.63
ECHDC1-202ENST00000368289 ERICH3Q5RHP9 1530 aa11.11□□□□□ -0.63
ECHDC1-202ENST00000368289 SP7Q8TDD2 431 aaPredicted RBP11.11□□□□□ -0.63
ECHDC1-202ENST00000368289 DCBLD2Q96PD2 775 aa11.11□□□□□ -0.63
ECHDC1-202ENST00000368289 TTBK1Q5TCY1 1321 aaPredicted RBP11.1□□□□□ -0.63
ECHDC1-202ENST00000368289 MADDQ8WXG6 1647 aa11.09□□□□□ -0.63
ECHDC1-202ENST00000368289 TRIM35Q9UPQ4 493 aa11.09□□□□□ -0.63
ECHDC1-202ENST00000368289 ASTLQ6HA08 431 aaPredicted RBP11.08□□□□□ -0.64
ECHDC1-202ENST00000368289 MFRPQ9BY79 579 aa11.08□□□□□ -0.64
ECHDC1-202ENST00000368289 CUL7Q14999 1698 aa11.08□□□□□ -0.64
ECHDC1-202ENST00000368289 UHRF1BP1LA0JNW5 1464 aa11.07□□□□□ -0.64
ECHDC1-202ENST00000368289 ATMINO43313 823 aaPredicted RBP11.07□□□□□ -0.64
ECHDC1-202ENST00000368289 KIAA0586Q9BVV6 1533 aa11.06□□□□□ -0.64
ECHDC1-202ENST00000368289 KDM5BQ9UGL1 1544 aa11.06□□□□□ -0.64
ECHDC1-202ENST00000368289 WRNQ14191 1432 aaPredicted RBP eCLIP11.06□□□□□ -0.64
ECHDC1-202ENST00000368289 MAGI3Q5TCQ9 1506 aa11.05□□□□□ -0.64
ECHDC1-202ENST00000368289 ATN1P54259 1190 aaPredicted RBP11.05□□□□□ -0.64
ECHDC1-202ENST00000368289 PHF8Q9UPP1 1060 aa11.05□□□□□ -0.64
ECHDC1-202ENST00000368289 VSIG10Q8N0Z9 540 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms