RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.98■□□□□ 0.47
UBA3-202ENST00000361055 CDC42BPAQ5VT25 1732 aa17.97■□□□□ 0.47
UBA3-202ENST00000361055 FGD6Q6ZV73 1430 aa17.97■□□□□ 0.47
UBA3-202ENST00000361055 TTC37Q6PGP7 1564 aa17.96■□□□□ 0.47
UBA3-202ENST00000361055 MIA2Q96PC5 1412 aa17.95■□□□□ 0.46
UBA3-202ENST00000361055 GPATCH8Q9UKJ3 1502 aaKnown RBP17.95■□□□□ 0.46
UBA3-202ENST00000361055 MYO5CQ9NQX4 1742 aa17.94■□□□□ 0.46
UBA3-202ENST00000361055 ABCA9Q8IUA7 1624 aa17.93■□□□□ 0.46
UBA3-202ENST00000361055 PREX2Q70Z35 1606 aa17.92■□□□□ 0.46
UBA3-202ENST00000361055 PTPN23Q9H3S7 1636 aa17.92■□□□□ 0.46
UBA3-202ENST00000361055 CDC42BPBQ9Y5S2 1711 aa17.92■□□□□ 0.46
UBA3-202ENST00000361055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.91■□□□□ 0.46
UBA3-202ENST00000361055 CFDP1Q9UEE9 299 aaPredicted RBP17.9■□□□□ 0.46
UBA3-202ENST00000361055 TCOF1Q13428 1488 aaKnown RBP17.89■□□□□ 0.45
UBA3-202ENST00000361055 FAM50AQ14320 339 aaKnown RBP17.88■□□□□ 0.45
UBA3-202ENST00000361055 PLCH2O75038 1416 aa17.87■□□□□ 0.45
UBA3-202ENST00000361055 ARAP3Q8WWN8 1544 aa17.86■□□□□ 0.45
UBA3-202ENST00000361055 GLI2P10070 1586 aa17.86■□□□□ 0.45
UBA3-202ENST00000361055 RAB3GAP2Q9H2M9 1393 aa17.86■□□□□ 0.45
UBA3-202ENST00000361055 ARHGAP5Q13017 1502 aa17.85■□□□□ 0.45
UBA3-202ENST00000361055 DIP2BQ9P265 1576 aa17.85■□□□□ 0.45
UBA3-202ENST00000361055 ITGAEP38570 1179 aa17.84■□□□□ 0.45
UBA3-202ENST00000361055 SETD5Q9C0A6 1442 aa17.84■□□□□ 0.45
UBA3-202ENST00000361055 CAMSAP2Q08AD1 1489 aa17.84■□□□□ 0.45
UBA3-202ENST00000361055 ZNF777Q9ULD5 760 aaPredicted RBP17.82■□□□□ 0.44
UBA3-202ENST00000361055 MAP3K4Q9Y6R4 1608 aa17.82■□□□□ 0.44
UBA3-202ENST00000361055 ZNF644Q9H582 1327 aaPredicted RBP17.81■□□□□ 0.44
UBA3-202ENST00000361055 CD109Q6YHK3 1445 aa17.81■□□□□ 0.44
UBA3-202ENST00000361055 SAMD9LQ8IVG5 1584 aa17.81■□□□□ 0.44
UBA3-202ENST00000361055 EFCAB2Q5VUJ9 269 aa17.8■□□□□ 0.44
UBA3-202ENST00000361055 KIF13AQ9H1H9 1805 aa17.79■□□□□ 0.44
UBA3-202ENST00000361055 FAM69CQ0P6D2 419 aa17.79■□□□□ 0.44
UBA3-202ENST00000361055 DNMT1P26358 1616 aaKnown RBP17.78■□□□□ 0.44
UBA3-202ENST00000361055 TIMELESSQ9UNS1 1208 aa17.78■□□□□ 0.44
UBA3-202ENST00000361055 FANCAO15360 1455 aa17.78■□□□□ 0.44
UBA3-202ENST00000361055 PLEKHH2Q8IVE3 1493 aa17.77■□□□□ 0.44
UBA3-202ENST00000361055 MYT1Q01538 1121 aa17.77■□□□□ 0.43
UBA3-202ENST00000361055 CFAP74Q9C0B2 1584 aa17.76■□□□□ 0.43
UBA3-202ENST00000361055 DAPK1P53355 1430 aa17.74■□□□□ 0.43
UBA3-202ENST00000361055 KIAA1107Q9UPP5 1409 aa17.74■□□□□ 0.43
UBA3-202ENST00000361055 ARHGEF5Q12774 1597 aa17.74■□□□□ 0.43
UBA3-202ENST00000361055 ABCC1P33527 1531 aa17.74■□□□□ 0.43
UBA3-202ENST00000361055 SYCP2Q9BX26 1530 aa17.73■□□□□ 0.43
UBA3-202ENST00000361055 CROCC2H7BZ55 1655 aa17.73■□□□□ 0.43
UBA3-202ENST00000361055 MBD5Q9P267 1494 aa17.73■□□□□ 0.43
UBA3-202ENST00000361055 ABCC5O15440 1437 aa17.72■□□□□ 0.43
UBA3-202ENST00000361055 TSPOAP1O95153 1857 aa17.72■□□□□ 0.43
UBA3-202ENST00000361055 PTPRKQ15262 1439 aa17.72■□□□□ 0.43
UBA3-202ENST00000361055 RSPH4AQ5TD94 716 aa17.72■□□□□ 0.43
UBA3-202ENST00000361055 HNRNPMP52272 730 aaKnown RBP eCLIP17.71■□□□□ 0.432e-8■■□□□ 13
UBA3-202ENST00000361055 AKNAQ7Z591 1439 aa17.7■□□□□ 0.42
UBA3-202ENST00000361055 NEO1Q92859 1461 aa17.7■□□□□ 0.42
UBA3-202ENST00000361055 CCDC141Q6ZP82 1450 aa17.69■□□□□ 0.42
UBA3-202ENST00000361055 ARHGEF12Q9NZN5 1544 aa17.69■□□□□ 0.42
UBA3-202ENST00000361055 PPRC1Q5VV67 1664 aaKnown RBP17.69■□□□□ 0.42
UBA3-202ENST00000361055 ADGRL1O94910 1474 aa17.69■□□□□ 0.42
UBA3-202ENST00000361055 SHANK2Q9UPX8 1470 aa17.67■□□□□ 0.42
UBA3-202ENST00000361055 TEX14Q8IWB6 1497 aa17.67■□□□□ 0.42
UBA3-202ENST00000361055 ADGBQ8N7X0 1667 aa17.67■□□□□ 0.42
UBA3-202ENST00000361055 TSPY4P0CV99 314 aa17.66■□□□□ 0.42
UBA3-202ENST00000361055 TSPY10P0CW01 314 aa17.66■□□□□ 0.42
UBA3-202ENST00000361055 SCAPERQ9BY12 1400 aa17.65■□□□□ 0.42
UBA3-202ENST00000361055 CHIC2Q9UKJ5 165 aa17.65■□□□□ 0.42
UBA3-202ENST00000361055 SUPT16HQ9Y5B9 1047 aaKnown RBP17.65■□□□□ 0.42
UBA3-202ENST00000361055 SIN3AQ96ST3 1273 aa17.64■□□□□ 0.42
UBA3-202ENST00000361055 ROCK1Q13464 1354 aa17.64■□□□□ 0.42
UBA3-202ENST00000361055 MAST1Q9Y2H9 1570 aa17.63■□□□□ 0.41
UBA3-202ENST00000361055 C9orf84Q5VXU9 1444 aa17.63■□□□□ 0.41
UBA3-202ENST00000361055 TRAPPC8Q9Y2L5 1435 aa17.63■□□□□ 0.41
UBA3-202ENST00000361055 ADGRL2O95490 1459 aa17.63■□□□□ 0.41
UBA3-202ENST00000361055 HFM1A2PYH4 1435 aa17.62■□□□□ 0.41
UBA3-202ENST00000361055 PPP1R15AO75807 674 aaPredicted RBP17.62■□□□□ 0.41
UBA3-202ENST00000361055 GCC2Q8IWJ2 1684 aa17.61■□□□□ 0.41
UBA3-202ENST00000361055 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
UBA3-202ENST00000361055 ZNF518AQ6AHZ1 1483 aa17.6■□□□□ 0.41
UBA3-202ENST00000361055 NCOA1Q15788 1441 aa17.6■□□□□ 0.41
UBA3-202ENST00000361055 ANKRD30AQ9BXX3 1397 aa17.6■□□□□ 0.41
UBA3-202ENST00000361055 NAIPQ13075 1403 aa17.59■□□□□ 0.41
UBA3-202ENST00000361055 POGZQ7Z3K3 1410 aa17.59■□□□□ 0.41
UBA3-202ENST00000361055 AFAP1Q8N556 730 aa17.59■□□□□ 0.41
UBA3-202ENST00000361055 RRP7BPQ9NSQ0 103 aa17.59■□□□□ 0.41
UBA3-202ENST00000361055 DENND4BO75064 1496 aaPredicted RBP17.58■□□□□ 0.41
UBA3-202ENST00000361055 RTEL1-TNFRSF6BF6WH68 1400 aa17.57■□□□□ 0.4
UBA3-202ENST00000361055 RICTORQ6R327 1708 aa17.57■□□□□ 0.4
UBA3-202ENST00000361055 KDM5CP41229 1560 aa17.57■□□□□ 0.4
UBA3-202ENST00000361055 PLXNC1O60486 1568 aa17.56■□□□□ 0.4
UBA3-202ENST00000361055 SPAG9O60271 1321 aaKnown RBP17.56■□□□□ 0.4
UBA3-202ENST00000361055 DDX10Q13206 875 aaKnown RBP17.56■□□□□ 0.4
UBA3-202ENST00000361055 INO80Q9ULG1 1556 aaPredicted RBP17.55■□□□□ 0.4
UBA3-202ENST00000361055 ZFYVE16Q7Z3T8 1539 aa17.55■□□□□ 0.4
UBA3-202ENST00000361055 ATP7AQ04656 1500 aa17.54■□□□□ 0.4
UBA3-202ENST00000361055 KIDINS220Q9ULH0 1771 aa17.52■□□□□ 0.4
UBA3-202ENST00000361055 HECW2Q9P2P5 1572 aa17.52■□□□□ 0.4
UBA3-202ENST00000361055 KIF15Q9NS87 1388 aa17.52■□□□□ 0.4
UBA3-202ENST00000361055 RAPGEF3O95398 923 aa17.52■□□□□ 0.39
UBA3-202ENST00000361055 MLH3Q9UHC1 1453 aa17.51■□□□□ 0.39
UBA3-202ENST00000361055 FRMPD1Q5SYB0 1578 aa17.51■□□□□ 0.39
UBA3-202ENST00000361055 CCER2I3L3R5 266 aa17.5■□□□□ 0.39
UBA3-202ENST00000361055 KDM6BO15054 1643 aa17.5■□□□□ 0.39
UBA3-202ENST00000361055 DUOX2Q9NRD8 1548 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms