RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 KIF14Q15058 1648 aa18.16■□□□□ 0.5
USF1-203ENST00000368021 TTC37Q6PGP7 1564 aa18.15■□□□□ 0.5
USF1-203ENST00000368021 TCOF1Q13428 1488 aaKnown RBP18.15■□□□□ 0.5
USF1-203ENST00000368021 KDM6BO15054 1643 aa18.14■□□□□ 0.5
USF1-203ENST00000368021 FAM50AQ14320 339 aaKnown RBP18.14■□□□□ 0.5
USF1-203ENST00000368021 PTPN23Q9H3S7 1636 aa18.14■□□□□ 0.49
USF1-203ENST00000368021 COL17A1Q9UMD9 1497 aaPredicted RBP18.14■□□□□ 0.49
USF1-203ENST00000368021 ITSN2Q9NZM3 1697 aa18.12■□□□□ 0.49
USF1-203ENST00000368021 GPATCH8Q9UKJ3 1502 aaKnown RBP18.1■□□□□ 0.49
USF1-203ENST00000368021 FANCAO15360 1455 aa18.08■□□□□ 0.48
USF1-203ENST00000368021 RAPGEF3O95398 923 aa18.08■□□□□ 0.48
USF1-203ENST00000368021 PLCH2O75038 1416 aa18.08■□□□□ 0.48
USF1-203ENST00000368021 HRCP23327 699 aa18.06■□□□□ 0.48
USF1-203ENST00000368021 CDC42BPAQ5VT25 1732 aa18.05■□□□□ 0.48
USF1-203ENST00000368021 EFCAB2Q5VUJ9 269 aa18.05■□□□□ 0.48
USF1-203ENST00000368021 ITGAEP38570 1179 aa18.05■□□□□ 0.48
USF1-203ENST00000368021 AKNAQ7Z591 1439 aa18.04■□□□□ 0.48
USF1-203ENST00000368021 ZNF777Q9ULD5 760 aaPredicted RBP18.04■□□□□ 0.48
USF1-203ENST00000368021 NEO1Q92859 1461 aa18.04■□□□□ 0.48
USF1-203ENST00000368021 CFDP1Q9UEE9 299 aaPredicted RBP18.03■□□□□ 0.48
USF1-203ENST00000368021 ARHGAP5Q13017 1502 aa18.03■□□□□ 0.48
USF1-203ENST00000368021 MYO5CQ9NQX4 1742 aa18.02■□□□□ 0.48
USF1-203ENST00000368021 ARAP3Q8WWN8 1544 aa18■□□□□ 0.47
USF1-203ENST00000368021 PREX2Q70Z35 1606 aa18■□□□□ 0.47
USF1-203ENST00000368021 CAMSAP2Q08AD1 1489 aa18■□□□□ 0.47
USF1-203ENST00000368021 PTPRKQ15262 1439 aa17.99■□□□□ 0.47
USF1-203ENST00000368021 ADGRL1O94910 1474 aa17.98■□□□□ 0.47
USF1-203ENST00000368021 SCAPERQ9BY12 1400 aa17.98■□□□□ 0.47
USF1-203ENST00000368021 DNMT1P26358 1616 aaKnown RBP17.98■□□□□ 0.47
USF1-203ENST00000368021 SETD5Q9C0A6 1442 aa17.98■□□□□ 0.47
USF1-203ENST00000368021 CDC42BPBQ9Y5S2 1711 aa17.97■□□□□ 0.47
USF1-203ENST00000368021 CCER1Q8TC90 406 aaPredicted RBP17.96■□□□□ 0.47
USF1-203ENST00000368021 DENND4BO75064 1496 aaPredicted RBP17.96■□□□□ 0.47
USF1-203ENST00000368021 ZNF644Q9H582 1327 aaPredicted RBP17.96■□□□□ 0.47
USF1-203ENST00000368021 ZEB1P37275 1124 aaPredicted RBP17.95■□□□□ 0.46
USF1-203ENST00000368021 HFM1A2PYH4 1435 aa17.95■□□□□ 0.46
USF1-203ENST00000368021 DAPK1P53355 1430 aa17.95■□□□□ 0.46
USF1-203ENST00000368021 AFAP1Q8N556 730 aa17.95■□□□□ 0.46
USF1-203ENST00000368021 CFAP74Q9C0B2 1584 aa17.95■□□□□ 0.46
USF1-203ENST00000368021 RAB3GAP2Q9H2M9 1393 aa17.94■□□□□ 0.46
USF1-203ENST00000368021 ABCC5O15440 1437 aa17.93■□□□□ 0.46
USF1-203ENST00000368021 HNRNPMP52272 730 aaKnown RBP eCLIP17.92■□□□□ 0.46
USF1-203ENST00000368021 MYT1LQ9UL68 1186 aa17.91■□□□□ 0.46
USF1-203ENST00000368021 ROCK1Q13464 1354 aa17.91■□□□□ 0.46
USF1-203ENST00000368021 NAIPQ13075 1403 aa17.9■□□□□ 0.46
USF1-203ENST00000368021 FRMPD1Q5SYB0 1578 aa17.89■□□□□ 0.46
USF1-203ENST00000368021 SAMD9LQ8IVG5 1584 aa17.89■□□□□ 0.46
USF1-203ENST00000368021 CROCC2H7BZ55 1655 aa17.89■□□□□ 0.45
USF1-203ENST00000368021 ARHGEF5Q12774 1597 aa17.89■□□□□ 0.45
USF1-203ENST00000368021 ARHGEF12Q9NZN5 1544 aa17.89■□□□□ 0.45
USF1-203ENST00000368021 POGZQ7Z3K3 1410 aa17.88■□□□□ 0.45
USF1-203ENST00000368021 PLEKHH2Q8IVE3 1493 aa17.88■□□□□ 0.45
USF1-203ENST00000368021 SHANK2Q9UPX8 1470 aa17.88■□□□□ 0.45
USF1-203ENST00000368021 GCC2Q8IWJ2 1684 aa17.87■□□□□ 0.45
USF1-203ENST00000368021 RICTORQ6R327 1708 aa17.87■□□□□ 0.45
USF1-203ENST00000368021 TRAPPC8Q9Y2L5 1435 aa17.87■□□□□ 0.45
USF1-203ENST00000368021 MBD5Q9P267 1494 aa17.87■□□□□ 0.45
USF1-203ENST00000368021 KIAA1107Q9UPP5 1409 aa17.87■□□□□ 0.45
USF1-203ENST00000368021 RSPH4AQ5TD94 716 aa17.86■□□□□ 0.45
USF1-203ENST00000368021 DHX57Q6P158 1386 aaKnown RBP17.86■□□□□ 0.45
USF1-203ENST00000368021 CLSPNQ9HAW4 1339 aa17.86■□□□□ 0.45
USF1-203ENST00000368021 ADGRL2O95490 1459 aa17.85■□□□□ 0.45
USF1-203ENST00000368021 ABCC1P33527 1531 aa17.85■□□□□ 0.45
USF1-203ENST00000368021 ZNF518AQ6AHZ1 1483 aa17.85■□□□□ 0.45
USF1-203ENST00000368021 SYCP2Q9BX26 1530 aa17.84■□□□□ 0.45
USF1-203ENST00000368021 CHIC2Q9UKJ5 165 aa17.84■□□□□ 0.45
USF1-203ENST00000368021 ADGBQ8N7X0 1667 aa17.84■□□□□ 0.45
USF1-203ENST00000368021 YEATS2Q9ULM3 1422 aa17.84■□□□□ 0.45
USF1-203ENST00000368021 ARID4BQ4LE39 1312 aaPredicted RBP17.83■□□□□ 0.44
USF1-203ENST00000368021 CCDC141Q6ZP82 1450 aa17.83■□□□□ 0.44
USF1-203ENST00000368021 NCOA1Q15788 1441 aa17.82■□□□□ 0.44
USF1-203ENST00000368021 ACIN1Q9UKV3 1341 aaKnown RBP17.81■□□□□ 0.44
USF1-203ENST00000368021 RRP7BPQ9NSQ0 103 aa17.81■□□□□ 0.44
USF1-203ENST00000368021 C9orf84Q5VXU9 1444 aa17.8■□□□□ 0.44
USF1-203ENST00000368021 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
USF1-203ENST00000368021 KDM4FA0A1W2PPD8 638 aa17.79■□□□□ 0.44
USF1-203ENST00000368021 TSPY4P0CV99 314 aa17.79■□□□□ 0.44
USF1-203ENST00000368021 TSPY10P0CW01 314 aa17.79■□□□□ 0.44
USF1-203ENST00000368021 ZMYM4Q5VZL5 1548 aa17.79■□□□□ 0.44
USF1-203ENST00000368021 SPAG9O60271 1321 aaKnown RBP17.78■□□□□ 0.44
USF1-203ENST00000368021 ZFYVE16Q7Z3T8 1539 aa17.78■□□□□ 0.44
USF1-203ENST00000368021 MAST1Q9Y2H9 1570 aa17.78■□□□□ 0.44
USF1-203ENST00000368021 MAGI2Q86UL8 1455 aa17.77■□□□□ 0.43
USF1-203ENST00000368021 KDM5CP41229 1560 aa17.76■□□□□ 0.43
USF1-203ENST00000368021 ARHGEF40Q8TER5 1519 aa17.75■□□□□ 0.43
USF1-203ENST00000368021 MLECQ14165 292 aa17.75■□□□□ 0.43
USF1-203ENST00000368021 AEBP2Q6ZN18 517 aaPredicted RBP17.74■□□□□ 0.43
USF1-203ENST00000368021 MLH3Q9UHC1 1453 aa17.74■□□□□ 0.43
USF1-203ENST00000368021 HECW2Q9P2P5 1572 aa17.74■□□□□ 0.43
USF1-203ENST00000368021 ATP10AO60312 1499 aa17.72■□□□□ 0.43
USF1-203ENST00000368021 PLXNC1O60486 1568 aa17.7■□□□□ 0.42
USF1-203ENST00000368021 KIDINS220Q9ULH0 1771 aa17.69■□□□□ 0.42
USF1-203ENST00000368021 ANKRD50Q9ULJ7 1429 aa17.69■□□□□ 0.42
USF1-203ENST00000368021 KIF15Q9NS87 1388 aa17.69■□□□□ 0.42
USF1-203ENST00000368021 ABCA6Q8N139 1617 aa17.68■□□□□ 0.42
USF1-203ENST00000368021 SIGLEC1Q9BZZ2 1709 aa17.68■□□□□ 0.42
USF1-203ENST00000368021 DIP2CQ9Y2E4 1556 aa17.68■□□□□ 0.42
USF1-203ENST00000368021 ATP7AQ04656 1500 aa17.67■□□□□ 0.42
USF1-203ENST00000368021 RTEL1-TNFRSF6BF6WH68 1400 aa17.67■□□□□ 0.42
USF1-203ENST00000368021 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms