RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 SENP3-EIF4A1A0A087X0R7 540 aa28.57■■■□□ 2.16
TRIM3-202ENST00000359518 ZNF326Q5BKZ1 582 aaKnown RBP28.56■■■□□ 2.16
TRIM3-202ENST00000359518 HECW1Q76N89 1606 aa28.55■■■□□ 2.16
TRIM3-202ENST00000359518 GCC2Q8IWJ2 1684 aa28.54■■■□□ 2.16
TRIM3-202ENST00000359518 KIF21AQ7Z4S6 1674 aa28.52■■■□□ 2.16
TRIM3-202ENST00000359518 B4GALNT3Q6L9W6 998 aa28.52■■■□□ 2.16
TRIM3-202ENST00000359518 KIF7Q2M1P5 1343 aa28.51■■■□□ 2.15
TRIM3-202ENST00000359518 IQGAP2Q13576 1575 aa28.51■■■□□ 2.15
TRIM3-202ENST00000359518 ANKRD30BQ9BXX2 1392 aa28.5■■■□□ 2.15
TRIM3-202ENST00000359518 MIA2Q96PC5 1412 aa28.5■■■□□ 2.15
TRIM3-202ENST00000359518 NCOA1Q15788 1441 aa28.5■■■□□ 2.15
TRIM3-202ENST00000359518 TARBP1Q13395 1621 aaKnown RBP28.48■■■□□ 2.15
TRIM3-202ENST00000359518 ZNF777Q9ULD5 760 aaPredicted RBP28.48■■■□□ 2.15
TRIM3-202ENST00000359518 AKNAQ7Z591 1439 aa28.47■■■□□ 2.15
TRIM3-202ENST00000359518 PPP4R2Q9NY27 417 aa28.47■■■□□ 2.15
TRIM3-202ENST00000359518 DAPK1P53355 1430 aa28.46■■■□□ 2.15
TRIM3-202ENST00000359518 ABCC5O15440 1437 aa28.44■■■□□ 2.14
TRIM3-202ENST00000359518 RPRD2Q5VT52 1461 aaKnown RBP28.42■■■□□ 2.14
TRIM3-202ENST00000359518 WDR62O43379 1518 aa28.42■■■□□ 2.14
TRIM3-202ENST00000359518 BCL11AQ9H165 835 aa28.4■■■□□ 2.14
TRIM3-202ENST00000359518 ERICH6Q7L0X2 663 aa28.38■■■□□ 2.13
TRIM3-202ENST00000359518 ZBED9Q6R2W3 1325 aa28.38■■■□□ 2.13
TRIM3-202ENST00000359518 PBRM1Q86U86 1689 aa28.37■■■□□ 2.13
TRIM3-202ENST00000359518 TEX14Q8IWB6 1497 aa28.37■■■□□ 2.13
TRIM3-202ENST00000359518 CFDP1Q9UEE9 299 aaPredicted RBP28.35■■■□□ 2.13
TRIM3-202ENST00000359518 ROCK1Q13464 1354 aa28.33■■■□□ 2.13
TRIM3-202ENST00000359518 ADAMTS12P58397 1594 aa28.33■■■□□ 2.13
TRIM3-202ENST00000359518 FANCIQ9NVI1 1328 aa28.33■■■□□ 2.13
TRIM3-202ENST00000359518 ZNF608Q9ULD9 1512 aaPredicted RBP28.32■■■□□ 2.12
TRIM3-202ENST00000359518 SPATA31E1Q6ZUB1 1445 aa28.32■■■□□ 2.12
TRIM3-202ENST00000359518 PRG4Q92954 1404 aaPredicted RBP28.3■■■□□ 2.12
TRIM3-202ENST00000359518 ERICH6BQ5W0A0 696 aa28.3■■■□□ 2.12
TRIM3-202ENST00000359518 PKD2Q13563 968 aa28.29■■■□□ 2.12
TRIM3-202ENST00000359518 NUP153P49790 1475 aaKnown RBP28.29■■■□□ 2.12
TRIM3-202ENST00000359518 FBLN2P98095 1184 aa28.26■■■□□ 2.11
TRIM3-202ENST00000359518 DNMT1P26358 1616 aaKnown RBP28.25■■■□□ 2.11
TRIM3-202ENST00000359518 USP47Q96K76 1375 aa28.23■■■□□ 2.11
TRIM3-202ENST00000359518 DISP1Q96F81 1524 aa28.23■■■□□ 2.11
TRIM3-202ENST00000359518 KDM2AQ9Y2K7 1162 aa28.22■■■□□ 2.11
TRIM3-202ENST00000359518 PZPP20742 1482 aa28.21■■■□□ 2.11
TRIM3-202ENST00000359518 DHX29Q7Z478 1369 aaKnown RBP28.18■■■□□ 2.1
TRIM3-202ENST00000359518 KIAA0586Q9BVV6 1533 aa28.17■■■□□ 2.1
TRIM3-202ENST00000359518 KIAA0556O60303 1618 aa28.17■■■□□ 2.1
TRIM3-202ENST00000359518 CAMSAP2Q08AD1 1489 aa28.16■■■□□ 2.1
TRIM3-202ENST00000359518 MRC2Q9UBG0 1479 aa28.15■■■□□ 2.1
TRIM3-202ENST00000359518 PLB1Q6P1J6 1458 aa28.14■■■□□ 2.1
TRIM3-202ENST00000359518 TMC1Q8TDI8 760 aa28.13■■■□□ 2.09
TRIM3-202ENST00000359518 CARD11Q9BXL7 1154 aa28.13■■■□□ 2.09
TRIM3-202ENST00000359518 RAPGEF6Q8TEU7 1601 aa28.12■■■□□ 2.09
TRIM3-202ENST00000359518 KIAA1107Q9UPP5 1409 aa28.12■■■□□ 2.09
TRIM3-202ENST00000359518 CHMP7Q8WUX9 453 aaPredicted RBP28.11■■■□□ 2.09
TRIM3-202ENST00000359518 NUDCQ9Y266 331 aa28.11■■■□□ 2.09
TRIM3-202ENST00000359518 TROQ12816 1431 aaPredicted RBP28.11■■■□□ 2.09
TRIM3-202ENST00000359518 CCDC136Q96JN2 1154 aa28.1■■■□□ 2.09
TRIM3-202ENST00000359518 BCORL1Q5H9F3 1711 aa28.09■■■□□ 2.09
TRIM3-202ENST00000359518 SALL2Q9Y467 1007 aaPredicted RBP28.09■■■□□ 2.09
TRIM3-202ENST00000359518 GPATCH8Q9UKJ3 1502 aaKnown RBP28.09■■■□□ 2.09
TRIM3-202ENST00000359518 NUP155O75694 1391 aa28.08■■■□□ 2.09
TRIM3-202ENST00000359518 ST20-MTHFSA0A0A6YYL1 179 aa28.06■■■□□ 2.08
TRIM3-202ENST00000359518 ANKRD30AQ9BXX3 1397 aa28.06■■■□□ 2.08
TRIM3-202ENST00000359518 SMG6Q86US8 1419 aaKnown RBP28.06■■■□□ 2.08
TRIM3-202ENST00000359518 PNISRQ8TF01 805 aaKnown RBP28.05■■■□□ 2.08
TRIM3-202ENST00000359518 GRIN2AQ12879 1464 aa28.04■■■□□ 2.08
TRIM3-202ENST00000359518 ANKRD50Q9ULJ7 1429 aa28.04■■■□□ 2.08
TRIM3-202ENST00000359518 DCAF11Q8TEB1 546 aa28.04■■■□□ 2.08
TRIM3-202ENST00000359518 KIF14Q15058 1648 aa28.04■■■□□ 2.08
TRIM3-202ENST00000359518 ERCC6Q03468 1493 aa28.04■■■□□ 2.08
TRIM3-202ENST00000359518 IFT140Q96RY7 1462 aa28.02■■■□□ 2.08
TRIM3-202ENST00000359518 MBD5Q9P267 1494 aa28.02■■■□□ 2.08
TRIM3-202ENST00000359518 POLR1AO95602 1720 aaPredicted RBP27.99■■■□□ 2.07
TRIM3-202ENST00000359518 PLEKHD1A6NEE1 506 aa27.98■■■□□ 2.07
TRIM3-202ENST00000359518 HNRNPMP52272 730 aaKnown RBP eCLIP27.98■■■□□ 2.07
TRIM3-202ENST00000359518 JPH4Q96JJ6 628 aa27.97■■■□□ 2.07
TRIM3-202ENST00000359518 PAK3O75914 559 aaPredicted RBP27.97■■■□□ 2.07
TRIM3-202ENST00000359518 TSPY4P0CV99 314 aa27.96■■■□□ 2.07
TRIM3-202ENST00000359518 TSPY10P0CW01 314 aa27.96■■■□□ 2.07
TRIM3-202ENST00000359518 NBR1Q14596 966 aa27.96■■■□□ 2.07
TRIM3-202ENST00000359518 KDM5CP41229 1560 aa27.92■■■□□ 2.06
TRIM3-202ENST00000359518 RGL3Q3MIN7 710 aa27.92■■■□□ 2.06
TRIM3-202ENST00000359518 NOP58Q9Y2X3 529 aaKnown RBP27.92■■■□□ 2.06
TRIM3-202ENST00000359518 ADGRL2O95490 1459 aa27.89■■■□□ 2.06
TRIM3-202ENST00000359518 RNF123Q5XPI4 1314 aa27.89■■■□□ 2.06
TRIM3-202ENST00000359518 C9orf84Q5VXU9 1444 aa27.88■■■□□ 2.05
TRIM3-202ENST00000359518 ADGBQ8N7X0 1667 aa27.88■■■□□ 2.05
TRIM3-202ENST00000359518 ARID4BQ4LE39 1312 aaPredicted RBP27.88■■■□□ 2.05
TRIM3-202ENST00000359518 KIF15Q9NS87 1388 aa27.88■■■□□ 2.05
TRIM3-202ENST00000359518 ITSN2Q9NZM3 1697 aa27.88■■■□□ 2.05
TRIM3-202ENST00000359518 EIF4G3O43432 1585 aaKnown RBP27.88■■■□□ 2.05
TRIM3-202ENST00000359518 ROCK2O75116 1388 aaKnown RBP27.85■■■□□ 2.05
TRIM3-202ENST00000359518 RALGAPBQ86X10 1494 aa27.84■■■□□ 2.05
TRIM3-202ENST00000359518 MYBBP1AQ9BQG0 1328 aaKnown RBP27.84■■■□□ 2.05
TRIM3-202ENST00000359518 CEP170Q5SW79 1584 aa27.83■■■□□ 2.05
TRIM3-202ENST00000359518 CARMIL2Q6F5E8 1435 aa27.83■■■□□ 2.05
TRIM3-202ENST00000359518 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.83■■■□□ 2.05
TRIM3-202ENST00000359518 EXOC6Q8TAG9 804 aa27.82■■■□□ 2.04
TRIM3-202ENST00000359518 NBPF1Q3BBV0 1214 aa27.81■■■□□ 2.04
TRIM3-202ENST00000359518 UHRF1BP1Q6BDS2 1440 aa27.81■■■□□ 2.04
TRIM3-202ENST00000359518 ANP32AP39687 249 aaKnown RBP27.8■■■□□ 2.04
TRIM3-202ENST00000359518 DEKP35659 375 aaKnown RBP27.79■■■□□ 2.04
TRIM3-202ENST00000359518 CROCC2H7BZ55 1655 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms