RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 SENP3-EIF4A1A0A087X0R7 540 aa28.57■■■□□ 2.16
TRIM3-202ENST00000359518 ZNF326Q5BKZ1 582 aaKnown RBP28.56■■■□□ 2.16
TRIM3-202ENST00000359518 HECW1Q76N89 1606 aa28.55■■■□□ 2.16
TRIM3-202ENST00000359518 GCC2Q8IWJ2 1684 aa28.54■■■□□ 2.16
TRIM3-202ENST00000359518 KIF21AQ7Z4S6 1674 aa28.52■■■□□ 2.16
TRIM3-202ENST00000359518 B4GALNT3Q6L9W6 998 aa28.52■■■□□ 2.16
TRIM3-202ENST00000359518 KIF7Q2M1P5 1343 aa28.51■■■□□ 2.15
TRIM3-202ENST00000359518 IQGAP2Q13576 1575 aa28.51■■■□□ 2.15
TRIM3-202ENST00000359518 ANKRD30BQ9BXX2 1392 aa28.5■■■□□ 2.15
TRIM3-202ENST00000359518 MIA2Q96PC5 1412 aa28.5■■■□□ 2.15
TRIM3-202ENST00000359518 NCOA1Q15788 1441 aa28.5■■■□□ 2.15
TRIM3-202ENST00000359518 TARBP1Q13395 1621 aaKnown RBP28.48■■■□□ 2.15
TRIM3-202ENST00000359518 ZNF777Q9ULD5 760 aaPredicted RBP28.48■■■□□ 2.15
TRIM3-202ENST00000359518 AKNAQ7Z591 1439 aa28.47■■■□□ 2.15
TRIM3-202ENST00000359518 PPP4R2Q9NY27 417 aa28.47■■■□□ 2.15
TRIM3-202ENST00000359518 DAPK1P53355 1430 aa28.46■■■□□ 2.15
TRIM3-202ENST00000359518 ABCC5O15440 1437 aa28.44■■■□□ 2.14
TRIM3-202ENST00000359518 RPRD2Q5VT52 1461 aaKnown RBP28.42■■■□□ 2.14
TRIM3-202ENST00000359518 WDR62O43379 1518 aa28.42■■■□□ 2.14
TRIM3-202ENST00000359518 BCL11AQ9H165 835 aa28.4■■■□□ 2.14
TRIM3-202ENST00000359518 ERICH6Q7L0X2 663 aa28.38■■■□□ 2.13
TRIM3-202ENST00000359518 ZBED9Q6R2W3 1325 aa28.38■■■□□ 2.13
TRIM3-202ENST00000359518 PBRM1Q86U86 1689 aa28.37■■■□□ 2.13
TRIM3-202ENST00000359518 TEX14Q8IWB6 1497 aa28.37■■■□□ 2.13
TRIM3-202ENST00000359518 CFDP1Q9UEE9 299 aaPredicted RBP28.35■■■□□ 2.13
TRIM3-202ENST00000359518 ROCK1Q13464 1354 aa28.33■■■□□ 2.13
TRIM3-202ENST00000359518 ADAMTS12P58397 1594 aa28.33■■■□□ 2.13
TRIM3-202ENST00000359518 FANCIQ9NVI1 1328 aa28.33■■■□□ 2.13
TRIM3-202ENST00000359518 ZNF608Q9ULD9 1512 aaPredicted RBP28.32■■■□□ 2.12
TRIM3-202ENST00000359518 SPATA31E1Q6ZUB1 1445 aa28.32■■■□□ 2.12
TRIM3-202ENST00000359518 PRG4Q92954 1404 aaPredicted RBP28.3■■■□□ 2.12
TRIM3-202ENST00000359518 ERICH6BQ5W0A0 696 aa28.3■■■□□ 2.12
TRIM3-202ENST00000359518 PKD2Q13563 968 aa28.29■■■□□ 2.12
TRIM3-202ENST00000359518 NUP153P49790 1475 aaKnown RBP28.29■■■□□ 2.12
TRIM3-202ENST00000359518 FBLN2P98095 1184 aa28.26■■■□□ 2.11
TRIM3-202ENST00000359518 DNMT1P26358 1616 aaKnown RBP28.25■■■□□ 2.11
TRIM3-202ENST00000359518 USP47Q96K76 1375 aa28.23■■■□□ 2.11
TRIM3-202ENST00000359518 DISP1Q96F81 1524 aa28.23■■■□□ 2.11
TRIM3-202ENST00000359518 KDM2AQ9Y2K7 1162 aa28.22■■■□□ 2.11
TRIM3-202ENST00000359518 PZPP20742 1482 aa28.21■■■□□ 2.11
TRIM3-202ENST00000359518 DHX29Q7Z478 1369 aaKnown RBP28.18■■■□□ 2.1
TRIM3-202ENST00000359518 KIAA0586Q9BVV6 1533 aa28.17■■■□□ 2.1
TRIM3-202ENST00000359518 KIAA0556O60303 1618 aa28.17■■■□□ 2.1
TRIM3-202ENST00000359518 CAMSAP2Q08AD1 1489 aa28.16■■■□□ 2.1
TRIM3-202ENST00000359518 MRC2Q9UBG0 1479 aa28.15■■■□□ 2.1
TRIM3-202ENST00000359518 PLB1Q6P1J6 1458 aa28.14■■■□□ 2.1
TRIM3-202ENST00000359518 TMC1Q8TDI8 760 aa28.13■■■□□ 2.09
TRIM3-202ENST00000359518 CARD11Q9BXL7 1154 aa28.13■■■□□ 2.09
TRIM3-202ENST00000359518 RAPGEF6Q8TEU7 1601 aa28.12■■■□□ 2.09
TRIM3-202ENST00000359518 KIAA1107Q9UPP5 1409 aa28.12■■■□□ 2.09
TRIM3-202ENST00000359518 CHMP7Q8WUX9 453 aaPredicted RBP28.11■■■□□ 2.09
TRIM3-202ENST00000359518 NUDCQ9Y266 331 aa28.11■■■□□ 2.09
TRIM3-202ENST00000359518 TROQ12816 1431 aaPredicted RBP28.11■■■□□ 2.09
TRIM3-202ENST00000359518 CCDC136Q96JN2 1154 aa28.1■■■□□ 2.09
TRIM3-202ENST00000359518 BCORL1Q5H9F3 1711 aa28.09■■■□□ 2.09
TRIM3-202ENST00000359518 SALL2Q9Y467 1007 aaPredicted RBP28.09■■■□□ 2.09
TRIM3-202ENST00000359518 GPATCH8Q9UKJ3 1502 aaKnown RBP28.09■■■□□ 2.09
TRIM3-202ENST00000359518 NUP155O75694 1391 aa28.08■■■□□ 2.09
TRIM3-202ENST00000359518 ST20-MTHFSA0A0A6YYL1 179 aa28.06■■■□□ 2.08
TRIM3-202ENST00000359518 ANKRD30AQ9BXX3 1397 aa28.06■■■□□ 2.08
TRIM3-202ENST00000359518 SMG6Q86US8 1419 aaKnown RBP28.06■■■□□ 2.08
TRIM3-202ENST00000359518 PNISRQ8TF01 805 aaKnown RBP28.05■■■□□ 2.08
TRIM3-202ENST00000359518 GRIN2AQ12879 1464 aa28.04■■■□□ 2.08
TRIM3-202ENST00000359518 ANKRD50Q9ULJ7 1429 aa28.04■■■□□ 2.08
TRIM3-202ENST00000359518 DCAF11Q8TEB1 546 aa28.04■■■□□ 2.08
TRIM3-202ENST00000359518 KIF14Q15058 1648 aa28.04■■■□□ 2.08
TRIM3-202ENST00000359518 ERCC6Q03468 1493 aa28.04■■■□□ 2.08
TRIM3-202ENST00000359518 IFT140Q96RY7 1462 aa28.02■■■□□ 2.08
TRIM3-202ENST00000359518 MBD5Q9P267 1494 aa28.02■■■□□ 2.08
TRIM3-202ENST00000359518 POLR1AO95602 1720 aaPredicted RBP27.99■■■□□ 2.07
TRIM3-202ENST00000359518 PLEKHD1A6NEE1 506 aa27.98■■■□□ 2.07
TRIM3-202ENST00000359518 HNRNPMP52272 730 aaKnown RBP eCLIP27.98■■■□□ 2.07
TRIM3-202ENST00000359518 JPH4Q96JJ6 628 aa27.97■■■□□ 2.07
TRIM3-202ENST00000359518 PAK3O75914 559 aaPredicted RBP27.97■■■□□ 2.07
TRIM3-202ENST00000359518 TSPY4P0CV99 314 aa27.96■■■□□ 2.07
TRIM3-202ENST00000359518 TSPY10P0CW01 314 aa27.96■■■□□ 2.07
TRIM3-202ENST00000359518 NBR1Q14596 966 aa27.96■■■□□ 2.07
TRIM3-202ENST00000359518 KDM5CP41229 1560 aa27.92■■■□□ 2.06
TRIM3-202ENST00000359518 RGL3Q3MIN7 710 aa27.92■■■□□ 2.06
TRIM3-202ENST00000359518 NOP58Q9Y2X3 529 aaKnown RBP27.92■■■□□ 2.06
TRIM3-202ENST00000359518 ADGRL2O95490 1459 aa27.89■■■□□ 2.06
TRIM3-202ENST00000359518 RNF123Q5XPI4 1314 aa27.89■■■□□ 2.06
TRIM3-202ENST00000359518 C9orf84Q5VXU9 1444 aa27.88■■■□□ 2.05
TRIM3-202ENST00000359518 ADGBQ8N7X0 1667 aa27.88■■■□□ 2.05
TRIM3-202ENST00000359518 ARID4BQ4LE39 1312 aaPredicted RBP27.88■■■□□ 2.05
TRIM3-202ENST00000359518 KIF15Q9NS87 1388 aa27.88■■■□□ 2.05
TRIM3-202ENST00000359518 ITSN2Q9NZM3 1697 aa27.88■■■□□ 2.05
TRIM3-202ENST00000359518 EIF4G3O43432 1585 aaKnown RBP27.88■■■□□ 2.05
TRIM3-202ENST00000359518 ROCK2O75116 1388 aaKnown RBP27.85■■■□□ 2.05
TRIM3-202ENST00000359518 RALGAPBQ86X10 1494 aa27.84■■■□□ 2.05
TRIM3-202ENST00000359518 MYBBP1AQ9BQG0 1328 aaKnown RBP27.84■■■□□ 2.05
TRIM3-202ENST00000359518 CEP170Q5SW79 1584 aa27.83■■■□□ 2.05
TRIM3-202ENST00000359518 CARMIL2Q6F5E8 1435 aa27.83■■■□□ 2.05
TRIM3-202ENST00000359518 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.83■■■□□ 2.05
TRIM3-202ENST00000359518 EXOC6Q8TAG9 804 aa27.82■■■□□ 2.04
TRIM3-202ENST00000359518 NBPF1Q3BBV0 1214 aa27.81■■■□□ 2.04
TRIM3-202ENST00000359518 UHRF1BP1Q6BDS2 1440 aa27.81■■■□□ 2.04
TRIM3-202ENST00000359518 ANP32AP39687 249 aaKnown RBP27.8■■■□□ 2.04
TRIM3-202ENST00000359518 DEKP35659 375 aaKnown RBP27.79■■■□□ 2.04
TRIM3-202ENST00000359518 CROCC2H7BZ55 1655 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms