RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ADAMTSL3P82987 1691 aa31.74■■■□□ 2.67
SHISA4-201ENST00000362011 RAPGEF3O95398 923 aa31.73■■■□□ 2.67
SHISA4-201ENST00000362011 FRMPD1Q5SYB0 1578 aa31.71■■■□□ 2.67
SHISA4-201ENST00000362011 CDC42BPAQ5VT25 1732 aa31.71■■■□□ 2.67
SHISA4-201ENST00000362011 PTPRMP28827 1452 aa31.67■■■□□ 2.66
SHISA4-201ENST00000362011 MYO5CQ9NQX4 1742 aa31.67■■■□□ 2.66
SHISA4-201ENST00000362011 TTC37Q6PGP7 1564 aa31.65■■■□□ 2.66
SHISA4-201ENST00000362011 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.64■■■□□ 2.66
SHISA4-201ENST00000362011 MYOM3Q5VTT5 1437 aa31.63■■■□□ 2.65
SHISA4-201ENST00000362011 TRIM26Q12899 539 aaPredicted RBP31.61■■■□□ 2.65
SHISA4-201ENST00000362011 BCORL1Q5H9F3 1711 aa31.61■■■□□ 2.65
SHISA4-201ENST00000362011 PREX2Q70Z35 1606 aa31.6■■■□□ 2.65
SHISA4-201ENST00000362011 CCNB3Q8WWL7 1395 aa31.6■■■□□ 2.65
SHISA4-201ENST00000362011 CDC42BPBQ9Y5S2 1711 aa31.59■■■□□ 2.65
SHISA4-201ENST00000362011 RRBP1Q9P2E9 1410 aaKnown RBP31.58■■■□□ 2.65
SHISA4-201ENST00000362011 PTPN23Q9H3S7 1636 aa31.56■■■□□ 2.64
SHISA4-201ENST00000362011 FGD6Q6ZV73 1430 aa31.55■■■□□ 2.64
SHISA4-201ENST00000362011 DENND4BO75064 1496 aaPredicted RBP31.55■■■□□ 2.64
SHISA4-201ENST00000362011 ARHGEF40Q8TER5 1519 aa31.55■■■□□ 2.64
SHISA4-201ENST00000362011 AKNAQ7Z591 1439 aa31.54■■■□□ 2.64
SHISA4-201ENST00000362011 GPATCH8Q9UKJ3 1502 aaKnown RBP31.54■■■□□ 2.64
SHISA4-201ENST00000362011 RICTORQ6R327 1708 aa31.54■■■□□ 2.64
SHISA4-201ENST00000362011 MADDQ8WXG6 1647 aa31.51■■■□□ 2.64
SHISA4-201ENST00000362011 MIA2Q96PC5 1412 aa31.51■■■□□ 2.64
SHISA4-201ENST00000362011 FANCAO15360 1455 aa31.51■■■□□ 2.63
SHISA4-201ENST00000362011 CFAP74Q9C0B2 1584 aa31.49■■■□□ 2.63
SHISA4-201ENST00000362011 ZMYM4Q5VZL5 1548 aa31.46■■■□□ 2.63
SHISA4-201ENST00000362011 ARID4BQ4LE39 1312 aaPredicted RBP31.45■■■□□ 2.62
SHISA4-201ENST00000362011 TCOF1Q13428 1488 aaKnown RBP31.44■■■□□ 2.62
SHISA4-201ENST00000362011 LMTK3Q96Q04 1460 aa31.43■■■□□ 2.62
SHISA4-201ENST00000362011 ARHGAP5Q13017 1502 aa31.42■■■□□ 2.62
SHISA4-201ENST00000362011 FBXO41Q8TF61 875 aa31.41■■■□□ 2.62
SHISA4-201ENST00000362011 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.41■■■□□ 2.62
SHISA4-201ENST00000362011 PLCH2O75038 1416 aa31.4■■■□□ 2.62
SHISA4-201ENST00000362011 MAGI2Q86UL8 1455 aa31.39■■■□□ 2.62
SHISA4-201ENST00000362011 CFDP1Q9UEE9 299 aaPredicted RBP31.39■■■□□ 2.62
SHISA4-201ENST00000362011 CAMSAP2Q08AD1 1489 aa31.38■■■□□ 2.61
SHISA4-201ENST00000362011 SAMD9LQ8IVG5 1584 aa31.37■■■□□ 2.61
SHISA4-201ENST00000362011 FAM50AQ14320 339 aaKnown RBP31.36■■■□□ 2.61
SHISA4-201ENST00000362011 RIMS1Q86UR5 1692 aaKnown RBP31.36■■■□□ 2.61
SHISA4-201ENST00000362011 ZFYVE16Q7Z3T8 1539 aa31.35■■■□□ 2.61
SHISA4-201ENST00000362011 PCGF6Q9BYE7 350 aa31.35■■■□□ 2.61
SHISA4-201ENST00000362011 YEATS2Q9ULM3 1422 aa31.35■■■□□ 2.61
SHISA4-201ENST00000362011 SIGLEC1Q9BZZ2 1709 aa31.34■■■□□ 2.61
SHISA4-201ENST00000362011 POGZQ7Z3K3 1410 aa31.33■■■□□ 2.61
SHISA4-201ENST00000362011 DNMT1P26358 1616 aaKnown RBP31.31■■■□□ 2.6
SHISA4-201ENST00000362011 CROCC2H7BZ55 1655 aa31.3■■■□□ 2.6
SHISA4-201ENST00000362011 ZNF777Q9ULD5 760 aaPredicted RBP31.28■■■□□ 2.6
SHISA4-201ENST00000362011 SCAPERQ9BY12 1400 aa31.28■■■□□ 2.6
SHISA4-201ENST00000362011 PLEKHH2Q8IVE3 1493 aa31.25■■■□□ 2.59
SHISA4-201ENST00000362011 EFCAB2Q5VUJ9 269 aa31.24■■■□□ 2.59
SHISA4-201ENST00000362011 ZNF644Q9H582 1327 aaPredicted RBP31.24■■■□□ 2.59
SHISA4-201ENST00000362011 ABCC1P33527 1531 aa31.24■■■□□ 2.59
SHISA4-201ENST00000362011 ARHGEF5Q12774 1597 aa31.24■■■□□ 2.59
SHISA4-201ENST00000362011 SYCP2Q9BX26 1530 aa31.21■■■□□ 2.59
SHISA4-201ENST00000362011 ADGBQ8N7X0 1667 aa31.2■■■□□ 2.58
SHISA4-201ENST00000362011 ATP10AO60312 1499 aa31.18■■■□□ 2.58
SHISA4-201ENST00000362011 ITGAEP38570 1179 aa31.18■■■□□ 2.58
SHISA4-201ENST00000362011 DAPK1P53355 1430 aa31.17■■■□□ 2.58
SHISA4-201ENST00000362011 ARHGEF12Q9NZN5 1544 aa31.17■■■□□ 2.58
SHISA4-201ENST00000362011 KIAA1107Q9UPP5 1409 aa31.16■■■□□ 2.58
SHISA4-201ENST00000362011 HSPA2P54652 639 aa31.15■■■□□ 2.58
SHISA4-201ENST00000362011 C9orf84Q5VXU9 1444 aa31.14■■■□□ 2.58
SHISA4-201ENST00000362011 FER1L4A9Z1Z3 1794 aa31.14■■■□□ 2.58
SHISA4-201ENST00000362011 MBD5Q9P267 1494 aa31.13■■■□□ 2.57
SHISA4-201ENST00000362011 ABCC5O15440 1437 aa31.12■■■□□ 2.57
SHISA4-201ENST00000362011 CCDC141Q6ZP82 1450 aa31.11■■■□□ 2.57
SHISA4-201ENST00000362011 MLECQ14165 292 aa31.1■■■□□ 2.57
SHISA4-201ENST00000362011 KDM5CP41229 1560 aa31.1■■■□□ 2.57
SHISA4-201ENST00000362011 ZNF518AQ6AHZ1 1483 aa31.09■■■□□ 2.57
SHISA4-201ENST00000362011 PTPRKQ15262 1439 aa31.09■■■□□ 2.57
SHISA4-201ENST00000362011 HNRNPMP52272 730 aaKnown RBP eCLIP31.08■■■□□ 2.57
SHISA4-201ENST00000362011 SHANK2Q9UPX8 1470 aa31.08■■■□□ 2.57
SHISA4-201ENST00000362011 MAST1Q9Y2H9 1570 aa31.07■■■□□ 2.56
SHISA4-201ENST00000362011 GCC2Q8IWJ2 1684 aa31.06■■■□□ 2.56
SHISA4-201ENST00000362011 RSPH4AQ5TD94 716 aa31.05■■■□□ 2.56
SHISA4-201ENST00000362011 PLPPR3Q6T4P5 718 aa31.04■■■□□ 2.56
SHISA4-201ENST00000362011 AFAP1Q8N556 730 aa31.01■■■□□ 2.56
SHISA4-201ENST00000362011 REREQ9P2R6 1566 aa31■■■□□ 2.55
SHISA4-201ENST00000362011 TRAPPC8Q9Y2L5 1435 aa31■■■□□ 2.55
SHISA4-201ENST00000362011 ADGRL2O95490 1459 aa30.99■■■□□ 2.55
SHISA4-201ENST00000362011 PREX1Q8TCU6 1659 aa30.98■■■□□ 2.55
SHISA4-201ENST00000362011 DIP2CQ9Y2E4 1556 aa30.97■■■□□ 2.55
SHISA4-201ENST00000362011 MLH3Q9UHC1 1453 aa30.97■■■□□ 2.55
SHISA4-201ENST00000362011 TSPY4P0CV99 314 aa30.96■■■□□ 2.55
SHISA4-201ENST00000362011 TSPY10P0CW01 314 aa30.96■■■□□ 2.55
SHISA4-201ENST00000362011 CHIC2Q9UKJ5 165 aa30.96■■■□□ 2.55
SHISA4-201ENST00000362011 ROCK1Q13464 1354 aa30.95■■■□□ 2.55
SHISA4-201ENST00000362011 PLXNC1O60486 1568 aa30.94■■■□□ 2.54
SHISA4-201ENST00000362011 INO80Q9ULG1 1556 aaPredicted RBP30.94■■■□□ 2.54
SHISA4-201ENST00000362011 CEBPAP49715 358 aaPredicted RBP30.94■■■□□ 2.54
SHISA4-201ENST00000362011 CERKQ8TCT0 537 aa30.94■■■□□ 2.54
SHISA4-201ENST00000362011 HFM1A2PYH4 1435 aa30.92■■■□□ 2.54
SHISA4-201ENST00000362011 ANKRD30AQ9BXX3 1397 aa30.9■■■□□ 2.54
SHISA4-201ENST00000362011 ABCA6Q8N139 1617 aa30.89■■■□□ 2.54
SHISA4-201ENST00000362011 AGLP35573 1532 aa30.89■■■□□ 2.54
SHISA4-201ENST00000362011 ATP7AQ04656 1500 aa30.89■■■□□ 2.53
SHISA4-201ENST00000362011 SETD5Q9C0A6 1442 aa30.88■■■□□ 2.53
SHISA4-201ENST00000362011 KIDINS220Q9ULH0 1771 aa30.88■■■□□ 2.53
SHISA4-201ENST00000362011 NAIPQ13075 1403 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms