RNA–Protein interactions for RNA: ENST00000359237.8

PLAC1-201, Transcript of placenta specific 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLAC1, Length 1,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLAC1-201ENST00000359237 SYNJ1O43426 1573 aa11.65□□□□□ -0.54
PLAC1-201ENST00000359237 TOP2BQ02880 1626 aa11.64□□□□□ -0.55
PLAC1-201ENST00000359237 TDRD9Q8NDG6 1382 aaKnown RBP11.64□□□□□ -0.55
PLAC1-201ENST00000359237 WDR97A6NE52 1622 aa11.63□□□□□ -0.55
PLAC1-201ENST00000359237 OCEL1Q9H607 264 aa11.61□□□□□ -0.55
PLAC1-201ENST00000359237 IRX5P78411 483 aaPredicted RBP11.6□□□□□ -0.55
PLAC1-201ENST00000359237 CHD1O14646 1710 aa11.58□□□□□ -0.56
PLAC1-201ENST00000359237 ABCA10Q8WWZ4 1543 aa11.58□□□□□ -0.56
PLAC1-201ENST00000359237 PBRM1Q86U86 1689 aa11.58□□□□□ -0.56
PLAC1-201ENST00000359237 IFNL1Q8IU54 200 aa11.57□□□□□ -0.56
PLAC1-201ENST00000359237 ABCA5Q8WWZ7 1642 aa11.56□□□□□ -0.56
PLAC1-201ENST00000359237 GRIN2BQ13224 1484 aa11.56□□□□□ -0.56
PLAC1-201ENST00000359237 GAPVD1Q14C86 1478 aa11.56□□□□□ -0.56
PLAC1-201ENST00000359237 SNAPC4Q5SXM2 1469 aa11.56□□□□□ -0.56
PLAC1-201ENST00000359237 HS3ST6Q96QI5 342 aa11.55□□□□□ -0.56
PLAC1-201ENST00000359237 MAGI1Q96QZ7 1491 aaPredicted RBP11.53□□□□□ -0.56
PLAC1-201ENST00000359237 FAM205CA6NFA0 338 aa11.53□□□□□ -0.56
PLAC1-201ENST00000359237 KRTAP3-3Q9BYR6 98 aa11.53□□□□□ -0.56
PLAC1-201ENST00000359237 KRTAP3-2Q9BYR7 98 aa11.53□□□□□ -0.56
PLAC1-201ENST00000359237 C3orf67Q6ZVT6 689 aa11.52□□□□□ -0.57
PLAC1-201ENST00000359237 ZBTB47Q9UFB7 747 aaPredicted RBP11.51□□□□□ -0.57
PLAC1-201ENST00000359237 CHMP7Q8WUX9 453 aaPredicted RBP11.5□□□□□ -0.57
PLAC1-201ENST00000359237 PLCD3Q8N3E9 789 aa11.48□□□□□ -0.57
PLAC1-201ENST00000359237 SYNJ2O15056 1496 aa11.48□□□□□ -0.57
PLAC1-201ENST00000359237 PROM2Q8N271 834 aa11.47□□□□□ -0.57
PLAC1-201ENST00000359237 CSRNP3Q8WYN3 585 aa11.46□□□□□ -0.57
PLAC1-201ENST00000359237 FAM212AQ96EL1 285 aa11.46□□□□□ -0.57
PLAC1-201ENST00000359237 ADAMTS12P58397 1594 aa11.45□□□□□ -0.58
PLAC1-201ENST00000359237 ERICH3Q5RHP9 1530 aa11.45□□□□□ -0.58
PLAC1-201ENST00000359237 RIMBP3CA6NJZ7 1639 aa11.43□□□□□ -0.58
PLAC1-201ENST00000359237 RIMBP3BA6NNM3 1639 aa11.43□□□□□ -0.58
PLAC1-201ENST00000359237 RIMBP3Q9UFD9 1639 aa11.43□□□□□ -0.58
PLAC1-201ENST00000359237 RNF166Q96A37 237 aaPredicted RBP11.43□□□□□ -0.58
PLAC1-201ENST00000359237 L3MBTL3Q96JM7 780 aaPredicted RBP11.43□□□□□ -0.58
PLAC1-201ENST00000359237 FHAD1B1AJZ9 1412 aa11.42□□□□□ -0.58
PLAC1-201ENST00000359237 KIF27Q86VH2 1401 aa11.42□□□□□ -0.58
PLAC1-201ENST00000359237 GRIN2AQ12879 1464 aa11.41□□□□□ -0.58
PLAC1-201ENST00000359237 ARHGEF11O15085 1522 aa11.4□□□□□ -0.58
PLAC1-201ENST00000359237 CLASP1Q7Z460 1538 aa11.4□□□□□ -0.58
PLAC1-201ENST00000359237 POTEB3A0JP26 581 aa11.4□□□□□ -0.58
PLAC1-201ENST00000359237 POTEBQ6S5H4 581 aa11.4□□□□□ -0.58
PLAC1-201ENST00000359237 TRIM41Q8WV44 630 aa11.4□□□□□ -0.58
PLAC1-201ENST00000359237 CUL7Q14999 1698 aa11.37□□□□□ -0.59
PLAC1-201ENST00000359237 CEP170Q5SW79 1584 aa11.37□□□□□ -0.59
PLAC1-201ENST00000359237 NUBP1P53384 320 aa11.36□□□□□ -0.59
PLAC1-201ENST00000359237 GOLGA2Q08379 1002 aa11.36□□□□□ -0.59
PLAC1-201ENST00000359237 IGF1RP08069 1367 aa11.35□□□□□ -0.59
PLAC1-201ENST00000359237 NUP160Q12769 1436 aa11.34□□□□□ -0.59
PLAC1-201ENST00000359237 RUSC2Q8N2Y8 1516 aa11.32□□□□□ -0.6
PLAC1-201ENST00000359237 MKRN3Q13064 507 aaKnown RBP11.31□□□□□ -0.6
PLAC1-201ENST00000359237 CYB5RLQ6IPT4 315 aa11.31□□□□□ -0.6
PLAC1-201ENST00000359237 MYT1LQ9UL68 1186 aa11.31□□□□□ -0.6
PLAC1-201ENST00000359237 ARAP1Q96P48 1450 aa11.31□□□□□ -0.6
PLAC1-201ENST00000359237 CARMIL1Q5VZK9 1371 aa11.3□□□□□ -0.6
PLAC1-201ENST00000359237 ZNF710Q8N1W2 664 aa11.29□□□□□ -0.6
PLAC1-201ENST00000359237 SHROOM2Q13796 1616 aa11.28□□□□□ -0.6
PLAC1-201ENST00000359237 ERBB3P21860 1342 aa11.28□□□□□ -0.6
PLAC1-201ENST00000359237 PDCD7Q8N8D1 485 aaKnown RBP11.27□□□□□ -0.61
PLAC1-201ENST00000359237 ERCC6L2Q5T890 1561 aa11.27□□□□□ -0.61
PLAC1-201ENST00000359237 DCAF8Q5TAQ9 597 aa11.25□□□□□ -0.61
PLAC1-201ENST00000359237 G3V3G9 751 aa11.24□□□□□ -0.61
PLAC1-201ENST00000359237 PYGBP11216 843 aa11.24□□□□□ -0.61
PLAC1-201ENST00000359237 JPH4Q96JJ6 628 aa11.24□□□□□ -0.61
PLAC1-201ENST00000359237 PRG4Q92954 1404 aaPredicted RBP11.24□□□□□ -0.61
PLAC1-201ENST00000359237 RAPGEF2Q9Y4G8 1499 aa11.24□□□□□ -0.61
PLAC1-201ENST00000359237 KIAA0586Q9BVV6 1533 aa11.24□□□□□ -0.61
PLAC1-201ENST00000359237 PCDHB8Q9UN66 801 aa11.23□□□□□ -0.61
PLAC1-201ENST00000359237 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.22□□□□□ -0.61
PLAC1-201ENST00000359237 HOXB1P14653 301 aaPredicted RBP11.2□□□□□ -0.62
PLAC1-201ENST00000359237 PTGER2P43116 358 aa11.2□□□□□ -0.62
PLAC1-201ENST00000359237 IQGAP2Q13576 1575 aa11.2□□□□□ -0.62
PLAC1-201ENST00000359237 FAM9AQ8IZU1 332 aaPredicted RBP11.19□□□□□ -0.62
PLAC1-201ENST00000359237 CTTNBP2Q8WZ74 1663 aa11.18□□□□□ -0.62
PLAC1-201ENST00000359237 DOK7Q18PE1 504 aa11.18□□□□□ -0.62
PLAC1-201ENST00000359237 PRXQ9BXM0 1461 aa11.18□□□□□ -0.62
PLAC1-201ENST00000359237 EEA1Q15075 1411 aa11.18□□□□□ -0.62
PLAC1-201ENST00000359237 RIMBP2O15034 1052 aa11.17□□□□□ -0.62
PLAC1-201ENST00000359237 ZNF467Q7Z7K2 595 aaPredicted RBP11.14□□□□□ -0.63
PLAC1-201ENST00000359237 CARMIL2Q6F5E8 1435 aa11.14□□□□□ -0.63
PLAC1-201ENST00000359237 TTBK1Q5TCY1 1321 aaPredicted RBP11.13□□□□□ -0.63
PLAC1-201ENST00000359237 VARS2Q5ST30 1063 aaKnown RBP11.13□□□□□ -0.63
PLAC1-201ENST00000359237 HOXB3P14651 431 aaPredicted RBP11.12□□□□□ -0.63
PLAC1-201ENST00000359237 UGGT2Q9NYU1 1516 aa11.11□□□□□ -0.63
PLAC1-201ENST00000359237 PTPRGP23470 1445 aa11.09□□□□□ -0.63
PLAC1-201ENST00000359237 DISP1Q96F81 1524 aa11.09□□□□□ -0.63
PLAC1-201ENST00000359237 KIAA0556O60303 1618 aa11.09□□□□□ -0.63
PLAC1-201ENST00000359237 TNIKQ9UKE5 1360 aa11.09□□□□□ -0.63
PLAC1-201ENST00000359237 KIF21BO75037 1637 aa11.08□□□□□ -0.64
PLAC1-201ENST00000359237 ADCY10Q96PN6 1610 aa11.08□□□□□ -0.64
PLAC1-201ENST00000359237 EHMT2Q96KQ7 1210 aa11.07□□□□□ -0.64
PLAC1-201ENST00000359237 GOLGA3Q08378 1498 aa11.06□□□□□ -0.64
PLAC1-201ENST00000359237 ZNF687Q8N1G0 1237 aa11.06□□□□□ -0.64
PLAC1-201ENST00000359237 BOLA1Q9Y3E2 137 aa11.06□□□□□ -0.64
PLAC1-201ENST00000359237 RANGAP1P46060 587 aaPredicted RBP11.04□□□□□ -0.64
PLAC1-201ENST00000359237 P3H3Q8IVL6 736 aa11.02□□□□□ -0.65
PLAC1-201ENST00000359237 UACAQ9BZF9 1416 aa11.01□□□□□ -0.65
PLAC1-201ENST00000359237 UBTFP17480 764 aaKnown RBP11.01□□□□□ -0.65
PLAC1-201ENST00000359237 PSEN1P49768 467 aa11.01□□□□□ -0.65
PLAC1-201ENST00000359237 ANKRD13DQ6ZTN6 518 aa11.01□□□□□ -0.65
PLAC1-201ENST00000359237 ABCC2Q92887 1545 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms