RNA–Protein interactions for RNA: ENST00000360426.8

STAU1-203, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene STAU1, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-203ENST00000360426 HFM1A2PYH4 1435 aa16.76■□□□□ 0.27
STAU1-203ENST00000360426 C11orf95C9JLR9 678 aaPredicted RBP16.76■□□□□ 0.27
STAU1-203ENST00000360426 NBPF8Q3BBV2 869 aa16.76■□□□□ 0.27
STAU1-203ENST00000360426 PKD2Q13563 968 aa16.75■□□□□ 0.27
STAU1-203ENST00000360426 SUPT6HQ7KZ85 1726 aaKnown RBP16.74■□□□□ 0.27
STAU1-203ENST00000360426 UGGT2Q9NYU1 1516 aa16.74■□□□□ 0.27
STAU1-203ENST00000360426 EHBP1L1Q8N3D4 1523 aa16.74■□□□□ 0.27
STAU1-203ENST00000360426 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
STAU1-203ENST00000360426 UACAQ9BZF9 1416 aa16.72■□□□□ 0.27
STAU1-203ENST00000360426 ARHGEF11O15085 1522 aa16.72■□□□□ 0.27
STAU1-203ENST00000360426 KIAA0556O60303 1618 aa16.72■□□□□ 0.27
STAU1-203ENST00000360426 IRX6P78412 446 aaPredicted RBP16.72■□□□□ 0.27
STAU1-203ENST00000360426 CCDC184Q52MB2 194 aa16.71■□□□□ 0.27
STAU1-203ENST00000360426 HECW1Q76N89 1606 aa16.71■□□□□ 0.27
STAU1-203ENST00000360426 ABCC5O15440 1437 aa16.71■□□□□ 0.27
STAU1-203ENST00000360426 PTPRGP23470 1445 aa16.7■□□□□ 0.26
STAU1-203ENST00000360426 KIF14Q15058 1648 aa16.68■□□□□ 0.26
STAU1-203ENST00000360426 CARMIL2Q6F5E8 1435 aa16.68■□□□□ 0.26
STAU1-203ENST00000360426 ANP32CO43423 234 aa16.68■□□□□ 0.26
STAU1-203ENST00000360426 DAPK1P53355 1430 aa16.68■□□□□ 0.26
STAU1-203ENST00000360426 DENND4BO75064 1496 aaPredicted RBP16.67■□□□□ 0.26
STAU1-203ENST00000360426 TSPY4P0CV99 314 aa16.67■□□□□ 0.26
STAU1-203ENST00000360426 TSPY10P0CW01 314 aa16.67■□□□□ 0.26
STAU1-203ENST00000360426 ERCC6L2Q5T890 1561 aa16.67■□□□□ 0.26
STAU1-203ENST00000360426 FAM9BQ8IZU0 186 aa16.65■□□□□ 0.26
STAU1-203ENST00000360426 WASHC2AQ641Q2 1341 aa16.64■□□□□ 0.25
STAU1-203ENST00000360426 NUP155O75694 1391 aa16.64■□□□□ 0.25
STAU1-203ENST00000360426 ATP10BO94823 1461 aa16.63■□□□□ 0.25
STAU1-203ENST00000360426 MAGI1Q96QZ7 1491 aaPredicted RBP16.63■□□□□ 0.25
STAU1-203ENST00000360426 TROQ12816 1431 aaPredicted RBP16.62■□□□□ 0.25
STAU1-203ENST00000360426 RAPGEF6Q8TEU7 1601 aa16.62■□□□□ 0.25
STAU1-203ENST00000360426 GPATCH8Q9UKJ3 1502 aaKnown RBP16.61■□□□□ 0.25
STAU1-203ENST00000360426 EIF4G2P78344 907 aaKnown RBP eCLIP16.6■□□□□ 0.254e-8■■■□□ 18
STAU1-203ENST00000360426 DCAF11Q8TEB1 546 aa16.6■□□□□ 0.25
STAU1-203ENST00000360426 CAMSAP2Q08AD1 1489 aa16.6■□□□□ 0.25
STAU1-203ENST00000360426 AFAP1Q8N556 730 aa16.59■□□□□ 0.25
STAU1-203ENST00000360426 HNRNPUQ00839 825 aaKnown RBP eCLIP16.59■□□□□ 0.25
STAU1-203ENST00000360426 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.57■□□□□ 0.245e-7■■■■■ 29.7
STAU1-203ENST00000360426 SALL2Q9Y467 1007 aaPredicted RBP16.57■□□□□ 0.24
STAU1-203ENST00000360426 FKBP8Q14318 412 aa16.57■□□□□ 0.24
STAU1-203ENST00000360426 NUP160Q12769 1436 aa16.56■□□□□ 0.24
STAU1-203ENST00000360426 SUPT16HQ9Y5B9 1047 aaKnown RBP16.54■□□□□ 0.24
STAU1-203ENST00000360426 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
STAU1-203ENST00000360426 MIA2Q96PC5 1412 aa16.53■□□□□ 0.24
STAU1-203ENST00000360426 ANKRD50Q9ULJ7 1429 aa16.52■□□□□ 0.23
STAU1-203ENST00000360426 ANKRD30BQ9BXX2 1392 aa16.52■□□□□ 0.23
STAU1-203ENST00000360426 KIF15Q9NS87 1388 aa16.5■□□□□ 0.23
STAU1-203ENST00000360426 TCOF1Q13428 1488 aaKnown RBP16.5■□□□□ 0.23
STAU1-203ENST00000360426 NBPF1Q3BBV0 1214 aa16.49■□□□□ 0.23
STAU1-203ENST00000360426 ANKRD30AQ9BXX3 1397 aa16.49■□□□□ 0.23
STAU1-203ENST00000360426 CARD11Q9BXL7 1154 aa16.49■□□□□ 0.23
STAU1-203ENST00000360426 C9orf84Q5VXU9 1444 aa16.48■□□□□ 0.23
STAU1-203ENST00000360426 AKNAQ7Z591 1439 aa16.47■□□□□ 0.23
STAU1-203ENST00000360426 MRS2Q9HD23 443 aa16.47■□□□□ 0.23
STAU1-203ENST00000360426 ST20-MTHFSA0A0A6YYL1 179 aa16.46■□□□□ 0.23
STAU1-203ENST00000360426 KIF7Q2M1P5 1343 aa16.46■□□□□ 0.23
STAU1-203ENST00000360426 TIMELESSQ9UNS1 1208 aa16.45■□□□□ 0.22
STAU1-203ENST00000360426 KDM5BQ9UGL1 1544 aa16.45■□□□□ 0.22
STAU1-203ENST00000360426 NUTM2DQ5VT03 806 aaPredicted RBP16.45■□□□□ 0.22
STAU1-203ENST00000360426 CHD1O14646 1710 aa16.44■□□□□ 0.22
STAU1-203ENST00000360426 PZPP20742 1482 aa16.43■□□□□ 0.22
STAU1-203ENST00000360426 CHGAP10645 457 aaKnown RBP16.43■□□□□ 0.22
STAU1-203ENST00000360426 ARHGAP5Q13017 1502 aa16.41■□□□□ 0.22
STAU1-203ENST00000360426 DNMT1P26358 1616 aaKnown RBP16.38■□□□□ 0.21
STAU1-203ENST00000360426 SYCP2Q9BX26 1530 aa16.37■□□□□ 0.21
STAU1-203ENST00000360426 USP47Q96K76 1375 aa16.36■□□□□ 0.21
STAU1-203ENST00000360426 KIF3BO15066 747 aa16.36■□□□□ 0.21
STAU1-203ENST00000360426 PLEKHH2Q8IVE3 1493 aa16.36■□□□□ 0.21
STAU1-203ENST00000360426 ABCA8O94911 1581 aa16.35■□□□□ 0.21
STAU1-203ENST00000360426 ROCK1Q13464 1354 aa16.35■□□□□ 0.21
STAU1-203ENST00000360426 CCDC7Q96M83 1385 aa16.35■□□□□ 0.21
STAU1-203ENST00000360426 ABCC10Q5T3U5 1492 aa16.35■□□□□ 0.21
STAU1-203ENST00000360426 CYB5RLQ6IPT4 315 aa16.35■□□□□ 0.21
STAU1-203ENST00000360426 PRKRIP1Q9H875 184 aaPredicted RBP16.35■□□□□ 0.21
STAU1-203ENST00000360426 GGT6Q6P531 493 aa16.35■□□□□ 0.21
STAU1-203ENST00000360426 RPRD2Q5VT52 1461 aaKnown RBP16.35■□□□□ 0.21
STAU1-203ENST00000360426 CC2D1BQ5T0F9 858 aaKnown RBP16.34■□□□□ 0.21
STAU1-203ENST00000360426 KIAA1107Q9UPP5 1409 aa16.34■□□□□ 0.21
STAU1-203ENST00000360426 EFCAB2Q5VUJ9 269 aa16.33■□□□□ 0.2
STAU1-203ENST00000360426 TTC37Q6PGP7 1564 aa16.33■□□□□ 0.2
STAU1-203ENST00000360426 TRAPPC8Q9Y2L5 1435 aa16.32■□□□□ 0.2
STAU1-203ENST00000360426 GCC2Q8IWJ2 1684 aa16.32■□□□□ 0.2
STAU1-203ENST00000360426 CDC42BPAQ5VT25 1732 aa16.31■□□□□ 0.2
STAU1-203ENST00000360426 TEX14Q8IWB6 1497 aa16.31■□□□□ 0.2
STAU1-203ENST00000360426 PLPPR3Q6T4P5 718 aa16.31■□□□□ 0.2
STAU1-203ENST00000360426 SPAG9O60271 1321 aaKnown RBP16.31■□□□□ 0.2
STAU1-203ENST00000360426 RAPGEF3O95398 923 aa16.3■□□□□ 0.2
STAU1-203ENST00000360426 ARHGEF12Q9NZN5 1544 aa16.3■□□□□ 0.2
STAU1-203ENST00000360426 MBD5Q9P267 1494 aa16.3■□□□□ 0.2
STAU1-203ENST00000360426 ROCK2O75116 1388 aaKnown RBP16.3■□□□□ 0.2
STAU1-203ENST00000360426 NEFLP07196 543 aa16.28■□□□□ 0.2
STAU1-203ENST00000360426 SCAPERQ9BY12 1400 aa16.27■□□□□ 0.2
STAU1-203ENST00000360426 SAMD9LQ8IVG5 1584 aa16.27■□□□□ 0.19
STAU1-203ENST00000360426 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.27■□□□□ 0.19
STAU1-203ENST00000360426 NPM1P06748 294 aaKnown RBP eCLIP16.25■□□□□ 0.19
STAU1-203ENST00000360426 OSCARQ8IYS5 282 aa16.25■□□□□ 0.19
STAU1-203ENST00000360426 CCER2I3L3R5 266 aa16.24■□□□□ 0.19
STAU1-203ENST00000360426 SAFB2Q14151 953 aaKnown RBP eCLIP16.24■□□□□ 0.19
STAU1-203ENST00000360426 CCDC141Q6ZP82 1450 aa16.24■□□□□ 0.19
STAU1-203ENST00000360426 CCDC144AA2RUR9 1427 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms