RNA–Protein interactions for RNA: ENST00000367537.7

SMG7-202, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMG7, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-202ENST00000367537 HDGFP51858 240 aaKnown RBP10.98□□□□□ -0.65
SMG7-202ENST00000367537 NBPF8Q3BBV2 869 aa10.97□□□□□ -0.65
SMG7-202ENST00000367537 POGKQ9P215 609 aa10.97□□□□□ -0.65
SMG7-202ENST00000367537 PKD2Q13563 968 aa10.96□□□□□ -0.65
SMG7-202ENST00000367537 PPP4R2Q9NY27 417 aa10.96□□□□□ -0.65
SMG7-202ENST00000367537 ARID4BQ4LE39 1312 aaPredicted RBP10.96□□□□□ -0.65
SMG7-202ENST00000367537 C14orf37Q86TY3 774 aa10.96□□□□□ -0.66
SMG7-202ENST00000367537 DCAF11Q8TEB1 546 aa10.95□□□□□ -0.66
SMG7-202ENST00000367537 FTSJ3Q8IY81 847 aaKnown RBP10.94□□□□□ -0.66
SMG7-202ENST00000367537 GOLGA6L22H0YM25 854 aa10.94□□□□□ -0.66
SMG7-202ENST00000367537 RSPH4AQ5TD94 716 aa10.94□□□□□ -0.66
SMG7-202ENST00000367537 CASC1Q6TDU7 716 aa10.93□□□□□ -0.66
SMG7-202ENST00000367537 ANKRD30AQ9BXX3 1397 aa10.93□□□□□ -0.66
SMG7-202ENST00000367537 PTPRKQ15262 1439 aa10.92□□□□□ -0.66
SMG7-202ENST00000367537 AQRO60306 1485 aaKnown RBP eCLIP10.92□□□□□ -0.661e-6■■■■□ 20.5
SMG7-202ENST00000367537 PRKRIP1Q9H875 184 aaPredicted RBP10.92□□□□□ -0.66
SMG7-202ENST00000367537 EFCAB2Q5VUJ9 269 aa10.92□□□□□ -0.66
SMG7-202ENST00000367537 HAP1P54257 671 aaPredicted RBP10.92□□□□□ -0.66
SMG7-202ENST00000367537 CCDC18Q5T9S5 1454 aa10.91□□□□□ -0.66
SMG7-202ENST00000367537 FGD6Q6ZV73 1430 aa10.91□□□□□ -0.66
SMG7-202ENST00000367537 NCLP19338 710 aaKnown RBP10.91□□□□□ -0.66
SMG7-202ENST00000367537 CC2D1BQ5T0F9 858 aaKnown RBP10.91□□□□□ -0.66
SMG7-202ENST00000367537 PPM1GO15355 546 aaPredicted RBP10.9□□□□□ -0.66
SMG7-202ENST00000367537 HNRNPMP52272 730 aaKnown RBP eCLIP10.9□□□□□ -0.662e-6■□□□□ 8.9
SMG7-202ENST00000367537 ERICH6BQ5W0A0 696 aa10.9□□□□□ -0.66
SMG7-202ENST00000367537 MAPKBP1O60336 1514 aa10.88□□□□□ -0.67
SMG7-202ENST00000367537 ERICH3Q5RHP9 1530 aa10.88□□□□□ -0.67
SMG7-202ENST00000367537 ST20-MTHFSA0A0A6YYL1 179 aa10.88□□□□□ -0.67
SMG7-202ENST00000367537 KTN1Q86UP2 1357 aaKnown RBP10.87□□□□□ -0.67
SMG7-202ENST00000367537 ZBTB7CA1YPR0 619 aa10.87□□□□□ -0.67
SMG7-202ENST00000367537 POLA1P09884 1462 aaPredicted RBP10.86□□□□□ -0.67
SMG7-202ENST00000367537 SKAP1Q86WV1 359 aa10.86□□□□□ -0.67
SMG7-202ENST00000367537 RALBP1Q15311 655 aa10.86□□□□□ -0.67
SMG7-202ENST00000367537 GLIPR1L2Q4G1C9 344 aa10.86□□□□□ -0.67
SMG7-202ENST00000367537 CFAP44Q96MT7 982 aa10.86□□□□□ -0.67
SMG7-202ENST00000367537 NUP155O75694 1391 aa10.86□□□□□ -0.67
SMG7-202ENST00000367537 MSH5O43196 834 aa10.85□□□□□ -0.67
SMG7-202ENST00000367537 KIF7Q2M1P5 1343 aa10.85□□□□□ -0.67
SMG7-202ENST00000367537 PLIN1O60240 522 aa10.85□□□□□ -0.67
SMG7-202ENST00000367537 EIF3AQ14152 1382 aaKnown RBP10.85□□□□□ -0.67
SMG7-202ENST00000367537 TIAM1Q13009 1591 aa10.84□□□□□ -0.67
SMG7-202ENST00000367537 NEUROD2Q15784 382 aa10.84□□□□□ -0.67
SMG7-202ENST00000367537 PEG3Q9GZU2 1588 aa10.84□□□□□ -0.67
SMG7-202ENST00000367537 MORC1Q86VD1 984 aa10.84□□□□□ -0.67
SMG7-202ENST00000367537 NCOA2Q15596 1464 aa10.83□□□□□ -0.68
SMG7-202ENST00000367537 ROCK2O75116 1388 aaKnown RBP10.83□□□□□ -0.68
SMG7-202ENST00000367537 U2SURPO15042 1029 aaKnown RBP10.83□□□□□ -0.68
SMG7-202ENST00000367537 NAIPQ13075 1403 aa10.83□□□□□ -0.68
SMG7-202ENST00000367537 TNNT2P45379 298 aaPredicted RBP10.82□□□□□ -0.68
SMG7-202ENST00000367537 SRPK2P78362 688 aaKnown RBP10.82□□□□□ -0.68
SMG7-202ENST00000367537 HDGFL2Q7Z4V5 671 aaPredicted RBP10.82□□□□□ -0.68
SMG7-202ENST00000367537 GAPVD1Q14C86 1478 aa10.82□□□□□ -0.68
SMG7-202ENST00000367537 CALD1Q05682 793 aaKnown RBP10.81□□□□□ -0.68
SMG7-202ENST00000367537 FRAT1Q92837 279 aaPredicted RBP10.81□□□□□ -0.68
SMG7-202ENST00000367537 TRIM44Q96DX7 344 aaPredicted RBP10.81□□□□□ -0.68
SMG7-202ENST00000367537 JPH4Q96JJ6 628 aa10.81□□□□□ -0.68
SMG7-202ENST00000367537 LAS1LQ9Y4W2 734 aaKnown RBP10.81□□□□□ -0.68
SMG7-202ENST00000367537 CHMP4AQ9BY43 222 aa10.81□□□□□ -0.68
SMG7-202ENST00000367537 UACAQ9BZF9 1416 aa10.8□□□□□ -0.68
SMG7-202ENST00000367537 A0A0G2JS52 829 aa10.8□□□□□ -0.68
SMG7-202ENST00000367537 MYOM3Q5VTT5 1437 aa10.8□□□□□ -0.68
SMG7-202ENST00000367537 PCF11O94913 1555 aaKnown RBP10.8□□□□□ -0.68
SMG7-202ENST00000367537 TOPBP1Q92547 1522 aa10.8□□□□□ -0.68
SMG7-202ENST00000367537 CASKIN1Q8WXD9 1431 aa10.8□□□□□ -0.68
SMG7-202ENST00000367537 GGT6Q6P531 493 aa10.79□□□□□ -0.68
SMG7-202ENST00000367537 NBPF1Q3BBV0 1214 aa10.79□□□□□ -0.68
SMG7-202ENST00000367537 IPO8O15397 1037 aaKnown RBP10.78□□□□□ -0.68
SMG7-202ENST00000367537 CDCA7LQ96GN5 454 aa10.78□□□□□ -0.68
SMG7-202ENST00000367537 ZRSR1Q15695 479 aaKnown RBP10.78□□□□□ -0.68
SMG7-202ENST00000367537 RTN4Q9NQC3 1192 aaKnown RBP10.78□□□□□ -0.68
SMG7-202ENST00000367537 CCDC7Q96M83 1385 aa10.77□□□□□ -0.69
SMG7-202ENST00000367537 CDK13Q14004 1512 aaKnown RBP10.77□□□□□ -0.69
SMG7-202ENST00000367537 PAK3O75914 559 aaPredicted RBP10.77□□□□□ -0.69
SMG7-202ENST00000367537 CDK11BP21127 795 aaKnown RBP10.77□□□□□ -0.69
SMG7-202ENST00000367537 RGS3P49796 1198 aa10.77□□□□□ -0.69
SMG7-202ENST00000367537 AKNAQ7Z591 1439 aa10.77□□□□□ -0.69
SMG7-202ENST00000367537 SPAG9O60271 1321 aaKnown RBP10.77□□□□□ -0.69
SMG7-202ENST00000367537 PDE3BQ13370 1112 aa10.76□□□□□ -0.69
SMG7-202ENST00000367537 EXOC6Q8TAG9 804 aa10.75□□□□□ -0.69
SMG7-202ENST00000367537 CC2D2AQ9P2K1 1620 aa10.75□□□□□ -0.69
SMG7-202ENST00000367537 LMOD2Q6P5Q4 547 aa10.75□□□□□ -0.69
SMG7-202ENST00000367537 NOP58Q9Y2X3 529 aaKnown RBP10.75□□□□□ -0.69
SMG7-202ENST00000367537 PRG4Q92954 1404 aaPredicted RBP10.75□□□□□ -0.69
SMG7-202ENST00000367537 ARXQ96QS3 562 aa10.74□□□□□ -0.69
SMG7-202ENST00000367537 HFM1A2PYH4 1435 aa10.74□□□□□ -0.69
SMG7-202ENST00000367537 NLRP13Q86W25 1043 aa10.74□□□□□ -0.69
SMG7-202ENST00000367537 PLEKHG5O94827 1062 aa10.74□□□□□ -0.69
SMG7-202ENST00000367537 SLC4A3P48751 1232 aa10.74□□□□□ -0.69
SMG7-202ENST00000367537 RTF1Q92541 710 aaKnown RBP10.74□□□□□ -0.69
SMG7-202ENST00000367537 KIF3BO15066 747 aa10.73□□□□□ -0.69
SMG7-202ENST00000367537 OS9Q13438 667 aaPredicted RBP10.73□□□□□ -0.69
SMG7-202ENST00000367537 TERF2IPQ9NYB0 399 aa10.73□□□□□ -0.69
SMG7-202ENST00000367537 USP47Q96K76 1375 aa10.73□□□□□ -0.69
SMG7-202ENST00000367537 HMGXB3Q12766 1538 aa10.73□□□□□ -0.69
SMG7-202ENST00000367537 NUTM2DQ5VT03 806 aaPredicted RBP10.72□□□□□ -0.69
SMG7-202ENST00000367537 RCAN3Q9UKA8 241 aa10.72□□□□□ -0.69
SMG7-202ENST00000367537 BIVM-ERCC5R4GMW8 1640 aa10.72□□□□□ -0.69
SMG7-202ENST00000367537 MCCP23508 829 aa10.72□□□□□ -0.69
SMG7-202ENST00000367537 CCDC146Q8IYE0 955 aa10.72□□□□□ -0.69
SMG7-202ENST00000367537 HSP90AB1P08238 724 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms