RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 NUP153P49790 1475 aaKnown RBP21.71■■□□□ 1.07
CNKSR1-201ENST00000361530 ABCC5O15440 1437 aa21.71■■□□□ 1.07
CNKSR1-201ENST00000361530 KIAA0556O60303 1618 aa21.7■■□□□ 1.06
CNKSR1-201ENST00000361530 NEFLP07196 543 aa21.69■■□□□ 1.06
CNKSR1-201ENST00000361530 ANP32EQ9BTT0 268 aa21.69■■□□□ 1.06
CNKSR1-201ENST00000361530 ROCK1Q13464 1354 aa21.68■■□□□ 1.06
CNKSR1-201ENST00000361530 C11orf95C9JLR9 678 aaPredicted RBP21.68■■□□□ 1.06
CNKSR1-201ENST00000361530 ANKRD30BQ9BXX2 1392 aa21.68■■□□□ 1.06
CNKSR1-201ENST00000361530 NBPF8Q3BBV2 869 aa21.65■■□□□ 1.06
CNKSR1-201ENST00000361530 DNMT1P26358 1616 aaKnown RBP21.65■■□□□ 1.06
CNKSR1-201ENST00000361530 HNRNPUQ00839 825 aaKnown RBP eCLIP21.64■■□□□ 1.06
CNKSR1-201ENST00000361530 GRIN2AQ12879 1464 aa21.64■■□□□ 1.05
CNKSR1-201ENST00000361530 RAPGEF6Q8TEU7 1601 aa21.63■■□□□ 1.05
CNKSR1-201ENST00000361530 RPRD2Q5VT52 1461 aaKnown RBP21.63■■□□□ 1.05
CNKSR1-201ENST00000361530 SLC4A1APQ9BWU0 796 aaKnown RBP21.62■■□□□ 1.05
CNKSR1-201ENST00000361530 CDK11AQ9UQ88 783 aaPredicted RBP21.61■■□□□ 1.05
CNKSR1-201ENST00000361530 PRG4Q92954 1404 aaPredicted RBP21.61■■□□□ 1.05
CNKSR1-201ENST00000361530 CCDC184Q52MB2 194 aa21.61■■□□□ 1.05
CNKSR1-201ENST00000361530 CNTLNQ9NXG0 1405 aa21.59■■□□□ 1.05
CNKSR1-201ENST00000361530 NCOA1Q15788 1441 aa21.59■■□□□ 1.05
CNKSR1-201ENST00000361530 TEX14Q8IWB6 1497 aa21.58■■□□□ 1.05
CNKSR1-201ENST00000361530 CCDC7Q96M83 1385 aa21.58■■□□□ 1.05
CNKSR1-201ENST00000361530 EIF4G3O43432 1585 aaKnown RBP21.58■■□□□ 1.05
CNKSR1-201ENST00000361530 CFDP1Q9UEE9 299 aaPredicted RBP21.56■■□□□ 1.04
CNKSR1-201ENST00000361530 TROQ12816 1431 aaPredicted RBP21.55■■□□□ 1.04
CNKSR1-201ENST00000361530 PLB1Q6P1J6 1458 aa21.55■■□□□ 1.04
CNKSR1-201ENST00000361530 PRKRIP1Q9H875 184 aaPredicted RBP21.53■■□□□ 1.04
CNKSR1-201ENST00000361530 CHMP7Q8WUX9 453 aaPredicted RBP21.53■■□□□ 1.04
CNKSR1-201ENST00000361530 PZPP20742 1482 aa21.53■■□□□ 1.04
CNKSR1-201ENST00000361530 CAMSAP2Q08AD1 1489 aa21.53■■□□□ 1.04
CNKSR1-201ENST00000361530 ZNF777Q9ULD5 760 aaPredicted RBP21.52■■□□□ 1.04
CNKSR1-201ENST00000361530 SPATA31E1Q6ZUB1 1445 aa21.52■■□□□ 1.03
CNKSR1-201ENST00000361530 GPATCH8Q9UKJ3 1502 aaKnown RBP21.51■■□□□ 1.03
CNKSR1-201ENST00000361530 FBLN2P98095 1184 aa21.5■■□□□ 1.03
CNKSR1-201ENST00000361530 CEP170Q5SW79 1584 aa21.5■■□□□ 1.03
CNKSR1-201ENST00000361530 KIF7Q2M1P5 1343 aa21.5■■□□□ 1.03
CNKSR1-201ENST00000361530 IRX6P78412 446 aaPredicted RBP21.48■■□□□ 1.03
CNKSR1-201ENST00000361530 KIF14Q15058 1648 aa21.48■■□□□ 1.03
CNKSR1-201ENST00000361530 MAGI1Q96QZ7 1491 aaPredicted RBP21.47■■□□□ 1.03
CNKSR1-201ENST00000361530 FAM9BQ8IZU0 186 aa21.45■■□□□ 1.02
CNKSR1-201ENST00000361530 SYNJ2O15056 1496 aa21.45■■□□□ 1.02
CNKSR1-201ENST00000361530 JPH4Q96JJ6 628 aa21.45■■□□□ 1.02
CNKSR1-201ENST00000361530 RBM19Q9Y4C8 960 aaKnown RBP21.44■■□□□ 1.02
CNKSR1-201ENST00000361530 MRS2Q9HD23 443 aa21.44■■□□□ 1.02
CNKSR1-201ENST00000361530 ITSN2Q9NZM3 1697 aa21.43■■□□□ 1.02
CNKSR1-201ENST00000361530 ERCC6Q03468 1493 aa21.43■■□□□ 1.02
CNKSR1-201ENST00000361530 PKD2Q13563 968 aa21.42■■□□□ 1.02
CNKSR1-201ENST00000361530 ADGRL2O95490 1459 aa21.42■■□□□ 1.02
CNKSR1-201ENST00000361530 KIAA1107Q9UPP5 1409 aa21.42■■□□□ 1.02
CNKSR1-201ENST00000361530 ERICH6Q7L0X2 663 aa21.41■■□□□ 1.02
CNKSR1-201ENST00000361530 ADGBQ8N7X0 1667 aa21.4■■□□□ 1.02
CNKSR1-201ENST00000361530 ADCY10Q96PN6 1610 aa21.4■■□□□ 1.02
CNKSR1-201ENST00000361530 CARMIL2Q6F5E8 1435 aa21.39■■□□□ 1.02
CNKSR1-201ENST00000361530 ZNF326Q5BKZ1 582 aaKnown RBP21.39■■□□□ 1.01
CNKSR1-201ENST00000361530 ANKRD30AQ9BXX3 1397 aa21.39■■□□□ 1.01
CNKSR1-201ENST00000361530 MBD5Q9P267 1494 aa21.39■■□□□ 1.01
CNKSR1-201ENST00000361530 NUP160Q12769 1436 aa21.37■■□□□ 1.01
CNKSR1-201ENST00000361530 CROCC2H7BZ55 1655 aa21.37■■□□□ 1.01
CNKSR1-201ENST00000361530 ANKRD50Q9ULJ7 1429 aa21.36■■□□□ 1.01
CNKSR1-201ENST00000361530 PLEKHD1A6NEE1 506 aa21.36■■□□□ 1.01
CNKSR1-201ENST00000361530 POLR1AO95602 1720 aaPredicted RBP21.35■■□□□ 1.01
CNKSR1-201ENST00000361530 USP47Q96K76 1375 aa21.34■■□□□ 1.01
CNKSR1-201ENST00000361530 CNGB1Q14028 1251 aaPredicted RBP21.32■■□□□ 1
CNKSR1-201ENST00000361530 ZBED9Q6R2W3 1325 aa21.32■■□□□ 1
CNKSR1-201ENST00000361530 ATP10BO94823 1461 aa21.32■■□□□ 1
CNKSR1-201ENST00000361530 POLR3GLQ9BT43 218 aa21.32■■□□□ 1
CNKSR1-201ENST00000361530 BCORL1Q5H9F3 1711 aa21.32■■□□□ 1
CNKSR1-201ENST00000361530 DHX29Q7Z478 1369 aaKnown RBP21.32■■□□□ 1
CNKSR1-201ENST00000361530 ABCC10Q5T3U5 1492 aa21.31■■□□□ 1
CNKSR1-201ENST00000361530 NUP155O75694 1391 aa21.31■■□□□ 1
CNKSR1-201ENST00000361530 CDC42BPAQ5VT25 1732 aa21.3■■□□□ 1
CNKSR1-201ENST00000361530 ABCA8O94911 1581 aa21.3■■□□□ 1
CNKSR1-201ENST00000361530 C9orf84Q5VXU9 1444 aa21.29■■□□□ 1
CNKSR1-201ENST00000361530 HNRNPMP52272 730 aaKnown RBP eCLIP21.26■□□□□ 0.99
CNKSR1-201ENST00000361530 TSPY4P0CV99 314 aa21.25■□□□□ 0.99
CNKSR1-201ENST00000361530 TSPY10P0CW01 314 aa21.25■□□□□ 0.99
CNKSR1-201ENST00000361530 ERICH6BQ5W0A0 696 aa21.25■□□□□ 0.99
CNKSR1-201ENST00000361530 KDM5CP41229 1560 aa21.25■□□□□ 0.99
CNKSR1-201ENST00000361530 SHANK2Q9UPX8 1470 aa21.24■□□□□ 0.99
CNKSR1-201ENST00000361530 PPP4R2Q9NY27 417 aa21.24■□□□□ 0.99
CNKSR1-201ENST00000361530 UHRF1BP1Q6BDS2 1440 aa21.23■□□□□ 0.99
CNKSR1-201ENST00000361530 KDM2AQ9Y2K7 1162 aa21.22■□□□□ 0.99
CNKSR1-201ENST00000361530 CARD11Q9BXL7 1154 aa21.21■□□□□ 0.99
CNKSR1-201ENST00000361530 KIF15Q9NS87 1388 aa21.2■□□□□ 0.99
CNKSR1-201ENST00000361530 RALGAPBQ86X10 1494 aa21.2■□□□□ 0.98
CNKSR1-201ENST00000361530 ARID4BQ4LE39 1312 aaPredicted RBP21.19■□□□□ 0.98
CNKSR1-201ENST00000361530 KDM5DQ9BY66 1539 aa21.17■□□□□ 0.98
CNKSR1-201ENST00000361530 B4GALNT3Q6L9W6 998 aa21.17■□□□□ 0.98
CNKSR1-201ENST00000361530 DCAF11Q8TEB1 546 aa21.17■□□□□ 0.98
CNKSR1-201ENST00000361530 PTPRGP23470 1445 aa21.16■□□□□ 0.98
CNKSR1-201ENST00000361530 ST20-MTHFSA0A0A6YYL1 179 aa21.16■□□□□ 0.98
CNKSR1-201ENST00000361530 MSH5O43196 834 aa21.16■□□□□ 0.98
CNKSR1-201ENST00000361530 ARHGEF12Q9NZN5 1544 aa21.15■□□□□ 0.98
CNKSR1-201ENST00000361530 SENP3-EIF4A1A0A087X0R7 540 aa21.15■□□□□ 0.98
CNKSR1-201ENST00000361530 ARHGEF5Q12774 1597 aa21.13■□□□□ 0.97
CNKSR1-201ENST00000361530 PNISRQ8TF01 805 aaKnown RBP21.12■□□□□ 0.97
CNKSR1-201ENST00000361530 SMG6Q86US8 1419 aaKnown RBP21.12■□□□□ 0.97
CNKSR1-201ENST00000361530 ROCK2O75116 1388 aaKnown RBP21.11■□□□□ 0.97
CNKSR1-201ENST00000361530 SAMD9LQ8IVG5 1584 aa21.1■□□□□ 0.97
CNKSR1-201ENST00000361530 CCDC141Q6ZP82 1450 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms