RNA–Protein interactions for RNA: ENST00000362003.9

PCGF3-201, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCGF3, Length 5,685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-201ENST00000362003 CCDC18Q5T9S5 1454 aa22.21■■□□□ 1.15
PCGF3-201ENST00000362003 ATAD2BQ9ULI0 1458 aa22.2■■□□□ 1.14
PCGF3-201ENST00000362003 MPHOSPH9Q99550 1183 aa22.2■■□□□ 1.14
PCGF3-201ENST00000362003 NUP155O75694 1391 aa22.2■■□□□ 1.14
PCGF3-201ENST00000362003 HDGFL2Q7Z4V5 671 aaPredicted RBP22.19■■□□□ 1.14
PCGF3-201ENST00000362003 OS9Q13438 667 aaPredicted RBP22.18■■□□□ 1.14
PCGF3-201ENST00000362003 EIF3AQ14152 1382 aaKnown RBP22.18■■□□□ 1.14
PCGF3-201ENST00000362003 FHOD3Q2V2M9 1422 aa22.18■■□□□ 1.14
PCGF3-201ENST00000362003 FOXD1Q16676 465 aa22.16■■□□□ 1.14
PCGF3-201ENST00000362003 SAFB2Q14151 953 aaKnown RBP eCLIP22.16■■□□□ 1.144e-6■■■□□ 19
PCGF3-201ENST00000362003 RGS3P49796 1198 aa22.15■■□□□ 1.14
PCGF3-201ENST00000362003 TRIM44Q96DX7 344 aaPredicted RBP22.15■■□□□ 1.14
PCGF3-201ENST00000362003 ZRSR1Q15695 479 aaKnown RBP22.15■■□□□ 1.14
PCGF3-201ENST00000362003 STK26Q9P289 416 aa22.13■■□□□ 1.13
PCGF3-201ENST00000362003 NPHP1O15259 732 aa22.12■■□□□ 1.13
PCGF3-201ENST00000362003 GLIPR1L2Q4G1C9 344 aa22.11■■□□□ 1.13
PCGF3-201ENST00000362003 RSPH4AQ5TD94 716 aa22.09■■□□□ 1.13
PCGF3-201ENST00000362003 RALBP1Q15311 655 aa22.09■■□□□ 1.13
PCGF3-201ENST00000362003 RTF1Q92541 710 aaKnown RBP22.09■■□□□ 1.13
PCGF3-201ENST00000362003 SOX12O15370 315 aa22.09■■□□□ 1.13
PCGF3-201ENST00000362003 FANCD2Q9BXW9 1451 aa22.08■■□□□ 1.13
PCGF3-201ENST00000362003 HSP90AB1P08238 724 aaKnown RBP22.05■■□□□ 1.12
PCGF3-201ENST00000362003 HNRNPMP52272 730 aaKnown RBP eCLIP22.05■■□□□ 1.127e-7■■■■■ 38.1
PCGF3-201ENST00000362003 CALD1Q05682 793 aaKnown RBP22.03■■□□□ 1.12
PCGF3-201ENST00000362003 SPAG9O60271 1321 aaKnown RBP22.03■■□□□ 1.12
PCGF3-201ENST00000362003 KIF3BO15066 747 aa22.02■■□□□ 1.12
PCGF3-201ENST00000362003 PTMAP06454 111 aaKnown RBP22.02■■□□□ 1.12
PCGF3-201ENST00000362003 B4GALNT3Q6L9W6 998 aa22.01■■□□□ 1.11
PCGF3-201ENST00000362003 KCNJ4P48050 445 aa22.01■■□□□ 1.11
PCGF3-201ENST00000362003 CFAP44Q96MT7 982 aa22■■□□□ 1.11
PCGF3-201ENST00000362003 GOLGA2Q08379 1002 aa22■■□□□ 1.11
PCGF3-201ENST00000362003 IPO8O15397 1037 aaKnown RBP21.99■■□□□ 1.11
PCGF3-201ENST00000362003 FGD1P98174 961 aa21.99■■□□□ 1.11
PCGF3-201ENST00000362003 NOP58Q9Y2X3 529 aaKnown RBP21.98■■□□□ 1.11
PCGF3-201ENST00000362003 TPRNQ4KMQ1 711 aa21.97■■□□□ 1.11
PCGF3-201ENST00000362003 MCCP23508 829 aa21.97■■□□□ 1.11
PCGF3-201ENST00000362003 JPH4Q96JJ6 628 aa21.97■■□□□ 1.11
PCGF3-201ENST00000362003 PAK3O75914 559 aaPredicted RBP21.96■■□□□ 1.11
PCGF3-201ENST00000362003 HSCBQ8IWL3 235 aa21.96■■□□□ 1.11
PCGF3-201ENST00000362003 U2AF1L5P0DN76 240 aaPredicted RBP21.94■■□□□ 1.1
PCGF3-201ENST00000362003 U2AF1Q01081 240 aaKnown RBP eCLIP21.94■■□□□ 1.13e-6■□□□□ 10.4
PCGF3-201ENST00000362003 WASHC2CQ9Y4E1 1318 aa21.93■■□□□ 1.1
PCGF3-201ENST00000362003 TERF2IPQ9NYB0 399 aa21.92■■□□□ 1.1
PCGF3-201ENST00000362003 EID1Q9Y6B2 187 aa21.91■■□□□ 1.1
PCGF3-201ENST00000362003 L3MBTL2Q969R5 705 aa21.9■■□□□ 1.1
PCGF3-201ENST00000362003 NAP1L2Q9ULW6 460 aaPredicted RBP21.9■■□□□ 1.1
PCGF3-201ENST00000362003 UACAQ9BZF9 1416 aa21.89■■□□□ 1.1
PCGF3-201ENST00000362003 RCAN3Q9UKA8 241 aa21.89■■□□□ 1.09
PCGF3-201ENST00000362003 ERICH6BQ5W0A0 696 aa21.89■■□□□ 1.09
PCGF3-201ENST00000362003 GOLGA6L6A8MZA4 724 aa21.88■■□□□ 1.09
PCGF3-201ENST00000362003 CSB-PGBD3P0DP91 1061 aa21.88■■□□□ 1.09
PCGF3-201ENST00000362003 CCDC144AA2RUR9 1427 aa21.86■■□□□ 1.09
PCGF3-201ENST00000362003 CHMP4AQ9BY43 222 aa21.85■■□□□ 1.09
PCGF3-201ENST00000362003 TAOK2Q9UL54 1235 aa21.85■■□□□ 1.09
PCGF3-201ENST00000362003 PTPRGP23470 1445 aa21.85■■□□□ 1.09
PCGF3-201ENST00000362003 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
PCGF3-201ENST00000362003 FGD5Q6ZNL6 1462 aa21.84■■□□□ 1.09
PCGF3-201ENST00000362003 ITPRIPQ8IWB1 547 aa21.84■■□□□ 1.09
PCGF3-201ENST00000362003 RWDD1Q9H446 243 aaPredicted RBP21.84■■□□□ 1.09
PCGF3-201ENST00000362003 PHLDB1Q86UU1 1377 aa21.83■■□□□ 1.09
PCGF3-201ENST00000362003 DNTTIP2Q5QJE6 756 aaKnown RBP21.83■■□□□ 1.09
PCGF3-201ENST00000362003 GAPVD1Q14C86 1478 aa21.82■■□□□ 1.08
PCGF3-201ENST00000362003 KIF15Q9NS87 1388 aa21.81■■□□□ 1.08
PCGF3-201ENST00000362003 NUTM2DQ5VT03 806 aaPredicted RBP21.8■■□□□ 1.08
PCGF3-201ENST00000362003 GOLGA6L4A6NEF3 574 aa21.79■■□□□ 1.08
PCGF3-201ENST00000362003 CUX1P39880 1505 aa21.78■■□□□ 1.08
PCGF3-201ENST00000362003 PMFBP1Q8TBY8 1022 aa21.78■■□□□ 1.08
PCGF3-201ENST00000362003 STK31Q9BXU1 1019 aa21.78■■□□□ 1.08
PCGF3-201ENST00000362003 NLRP13Q86W25 1043 aa21.77■■□□□ 1.08
PCGF3-201ENST00000362003 PLCB2Q00722 1185 aa21.77■■□□□ 1.08
PCGF3-201ENST00000362003 LMOD3Q0VAK6 560 aa21.77■■□□□ 1.08
PCGF3-201ENST00000362003 TULP1O00294 542 aaPredicted RBP21.77■■□□□ 1.08
PCGF3-201ENST00000362003 KIAA1211Q6ZU35 1233 aa21.76■■□□□ 1.07
PCGF3-201ENST00000362003 NGDNQ8NEJ9 315 aaKnown RBP21.75■■□□□ 1.07
PCGF3-201ENST00000362003 DHX57Q6P158 1386 aaKnown RBP21.75■■□□□ 1.07
PCGF3-201ENST00000362003 APBB1O00213 710 aa21.75■■□□□ 1.07
PCGF3-201ENST00000362003 SMC4Q9NTJ3 1288 aa21.73■■□□□ 1.07
PCGF3-201ENST00000362003 PDE3BQ13370 1112 aa21.73■■□□□ 1.07
PCGF3-201ENST00000362003 MYBBP1AQ9BQG0 1328 aaKnown RBP21.72■■□□□ 1.07
PCGF3-201ENST00000362003 NRDCO43847 1150 aa21.72■■□□□ 1.07
PCGF3-201ENST00000362003 CCDC146Q8IYE0 955 aa21.71■■□□□ 1.07
PCGF3-201ENST00000362003 PRDM2Q13029 1718 aa21.71■■□□□ 1.07
PCGF3-201ENST00000362003 TRAK1Q9UPV9 953 aa21.71■■□□□ 1.07
PCGF3-201ENST00000362003 HDAC5Q9UQL6 1122 aa21.71■■□□□ 1.07
PCGF3-201ENST00000362003 TCERG1O14776 1098 aaKnown RBP21.71■■□□□ 1.07
PCGF3-201ENST00000362003 RAD54L2Q9Y4B4 1467 aa21.7■■□□□ 1.06
PCGF3-201ENST00000362003 AMPHP49418 695 aa21.7■■□□□ 1.06
PCGF3-201ENST00000362003 PTMSP20962 102 aa21.69■■□□□ 1.06
PCGF3-201ENST00000362003 GPATCH3Q96I76 525 aa21.69■■□□□ 1.06
PCGF3-201ENST00000362003 CENPJQ9HC77 1338 aaPredicted RBP21.69■■□□□ 1.06
PCGF3-201ENST00000362003 SPRYD3Q8NCJ5 442 aa21.69■■□□□ 1.06
PCGF3-201ENST00000362003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.68■■□□□ 1.063e-6■■□□□ 12.5
PCGF3-201ENST00000362003 ZNF330Q9Y3S2 320 aaPredicted RBP21.68■■□□□ 1.06
PCGF3-201ENST00000362003 HMMRO75330 724 aa21.67■■□□□ 1.06
PCGF3-201ENST00000362003 MYOM3Q5VTT5 1437 aa21.67■■□□□ 1.06
PCGF3-201ENST00000362003 L1TD1Q5T7N2 865 aaKnown RBP21.67■■□□□ 1.06
PCGF3-201ENST00000362003 VGFO15240 615 aaPredicted RBP21.67■■□□□ 1.06
PCGF3-201ENST00000362003 IGF1RP08069 1367 aa21.67■■□□□ 1.06
PCGF3-201ENST00000362003 GNL2Q13823 731 aaKnown RBP21.66■■□□□ 1.06
PCGF3-201ENST00000362003 EVC2Q86UK5 1308 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms