RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 P3H3Q8IVL6 736 aa16.7■□□□□ 0.26
NUP43-203ENST00000367404 ARID3CA6NKF2 412 aa16.69■□□□□ 0.26
NUP43-203ENST00000367404 FAM9AQ8IZU1 332 aaPredicted RBP16.69■□□□□ 0.26
NUP43-203ENST00000367404 NUP153P49790 1475 aaKnown RBP16.68■□□□□ 0.26
NUP43-203ENST00000367404 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
NUP43-203ENST00000367404 FRMPD1Q5SYB0 1578 aa16.67■□□□□ 0.26
NUP43-203ENST00000367404 ADAMTSL3P82987 1691 aa16.65■□□□□ 0.26
NUP43-203ENST00000367404 EEA1Q15075 1411 aa16.65■□□□□ 0.26
NUP43-203ENST00000367404 PTPRMP28827 1452 aa16.64■□□□□ 0.25
NUP43-203ENST00000367404 FHOD3Q2V2M9 1422 aa16.62■□□□□ 0.25
NUP43-203ENST00000367404 RAPGEF3O95398 923 aa16.62■□□□□ 0.25
NUP43-203ENST00000367404 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
NUP43-203ENST00000367404 BCORL1Q5H9F3 1711 aa16.58■□□□□ 0.24
NUP43-203ENST00000367404 EFCAB5A4FU69 1503 aa16.57■□□□□ 0.24
NUP43-203ENST00000367404 MADDQ8WXG6 1647 aa16.56■□□□□ 0.24
NUP43-203ENST00000367404 DENND4BO75064 1496 aaPredicted RBP16.55■□□□□ 0.24
NUP43-203ENST00000367404 AKNAQ7Z591 1439 aa16.54■□□□□ 0.24
NUP43-203ENST00000367404 CFAP74Q9C0B2 1584 aa16.54■□□□□ 0.24
NUP43-203ENST00000367404 ZMYM4Q5VZL5 1548 aa16.54■□□□□ 0.24
NUP43-203ENST00000367404 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.54■□□□□ 0.24
NUP43-203ENST00000367404 FANCAO15360 1455 aa16.54■□□□□ 0.24
NUP43-203ENST00000367404 RICTORQ6R327 1708 aa16.53■□□□□ 0.24
NUP43-203ENST00000367404 PCF11O94913 1555 aaKnown RBP16.53■□□□□ 0.24
NUP43-203ENST00000367404 PLEKHD1A6NEE1 506 aa16.52■□□□□ 0.24
NUP43-203ENST00000367404 RBM42Q9BTD8 480 aaKnown RBP16.52■□□□□ 0.24
NUP43-203ENST00000367404 LMTK3Q96Q04 1460 aa16.52■□□□□ 0.23
NUP43-203ENST00000367404 TTC37Q6PGP7 1564 aa16.51■□□□□ 0.23
NUP43-203ENST00000367404 ZBTB12Q9Y330 459 aaPredicted RBP16.5■□□□□ 0.23
NUP43-203ENST00000367404 ARID4BQ4LE39 1312 aaPredicted RBP16.48■□□□□ 0.23
NUP43-203ENST00000367404 FBXO41Q8TF61 875 aa16.48■□□□□ 0.23
NUP43-203ENST00000367404 MAGI2Q86UL8 1455 aa16.48■□□□□ 0.23
NUP43-203ENST00000367404 CDK13Q14004 1512 aaKnown RBP16.47■□□□□ 0.23
NUP43-203ENST00000367404 ZFYVE16Q7Z3T8 1539 aa16.47■□□□□ 0.23
NUP43-203ENST00000367404 RANGAP1P46060 587 aaPredicted RBP16.47■□□□□ 0.23
NUP43-203ENST00000367404 YEATS2Q9ULM3 1422 aa16.46■□□□□ 0.23
NUP43-203ENST00000367404 RIMS1Q86UR5 1692 aaKnown RBP16.45■□□□□ 0.22
NUP43-203ENST00000367404 PLCH2O75038 1416 aa16.45■□□□□ 0.22
NUP43-203ENST00000367404 POGZQ7Z3K3 1410 aa16.45■□□□□ 0.22
NUP43-203ENST00000367404 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
NUP43-203ENST00000367404 SIGLEC1Q9BZZ2 1709 aa16.44■□□□□ 0.22
NUP43-203ENST00000367404 HECW1Q76N89 1606 aa16.42■□□□□ 0.22
NUP43-203ENST00000367404 FMN1Q68DA7 1419 aa16.4■□□□□ 0.22
NUP43-203ENST00000367404 SCAPERQ9BY12 1400 aa16.4■□□□□ 0.22
NUP43-203ENST00000367404 ARHGAP35Q9NRY4 1499 aa16.38■□□□□ 0.21
NUP43-203ENST00000367404 ARHGEF12Q9NZN5 1544 aa16.37■□□□□ 0.21
NUP43-203ENST00000367404 C9orf84Q5VXU9 1444 aa16.36■□□□□ 0.21
NUP43-203ENST00000367404 ATP10AO60312 1499 aa16.35■□□□□ 0.21
NUP43-203ENST00000367404 TROQ12816 1431 aaPredicted RBP16.34■□□□□ 0.21
NUP43-203ENST00000367404 HSPA2P54652 639 aa16.33■□□□□ 0.2
NUP43-203ENST00000367404 EFCAB2Q5VUJ9 269 aa16.33■□□□□ 0.2
NUP43-203ENST00000367404 KDM5CP41229 1560 aa16.33■□□□□ 0.2
NUP43-203ENST00000367404 KIF14Q15058 1648 aa16.33■□□□□ 0.2
NUP43-203ENST00000367404 FER1L4A9Z1Z3 1794 aa16.32■□□□□ 0.2
NUP43-203ENST00000367404 ZNF518AQ6AHZ1 1483 aa16.32■□□□□ 0.2
NUP43-203ENST00000367404 MYO5CQ9NQX4 1742 aa16.32■□□□□ 0.2
NUP43-203ENST00000367404 CDK11AQ9UQ88 783 aaPredicted RBP16.31■□□□□ 0.2
NUP43-203ENST00000367404 MLECQ14165 292 aa16.3■□□□□ 0.2
NUP43-203ENST00000367404 UBTFP17480 764 aaKnown RBP16.29■□□□□ 0.2
NUP43-203ENST00000367404 REREQ9P2R6 1566 aa16.28■□□□□ 0.2
NUP43-203ENST00000367404 ARHGAP5Q13017 1502 aa16.28■□□□□ 0.2
NUP43-203ENST00000367404 CLIP1P30622 1438 aa16.28■□□□□ 0.2
NUP43-203ENST00000367404 DIP2CQ9Y2E4 1556 aa16.26■□□□□ 0.19
NUP43-203ENST00000367404 PREX1Q8TCU6 1659 aa16.25■□□□□ 0.19
NUP43-203ENST00000367404 MLH3Q9UHC1 1453 aa16.25■□□□□ 0.19
NUP43-203ENST00000367404 ATP1B4Q9UN42 357 aaPredicted RBP16.25■□□□□ 0.19
NUP43-203ENST00000367404 POTEHQ6S545 545 aa16.24■□□□□ 0.19
NUP43-203ENST00000367404 LRRIQ1Q96JM4 1722 aa16.23■□□□□ 0.19
NUP43-203ENST00000367404 AFAP1Q8N556 730 aa16.23■□□□□ 0.19
NUP43-203ENST00000367404 ABCC1P33527 1531 aa16.23■□□□□ 0.19
NUP43-203ENST00000367404 CERKQ8TCT0 537 aa16.22■□□□□ 0.19
NUP43-203ENST00000367404 AGLP35573 1532 aa16.22■□□□□ 0.19
NUP43-203ENST00000367404 ABCA6Q8N139 1617 aa16.22■□□□□ 0.19
NUP43-203ENST00000367404 CCDC18Q5T9S5 1454 aa16.22■□□□□ 0.19
NUP43-203ENST00000367404 CASKIN1Q8WXD9 1431 aa16.21■□□□□ 0.19
NUP43-203ENST00000367404 PREX2Q70Z35 1606 aa16.21■□□□□ 0.19
NUP43-203ENST00000367404 AKT1S1Q96B36 256 aa16.21■□□□□ 0.19
NUP43-203ENST00000367404 CEBPAP49715 358 aaPredicted RBP16.2■□□□□ 0.18
NUP43-203ENST00000367404 UHRF1BP1Q6BDS2 1440 aa16.19■□□□□ 0.18
NUP43-203ENST00000367404 TRAPPC8Q9Y2L5 1435 aa16.19■□□□□ 0.18
NUP43-203ENST00000367404 CDC42BPBQ9Y5S2 1711 aa16.19■□□□□ 0.18
NUP43-203ENST00000367404 MKRN4PQ13434 485 aaPredicted RBP16.19■□□□□ 0.18
NUP43-203ENST00000367404 ITSN2Q9NZM3 1697 aa16.16■□□□□ 0.18
NUP43-203ENST00000367404 STRCQ7RTU9 1775 aa16.15■□□□□ 0.18
NUP43-203ENST00000367404 FYCO1Q9BQS8 1478 aa16.15■□□□□ 0.18
NUP43-203ENST00000367404 C3P01024 1663 aa16.13■□□□□ 0.17
NUP43-203ENST00000367404 KIDINS220Q9ULH0 1771 aa16.13■□□□□ 0.17
NUP43-203ENST00000367404 PTPRTO14522 1441 aa16.12■□□□□ 0.17
NUP43-203ENST00000367404 CNTLNQ9NXG0 1405 aa16.12■□□□□ 0.17
NUP43-203ENST00000367404 MYT1LQ9UL68 1186 aa16.11■□□□□ 0.17
NUP43-203ENST00000367404 SAMD9LQ8IVG5 1584 aa16.11■□□□□ 0.17
NUP43-203ENST00000367404 CDC42BPAQ5VT25 1732 aa16.1■□□□□ 0.17
NUP43-203ENST00000367404 GPATCH8Q9UKJ3 1502 aaKnown RBP16.09■□□□□ 0.17
NUP43-203ENST00000367404 CHRDL2Q6WN34 429 aa16.08■□□□□ 0.16
NUP43-203ENST00000367404 NCOA1Q15788 1441 aa16.08■□□□□ 0.16
NUP43-203ENST00000367404 SYCP2Q9BX26 1530 aa16.08■□□□□ 0.16
NUP43-203ENST00000367404 REM2Q8IYK8 340 aaPredicted RBP16.07■□□□□ 0.16
NUP43-203ENST00000367404 NPATQ14207 1427 aa16.07■□□□□ 0.16
NUP43-203ENST00000367404 SETD1BQ9UPS6 1966 aaKnown RBP16.06■□□□□ 0.16
NUP43-203ENST00000367404 KIAA1107Q9UPP5 1409 aa16.06■□□□□ 0.16
NUP43-203ENST00000367404 MROH2AA6NES4 1674 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms